LOCUS       NM_027324               2811 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  Mus musculus sideroflexin 1 (Sfxn1), mRNA.
ACCESSION   NM_027324
VERSION     NM_027324.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2811)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   3  (bases 1 to 2811)
  AUTHORS   Fowler,S.L., Akins,M., Zhou,H., Figeys,D. and Bennett,S.A.
  TITLE     The liver connexin32 interactome is a novel plasma
            membrane-mitochondrial signaling nexus
  JOURNAL   J Proteome Res 12 (6), 2597-2610 (2013)
   PUBMED   23590695
  REMARK    GeneRIF: Connexin32 interacts with connexin26 and the mitochondrial
            protein, sideroflexin-1, at the plasma membrane forming a novel
            signaling nexus.
REFERENCE   4  (bases 1 to 2811)
  AUTHORS   Nakahara,M., Tateyama,H., Araki,M., Nakagata,N., Yamamura,K. and
            Araki,K.
  TITLE     Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from
            MSM/Ms mice
  JOURNAL   Mamm Genome 24 (5-6), 228-239 (2013)
   PUBMED   23604909
REFERENCE   5  (bases 1 to 2811)
  AUTHORS   Pei,L., Leblanc,M., Barish,G., Atkins,A., Nofsinger,R., Whyte,J.,
            Gold,D., He,M., Kawamura,K., Li,H.R., Downes,M., Yu,R.T.,
            Powell,H.C., Lingrel,J.B. and Evans,R.M.
  TITLE     Thyroid hormone receptor repression is linked to type I
            pneumocyte-associated respiratory distress syndrome
  JOURNAL   Nat Med 17 (11), 1466-1472 (2011)
   PUBMED   22001906
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 2811)
  AUTHORS   Russell,E.S.
  TITLE     Hereditary anemias of the mouse: a review for geneticists
  JOURNAL   Adv Genet 20, 357-459 (1979)
   PUBMED   390999
  REMARK    Review article
REFERENCE   7  (bases 1 to 2811)
  AUTHORS   Chui,D.H., Sweeney,G.D., Patterson,M. and Russell,E.S.
  TITLE     Hemoglobin synthesis in siderocytes of flexed-tailed mutant (f/f)
            fetal mice
  JOURNAL   Blood 50 (1), 165-177 (1977)
   PUBMED   559515
REFERENCE   8  (bases 1 to 2811)
  AUTHORS   Cole,R.J. and Regan,T.
  TITLE     Haemopoietic progenitor cells in prenatal congenitally anaemic
            'flexed-tailed' (f/f) mice
  JOURNAL   Br J Haematol 33 (3), 387-394 (1976)
   PUBMED   1276083
REFERENCE   9  (bases 1 to 2811)
  AUTHORS   Cole,R.J., Garlick,J. and Cheek,E.M.
  TITLE     Activities of haem synthetic enzymes in blood cells of pre-natal
            flexed-tailed (f/f) anaemic mice
  JOURNAL   J Embryol Exp Morphol 34 (2), 373-386 (1975)
   PUBMED   1194836
REFERENCE   10 (bases 1 to 2811)
  AUTHORS   Gregory,C.J., McCulloch,E.A. and Till,J.E.
  TITLE     The cellular basis for the defect in haemopoiesis in flexed-tailed
            mice. III. Restriction of the defect to erythropoietic progenitors
            capable of transient colony formation in vivo
  JOURNAL   Br J Haematol 30 (4), 401-410 (1975)
   PUBMED   1201223
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT030176.18, AK151110.1 and AC163343.2.
            
            [WARNING] On Mar 18, 2024 this sequence was replaced by
            NM_027324.6.
            
            On Oct 20, 2009 this sequence version replaced NM_027324.4.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF325260.1, AK012650.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-55                CT030176.18        206443-206497
            56-1228             AK151110.1         2-1174
            1229-2811           AC163343.2         67683-69265
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 28.4 cM"
     gene            1..2811
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /note="sideroflexin 1"
                     /db_xref="GeneID:14057"
                     /db_xref="MGI:MGI:2137677"
     exon            1..88
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            89..263
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..1068
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /note="flexed tail"
                     /codon_start=1
                     /product="sideroflexin-1"
                     /protein_id="NP_081600.1"
                     /db_xref="CCDS:CCDS26525.1"
                     /db_xref="GeneID:14057"
                     /db_xref="MGI:MGI:2137677"
                     /translation="MSGEVPPNINIKEPRWDQSTFIGRASHFFTVTDPRNILLTNEQL
                     ENARKVVHDYRQGIVPAGLTENELWRAKYAYDSAFHPDTGEKMTLIGRMSAQVPMNMT
                     ITGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVA
                     TALGLNALTKRVSPLIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGTRLGES
                     TNAAKQAITQVVISRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVTLVGFCL
                     VFATPLCCALFPQKSSMSVTSLEDELQASIQRTHPEIRRVYFNKGL"
     exon            264..434
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            435..533
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            534..609
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            610..695
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            696..823
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            824..873
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            874..923
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            924..971
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            972..2811
                     /gene="Sfxn1"
                     /gene_synonym="2810002O05Rik; A930015P12Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggggcggcg cgcggggccg cggcgcttcc ggcagctgga ggcggcgccg aacgggaccg
       61 agcggcgcgg gtggcggccg ggtaggcgga tctgggacga tgtctgggga agtgccaccc
      121 aacattaaca tcaaggagcc tcgatgggac cagagcacgt tcattggccg agccagtcac
      181 ttcttcacgg ttactgatcc cagaaatatc cttttaacga acgaacagct agagaatgcg
      241 aggaaagtgg tgcatgacta caggcaagga atcgttcctg ccggcctcac ggaaaatgag
      301 ctatggagag cgaagtacgc gtacgactcg gccttccatc ctgacaccgg tgaaaagatg
      361 actctgatag gaagaatgtc agctcaggtc ccgatgaaca tgaccatcac aggctgcatg
      421 atgaccttct accggaccac accggctgtg cttttctggc agtggataaa ccagtccttc
      481 aatgccgtgg tcaactacac caacagaagc ggtgacgctc ccctcactgt gaatgagctg
      541 ggaacggctt atgtttctgc aaccactggc gctgtggcaa cggccctagg actcaatgcc
      601 ttaaccaagc gtgtctcccc actgatagga cgttttgttc ccttcgctgc tgtagctgct
      661 gctaactgca ttaacatccc actgatgaga caaagggagc tgaaggttgg tattcctgtc
      721 actgatgaaa atggcactcg cttgggagaa tcgaccaacg cagcaaagca agccatcacg
      781 caggtggtca tctccaggat cctcatggca gccccgggca tggccatccc tccgtttatc
      841 atgaacacct tggaaaagaa agccttttta aagaggttcc cgtggatgag tgcgccaatc
      901 caagtcacgt tggttggctt ttgtttggta ttcgccaccc ccctgtgctg tgctctgttt
      961 cctcagaaga gttccatgtc tgtgacaagc ttggaggatg agttgcaagc cagcatccaa
     1021 aggactcatc ctgaaatacg gcgtgtgtac tttaacaagg gcctgtgaag ccaagatcaa
     1081 gtgctggagg ccggagccat ctgtgagcct ccctaagcca cagcagtgag gagatttgtg
     1141 tgctggggca ctcaaaagcc tctacaagat cttcgttaag agtcaagctg ccggtcagga
     1201 gtctgacatt tgaatcgtgt tgtgatttac aaaaaaaaaa aaaaaaaacc cttctggtag
     1261 attttaatga tgccattttt ccaaagcccc cactgtaagg tttcaaaagc actggtaggc
     1321 atagcataga tgttccagtt acacactcag taaacactgg ttatcagtca ttggaaaggt
     1381 tacctgtgca accaccagat tccatttcta cttctcttcc ccagaggtct cagcaatgaa
     1441 tcgggaagac acgaaaggtc taagactaaa tatccaaatt ataaatacta aggaaacttt
     1501 gtttccagtt tggcaatgat ccagtctaaa gtagaacctc aatttaaaag attgaggttc
     1561 agagcatcaa cactccatac acctccccaa gtcagccata gactgttttt tttttcagaa
     1621 gtgaaaccat agtccctata tgcctctttt ttccccctct ttttttttcc atccttatag
     1681 aattctccct gctttcagga agatacaaag aaaccacatg aactagacca gcatctgtga
     1741 acattgtgct atgttccacc ttgtttgaaa actgtgaaac agtgtggcat gccaacatct
     1801 ctatagtgat ttttacacgt gatgtattcg gtgtagctga ggtcactttg gaagtctgtg
     1861 gctgttccat gtcctaggca agccacttgt taaccctgag tgacaatctt tataaatcat
     1921 tgttaattca gagatttgta cgtgagaaaa caacaacaaa attagagact atctagtttc
     1981 tgtaggttat ttttcccaat aatgtttcca gatcgaattt cctcatagag aaaaaaaaaa
     2041 aggtgtgcct tgtgtctgtg cttctccgct ctctgaaagg atggatggat ctgaagttct
     2101 cagccctcac cccacactgc tggaatcttc tgtagagctg cctgccaagc cacctgaaac
     2161 acagtggctc cctgtgacac tcaggcctca gatgagcctc gcttgccttc actgcttctg
     2221 ttttaaacag tagtaaaaaa ctggcgttca aggcagagtc cacaggtgct taaaggacac
     2281 tttcagaaga agctgaaggc cttgaggtct gcccacccag ctgatctcgg agtcctggcc
     2341 ccagtccatg tgtagctcta agaacatgaa gtagctggtt gcaagatgga ccaactcacc
     2401 aagtgtcagc ccaggtagtg agaaacttgc agtagacatg gagctgggct cttttaaatt
     2461 tgttttgtga agtttcagcc tcttaatgct tttgtatagg aatactcact gtgtggttta
     2521 atcatgattt attaaaaaaa aaaaaaaaag aacaaatgaa cgaaaattgg caatctttgc
     2581 tgatcttcta aaaatacttt ttttttcctg aagaaaaaaa aagccacacg aagtgcaata
     2641 gggttgtgcg gcgactcatt gatatttctc tgatgtgaga tagagctgtg tgtgtgtgac
     2701 tggctagcag ctatcagtat tagcgaggtg tcttgccgat atcagagtca gtgtgtcatt
     2761 tcagtttaac tggatgaact gtcaaataaa gaaatgcaga atgaaaacaa a
//
