LOCUS       NM_134114               1048 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus SFT2 domain containing 1 (Sft2d1), transcript variant
            1, mRNA.
ACCESSION   NM_134114 XM_001471593
VERSION     NM_134114.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1048)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CAAA01222630.1 and AK151338.1.
            
            On or before Sep 17, 2008 this sequence version replaced
            XM_001471593.1, NM_134114.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091770.1, AK151338.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-70                CAAA01222630.1     4149-4218
            71-669              AK151338.1         2-600
            670-1048            CAAA01222630.1     20111-20489
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 4.92 cM"
     gene            1..1048
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /note="SFT2 domain containing 1"
                     /db_xref="GeneID:106489"
                     /db_xref="MGI:MGI:1918689"
     exon            1..183
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..600
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     vesicle transport protein SFT2A; SFT2 domain-containing
                     protein 1"
                     /codon_start=1
                     /product="vesicle transport protein SFT2A isoform 1"
                     /protein_id="NP_598875.2"
                     /db_xref="CCDS:CCDS49945.1"
                     /db_xref="GeneID:106489"
                     /db_xref="MGI:MGI:1918689"
                     /translation="MEKLRRVLSGQDDEEQGLTAQVLDASSLSFNTRLKWFVICFVAG
                     IFFSFLGTGLLWLPNGMKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATI
                     IMLLCLVFTLCAALWWRKKGLALLFCILQFLSMTWYSLSYIPYARDAVLKCCSSLLG"
     exon            184..270
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            271..353
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            354..435
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            436..471
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            472..530
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            531..560
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            561..1048
                     /gene="Sft2d1"
                     /gene_synonym="5630401J11Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttgaaggaa gcggaagtcc ggatttccgg ccggcgcttg aaggtgcgga ttccgggctt
       61 ccgggtgggc gtgggggccg gacgagctag gggtcggcgg cgtggcaaga ggacagggct
      121 atggagaagc tgcggcgcgt cttgagcggc caggacgacg aggagcaagg cctgacggcg
      181 caggtcctgg atgcctcatc cctgagtttc aacaccaggt tgaagtggtt tgtcatatgc
      241 tttgttgctg gcattttctt ttcattcctt ggaacggggt tgctatggct tcccaatggc
      301 atgaaactct ttgcagtatt ttacaccctt ggaaaccttg ctgcattggc cagtacatgc
      361 tttttaatgg gacctgtgaa gcaactgaag aaaatgtttg aaacaacaag attgcttgca
      421 acaattatta tgcttttgtg cctggtattt accctgtgtg ctgctctgtg gtggcggaag
      481 aaggggctgg ccttactctt ctgcatattg cagttcttgt cgatgacctg gtacagtctg
      541 tcctacatcc cgtatgcaag ggacgcggtg ctcaagtgct gctcctcact cttgggttga
      601 aagtcgcagg agcccaggag gagtgcttgg gaacagtgct gatgcggtgc ctgctccagt
      661 gatcgcctca gaagcagcag cagcagcagc ctcagcccat gccatggacc gctgcacctc
      721 actgcacggc cctccattcc ctgcccgcta acctctgctt ccaaagacag gagggcgtaa
      781 tcattgccac ttgtaaataa gttttactca gtttttagtc tttacaaaca gcttttgaaa
      841 tgtgaatatt taaggtataa acctgtgttg taagatatat ccagcttatt tggcttttta
      901 aatgctctac aactttaaaa gaattttttt ttaactttaa aaatgtgaaa ctttatatac
      961 ttcaagctta aaattactta ttaagtgtaa taaaaaagta atatatgtat ctttacagtt
     1021 ttgaaataaa ctactcttgg aaatgtaa
//
