LOCUS       NM_013651               1674 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus splicing factor 3a, subunit 2 (Sf3a2), mRNA.
ACCESSION   NM_013651
VERSION     NM_013651.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Jin,L., Chen,Y., Crossman,D.K., Datta,A., Vu,T., Mobley,J.A.,
            Basu,M.K., Scarduzio,M., Wang,H., Chang,C. and Datta,P.K.
  TITLE     STRAP regulates alternative splicing fidelity during lineage
            commitment of mouse embryonic stem cells
  JOURNAL   Nat Commun 11 (1), 5941 (2020)
   PUBMED   33230114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Maitra,R. and Sadofsky,M.J.
  TITLE     A WW-like module in the RAG1 N-terminal domain contributes to
            previously unidentified protein-protein interactions
  JOURNAL   Nucleic Acids Res 37 (10), 3301-3309 (2009)
   PUBMED   19324890
REFERENCE   3  (bases 1 to 1674)
  AUTHORS   Pessa,H.K., Will,C.L., Meng,X., Schneider,C., Watkins,N.J.,
            Perala,N., Nymark,M., Turunen,J.J., Luhrmann,R. and Frilander,M.J.
  TITLE     Minor spliceosome components are predominantly localized in the
            nucleus
  JOURNAL   Proc Natl Acad Sci U S A 105 (25), 8655-8660 (2008)
   PUBMED   18559850
REFERENCE   4  (bases 1 to 1674)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   5  (bases 1 to 1674)
  AUTHORS   Dresser,D.W., Jamin,S.P., Atkins,C.J. and Guerrier,D.
  TITLE     An expressed GNRP-like gene shares a bi-directional promoter with
            SF3A2 (SAP62) immediately upstream of AMH
  JOURNAL   Gene 277 (1-2), 163-173 (2001)
   PUBMED   11602354
REFERENCE   6  (bases 1 to 1674)
  AUTHORS   Puttagunta,R., Gordon,L.A., Meyer,G.E., Kapfhamer,D.,
            Lamerdin,J.E., Kantheti,P., Portman,K.M., Chung,W.K., Jenne,D.E.,
            Olsen,A.S. and Burmeister,M.
  TITLE     Comparative maps of human 19p13.3 and mouse chromosome 10 allow
            identification of sequences at evolutionary breakpoints
  JOURNAL   Genome Res 10 (9), 1369-1380 (2000)
   PUBMED   10984455
REFERENCE   7  (bases 1 to 1674)
  AUTHORS   Odorisio,T., Mahadevaiah,S.K., McCarrey,J.R. and Burgoyne,P.S.
  TITLE     Transcriptional analysis of the candidate spermatogenesis gene
            Ube1y and of the closely related Ube1x shows that they are
            coexpressed in spermatogonia and spermatids but are repressed in
            pachytene spermatocytes
  JOURNAL   Dev Biol 180 (1), 336-343 (1996)
   PUBMED   8948595
REFERENCE   8  (bases 1 to 1674)
  AUTHORS   Swain,A., Zanaria,E., Hacker,A., Lovell-Badge,R. and Camerino,G.
  TITLE     Mouse Dax1 expression is consistent with a role in sex
            determination as well as in adrenal and hypothalamus function
  JOURNAL   Nat Genet 12 (4), 404-409 (1996)
   PUBMED   8630494
REFERENCE   9  (bases 1 to 1674)
  AUTHORS   Dresser,D.W., Hacker,A., Lovell-Badge,R. and Guerrier,D.
  TITLE     The genes for a spliceosome protein (SAP62) and the anti-Mullerian
            hormone (AMH) are contiguous
  JOURNAL   Hum Mol Genet 4 (9), 1613-1618 (1995)
   PUBMED   8541848
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CX212776.1, BC052697.1 and CX214888.1.
            
            On Oct 27, 2007 this sequence version replaced NM_013651.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC052697.1, BU516954.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                CX212776.1         1-31
            32-568              BC052697.1         1-537
            569-859             CX214888.1         75-365
            860-1674            BC052697.1         829-1643
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 39.72 cM"
     gene            1..1674
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /note="splicing factor 3a, subunit 2"
                     /db_xref="GeneID:20222"
                     /db_xref="MGI:MGI:104912"
     exon            1..71
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /inference="alignment:Splign:2.1.0"
     exon            72..234
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /inference="alignment:Splign:2.1.0"
     exon            235..306
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /inference="alignment:Splign:2.1.0"
     exon            307..353
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /inference="alignment:Splign:2.1.0"
     exon            354..463
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /inference="alignment:Splign:2.1.0"
     exon            464..513
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /inference="alignment:Splign:2.1.0"
     exon            514..654
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /inference="alignment:Splign:2.1.0"
     exon            655..723
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /inference="alignment:Splign:2.1.0"
     exon            724..1674
                     /gene="Sf3a2"
                     /gene_synonym="66kDa; PRP11; Sap62; SFA66"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgaggcctt agcgttggtg aggagctgca cagtttgtcg gtggcggctg ctccgtcggg
       61 gaggcttgaa ggtttcttcc tgtcccctga agcacccagg cctgcatcat ggactttcag
      121 cacagacctg gaggcaagac tgggagtggg ggcgtagcct cctcctctga gagcaaccgg
      181 gatcggagag agcgtctgcg ccaattggcc ctggaaacca ttgacatcaa caaggacccg
      241 tattttatga agaaccactt gggatcctat gagtgcaaac tctgcctgac tctgcataac
      301 aatgagggga gctacctggc ccatacccaa gggaagaaac atcagactaa cttggcccgg
      361 cgagctgcca aggaggccaa agaagccccc gcccagcctg caccggagaa ggtcaaggtg
      421 gaggtgaaga agtttgtgaa gattggccgc cctgggtaca aagtgaccaa gcagagggac
      481 acagagatgg gccagcagag cctgctgttc cagattgact accctgagat cgcagagggt
      541 atcatgccac gccaccgttt catgtctgct tatgagcaga ggatcgagcc tccagaccgc
      601 cgctggcagt acctgctcat ggctgctgag ccctatgaga ccattgcttt caaggtgcca
      661 agccgggaga ttgacaaggc tgagggcaag ttttggaccc actggaacag agaaaccaag
      721 cagttttttc ttcagttcca ctttaagatg gagaagcccc cagcacctcc cagcctccca
      781 gcaggacccc caggcgtcaa gcggcccccg cccccactca tgaatggact gcctcctcgc
      841 ccaccactcc ctgatgcctt gcccccacct ccacctggtg gcctgcctct ccctcctatg
      901 ccccccactg ggcctgctcc ctctgggccc cctggacctc cccagatgcc cccaccagct
      961 cctggggtgc accccccggc cccagtagta cacccaccaa catctggagt ccatccccca
     1021 gctcctgggg tacacccccc agcaccagtg gtccatccac caacatctgg ggtccatccc
     1081 ccagcccctg gagtgcaccc acccacccct ggagtgcacc caccagcccc aggagtgcac
     1141 ccaccagctc caggtgtcca cccaccagct ccaggggtac accccccaac tccaggggtg
     1201 cacccaccag ctccaggggt gcacccacca gctccagggg tgcacccacc agctccaggg
     1261 gtacaccctc ctccatcagc tggagttcat cctcaggctc caggggtaca cccacctgct
     1321 cctgcagtac accctcaagc ccctggggta caccccccag cccctgggat ccaccctcag
     1381 gcaccagggg ttcaccctca gccgcctcct ggagtccacc ctgctgcccc gggggtccac
     1441 cctcagcctc caggggttca cccctcaaat cctggggtgc accctgctcc tatgcccccc
     1501 atgctgaggc ccccactccc ctcagatggc cctgggaaca tgcctccccc tcccccaggc
     1561 aactgagcag tccccccacc agcctctgtt gtctgtgtgg tcttttccca ttgccagtcc
     1621 ttggaaggtt ttctatttgt cctgccttga gcctattaaa cagcctcccc cgtg
//
