LOCUS       XM_006532639            4366 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus seizure related gene 6 (Sez6), transcript
            variant X3, mRNA.
ACCESSION   XM_006532639
VERSION     XM_006532639.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006532639.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4366
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..4366
                     /gene="Sez6"
                     /gene_synonym="BSRP-C; D11Bhm177e; sez-6"
                     /note="seizure related gene 6; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 25 ESTs, 945 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 12 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:20370"
                     /db_xref="MGI:MGI:104745"
     CDS             865..3363
                     /gene="Sez6"
                     /gene_synonym="BSRP-C; D11Bhm177e; sez-6"
                     /codon_start=1
                     /product="seizure protein 6 isoform X3"
                     /protein_id="XP_006532702.1"
                     /db_xref="GeneID:20370"
                     /db_xref="MGI:MGI:104745"
                     /translation="MAVPTLLPEDRPSTTPPSQAWTPTQEGPGDMDRPWVPEVMSKTT
                     GLGVEGTIATSTASGDDEETTTTIITTTVTTVQPPGPCSWNFSGPEGSLDSPTAPSSP
                     SDVGLDCFYYISVYPGYGVEIKVENISLQEGETITVEGLGGPDPLPLANQSFLLRGQV
                     IRSPTHQAALRFQSLPLPAGPGTFHFRYQAYLLSCHFPRRPAYGDVTVTSLHPGGSAH
                     FHCATGYQLKGARFLTCLNATQPFWDSQEPVCIAACGGVIRNATTGRIVSPGFPGNYS
                     NNLTCHWLLEAPESQRLHLHFEKVSLAEDDDRLIIRNGNNVEAPPVYDSYEVEYLPIE
                     GLLSSGRHFFVEFSTDSSGAAAGMALRYEAFQQGHCYEPFVKYGNFSSSAPSYPVGTT
                     VEFSCDPGYTLEQGSIIIECVDLHDPQWNETEPACRAVCSGEITDSAGVVLSPNWPEP
                     YGRGQDCIWGVHVEEDKRIMLDIRVLRIGSGDVLTFYDGDDLTARVLGQYSGPRGHFK
                     LFTSMADVTIQFQSDPGTSALGYQQGFVIHFFEVPRNDTCPELPEIPNGWKNPSQPEL
                     VHGTVVTYQCYPGYQVVGSSILMCQWDLSWSEDLPSCQRVTSCHDPGDVEHSRRLISS
                     PKFPVGATVQYVCDQGFVLTGSAILTCHDRQAGSPKWSDRAPKCLLEQFKPCHGLSAP
                     ENGARSPEKRLHPAGATIHFSCAPGYVLKGQASIKCVPGHPSHWSDPPPICRAASLDG
                     FYNGRSLDVAKAPAASSALDAAHLAAAIFLPLVAMVLLVGGVYLYFSRFQGKSPLQLP
                     RTHPRPYNRITVESAFDNPTYETGSLSFAGDERI"
ORIGIN      
        1 cccgcgcggc gatcccgggc gccgacgcca ggcgctggcc gtggtgctga ttctgtcagg
       61 cgctggcggc ggcggcggcg gccccgctgc tctccccggg accggctctg ccccccgcgc
      121 ccacgcctct cccagtcccc agttccccta ccgcggcccc gacccggggc gcggccgcaa
      181 gcagcaccat gcgcccagca gccctgctgc tcctgccctc gctgctggcg ctcctggctc
      241 acgttcgtat ctggctgaga aggaagcctt gtgtgaactt gagaaggaag ccttgtgtga
      301 acttgagaag gaagccttgt gtgaacttga gaaggaagcc ttgtgtgaac ttgaggactg
      361 agactgcaga gtgcactcaa ccattcaggc ttcagaaacc accacacagc ctggagggac
      421 taatgcggag ctctgagatc aggactctcc tcagaggctc cgatcacggg ggaaggtcat
      481 gccacgggca tcagggagac ggatggggag ctgaccgcag cccctacacc tgagcagtca
      541 gaccgaggcg tccacttcgt caccacagcc cctaccctca agctgctcaa ccaccaccca
      601 cttctggaag aatttcttca agaggggcta gaaagagagg aagcgccgca gcctgcactg
      661 cccttccagc cggactcacc tacacacttt actccaagcc ccctcccccg cctcaccaac
      721 caggacaacc gccccgtctt taccagtccg actccagccg tggctgcagc acccacccag
      781 ccccactcca gggagaaacc ttggaaccta gaatccaaac cccctgagct ttctatcaca
      841 tcgtcccttc ctccagggcc gagtatggca gtgcccacac tgctcccaga ggacagaccc
      901 agtactacac cccctagcca agcatggact ccaactcagg agggtcctgg agacatggac
      961 agaccttggg ttccagaggt catgtctaag accacagggc ttggtgtcga gggaaccatt
     1021 gccacctcca cagcttcagg ggatgacgaa gagaccacta ccaccatcat taccactact
     1081 gtcaccacag ttcagccacc aggcccctgt agctggaatt tctcaggccc agagggctct
     1141 ctggattccc ccacggcccc cagctcaccc tctgatgttg gcctggactg tttctactat
     1201 atctctgtct accctggata tggagtagag atcaaggtgg agaacatcag ccttcaggaa
     1261 ggggagacca tcaccgtgga gggcctgggg ggccccgatc cactgccctt ggctaaccag
     1321 tcgttcctgc tgaggggcca ggtcatccgc agccccaccc accaagcagc cctgaggttc
     1381 cagagcctcc cgctacccgc tgggcctggc actttccatt tccgctacca agcctatctc
     1441 ctgagctgcc actttccccg acgtccagcg tatggagatg tgactgtcac cagtctccac
     1501 ccaggaggca gcgcccactt ccattgtgcc actggctacc agctcaaggg tgccaggttc
     1561 ctcacctgtc tcaatgccac ccagcccttt tgggattccc aagagcctgt ttgcattgct
     1621 gcttgtggtg gagtgattcg gaatgccacc actggccgca ttgtctctcc tggcttcccg
     1681 gggaactaca gcaacaacct cacctgccac tggttgctag aggctccaga gagccagcgg
     1741 ctgcacctgc actttgaaaa ggtctccctg gcagaagacg acgacaggct catcatccgc
     1801 aatggaaata acgtggaggc cccgccggtg tacgactcct atgaggtgga atacctgccc
     1861 attgagggcc tgctcagctc tggcagacac ttcttcgtgg agttcagtac tgacagcagt
     1921 ggggcagctg caggcatggc cctgcgctat gaggccttcc agcaaggaca ttgctatgag
     1981 ccctttgtca aatacggcaa cttcagcagc agtgcaccgt cctaccctgt gggtacaact
     2041 gtggagttca gctgtgaccc tggctacacc ctggagcagg gctccatcat catcgaatgc
     2101 gtcgacctcc acgaccccca gtggaatgag acagagccag cctgccgagc cgtgtgcagc
     2161 ggggagatca cagactctgc aggcgtggtg ctctctccaa actggccgga gccttatggc
     2221 cgagggcagg actgcatctg gggtgtgcat gtggaggagg acaagcgcat catgctggac
     2281 atccgagtgc tgcgcatagg ctctggggat gtactgacct tctacgatgg ggatgacctc
     2341 acagcccggg tcctgggcca atactcaggg ccccgtggcc acttcaagct ctttacctcc
     2401 atggccgatg tcaccatcca gttccagtca gaccctggga cctcggcgct gggttaccag
     2461 caaggatttg tcatccactt ctttgaggtt ccccgcaacg acacatgtcc agagctaccc
     2521 gagatcccca acggctggaa gaacccatca cagcctgagc tggtgcacgg cacggtggtc
     2581 acctatcagt gctaccctgg ttaccaggtg gtgggatcca gtattctcat gtgccagtgg
     2641 gacctaagct ggagtgagga cctgccttca tgccagagag tgacatcttg ccatgaccca
     2701 ggggatgtgg agcacagccg acgcctcata tccagcccca agtttcccgt gggagcaact
     2761 gtgcaatatg tctgtgacca gggttttgtg ctgacgggga gtgccattct cacctgccat
     2821 gatcggcaag caggcagtcc caagtggagt gacagggccc ccaagtgtct cttggaacaa
     2881 ttcaagccgt gccatggcct cagcgccccg gagaatggtg cccgcagccc tgagaagcgg
     2941 cttcacccag caggggccac catccacttc tcctgtgccc ctggttatgt gctgaagggc
     3001 caggccagca tcaaatgcgt gcctggacac ccctcgcatt ggagtgaccc accacccatc
     3061 tgtagggctg cctctctgga tgggttctac aacggccgta gcctggatgt tgccaaggca
     3121 cctgccgcct ccagtgccct ggacgctgct cacctggctg ctgccatctt cctaccattg
     3181 gtggccatgg tgttgctggt gggaggagtg tacctctatt tttccagatt ccaggggaaa
     3241 agtcccctgc aacttccccg aactcatcct cgcccctata accgcatcac ggtagagtca
     3301 gcatttgaca atccaactta tgagactgga tctctttcct ttgcaggaga cgagagaata
     3361 tgaagtttcc atctaggtgg gagcagcctg gggatgcaca cgcagtcctg catcgcaggc
     3421 cagcggcagg gctcccggct ctctgctgtc cctcacctcc tgtacatact gcctgggaag
     3481 agacaccacc aaccccttcc ccgcctgcaa tgcccacagt gacctatttt cttggcaccg
     3541 ctgtgcccac ttcgggccct tctttggatt caggggcatc tgcctcgggt agaacgtagc
     3601 tgggacacat taccagcagc catcattctc ctgcttctct tttgccctgg acctccagcc
     3661 tggaagttgc aggctgactg aggaggggca cttgttacac atggccacca tcctgcctgg
     3721 catgtgagga ctccaggaga gctgacttga cagcagggtg cccctcacag ggccagctac
     3781 cagaggccaa aattgttctc aactgtgacc tcttggtagt cctggcgtgc caacaccagc
     3841 ccctcaggga ggtttctagt ccctctctaa aggctcagaa ttggacagtt aagccttctg
     3901 ccctgtcctg ggaggtgatg atttaagaat cctaaaaggt tcagggactc tattccaagc
     3961 tcaggctggg ccccactgga tggatactca cgctccacac caaagcagga caccctacgg
     4021 ctctccggca tccctctact ctgaggaggg agagcccttc cttgaagttt atctggctgt
     4081 tacaaatgtc tccttcccca ccagtccctc ctctgagcca cttaccatgt tcccccttcc
     4141 tgccactgtg ttatggcatg ccaggagagg gcagctacat tctggagagg agcagatgtc
     4201 caaggaccca ggaatgtggc agaagtcaag aacccccagg agcaatctca gtccggaccg
     4261 aggccacttt gtacatatga tgtattatat ggggtctggg ctccagccag agaacaatct
     4321 tttatttctg ttgtttcctt attaaaatgg tgttttggaa aaaaaa
//
