LOCUS       NM_198247               3364 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus SERTA domain containing 4 (Sertad4), transcript
            variant 1, mRNA.
ACCESSION   NM_198247 XM_110305
VERSION     NM_198247.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Kawaguchi,A., Ikawa,T., Kasukawa,T., Ueda,H.R., Kurimoto,K.,
            Saitou,M. and Matsuzaki,F.
  TITLE     Single-cell gene profiling defines differential progenitor
            subclasses in mammalian neurogenesis
  JOURNAL   Development 135 (18), 3113-3124 (2008)
   PUBMED   18725516
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL365326.14 and BC060251.1.
            
            On Apr 28, 2010 this sequence version replaced NM_198247.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Both variants 1 and 2 encode the same protein.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC060251.1, SRR7652917.296481.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164137
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                AL365326.14        57627-57657
            32-323              BC060251.1         1-292
            324-331             AL365326.14        62249-62256
            332-3364            BC060251.1         301-3333
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 97.55 cM"
     gene            1..3364
                     /gene="Sertad4"
                     /gene_synonym="4833404A09; C130018M11Rik"
                     /note="SERTA domain containing 4"
                     /db_xref="GeneID:214791"
                     /db_xref="MGI:MGI:2443496"
     exon            1..310
                     /gene="Sertad4"
                     /gene_synonym="4833404A09; C130018M11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            311..502
                     /gene="Sertad4"
                     /gene_synonym="4833404A09; C130018M11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             328..1461
                     /gene="Sertad4"
                     /gene_synonym="4833404A09; C130018M11Rik"
                     /codon_start=1
                     /product="SERTA domain-containing protein 4"
                     /protein_id="NP_937890.2"
                     /db_xref="CCDS:CCDS15630.2"
                     /db_xref="GeneID:214791"
                     /db_xref="MGI:MGI:2443496"
                     /translation="MTLVLSMNRFCEPIVSEGAAEIAGYQTLWEADSYGGASPPGPAP
                     VPSQGDRGASSHLAGSHYRGIPNPISTPKVTYFKRKYAEDEDLHPPLSSCSHKTISIF
                     EERAHILYMSLEKLRFIDDPEVYLRRSVLINNLMKRIHGEIVMQNSWCLPACSLGGTP
                     AQEWFLAQDCPYRKRPRVAKEEWEKIHTCCFYQECGGHCLNLPLSVNTSVGSTSAAAV
                     ASAASSSSSPSTSSSSSPSSSSSPSPSPSSSSSSSSSSPLPLPSCSHHVDFDIGSAPI
                     YKSQIPASEIFVTNIRSLGVQEKVKFNNDGKVSHETSRDGDALGQEPVGNDLDFECKG
                     QFYDYFETGYNERNRVSESWKKSLRKKELSPSSKLCCNRGGKM"
     exon            503..618
                     /gene="Sertad4"
                     /gene_synonym="4833404A09; C130018M11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            619..3346
                     /gene="Sertad4"
                     /gene_synonym="4833404A09; C130018M11Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3327..3332
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sertad4"
                     /gene_synonym="4833404A09; C130018M11Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      3346
                     /gene="Sertad4"
                     /gene_synonym="4833404A09; C130018M11Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggcgcggcgc cccgcgatct ggcagagcgg agggaggcgg ggagcgcgct tgtcaggttc
       61 cctctcgccc cgggggcatc cagcagagcc aggctcggaa atccgcgggg aaatggcaaa
      121 caggattgac gggtttctcg cgctcctcgc cagacacatc ggctcatttc cataaccgtc
      181 tgcggcggcg gcggcgggac ctgcggggac ctcggccgcc gcgtacccgg ccacgccgac
      241 tgggcccggg aggcgcgtgg gcagcggcgg ccgcgcggag gacggcggcg gctggagcgc
      301 ggggcgcgcg atctaaggct gttagagatg acgctggttc tgtccatgaa tagattctgc
      361 gagcccattg tctcagaagg agctgctgag attgccgggt accaaacact atgggaggct
      421 gacagctacg gaggtgcgag ccccccaggg ccagctccag ttccttctca gggagaccgg
      481 ggagccagct cacacctggc aggatcacat tacaggggaa ttccaaatcc tataagcaca
      541 cccaaggtca catacttcaa gaggaagtat gcagaagacg aggatcttca cccaccactc
      601 agcagctgca gccataaaac catctccatt ttcgaggagc gagcacacat cctttacatg
      661 tccttggaga agctcaggtt catcgatgac ccagaagtgt acctgcgaag gtctgttctg
      721 atcaacaacc tgatgaagag gatccacggg gagattgtca tgcagaacag ctggtgcctc
      781 cctgcctgct ccctcggtgg cacccccgcc caagagtggt tcctggctca agactgtcct
      841 taccggaaac ggccccgggt ggccaaagag gagtgggaaa agatccacac ttgctgtttt
      901 tatcaggagt gtggtggtca ctgcctgaac ctacccctct ctgtcaatac aagtgttgga
      961 agcacctcgg ccgccgctgt ggcctcggct gcctcttcct cttcctcccc atccacctct
     1021 tcttcatcct ccccatcctc atcctcctct ccctctccct ctccctcttc ctcctcctcc
     1081 tcctcctcct cttcccctct gcctttgcct agttgctccc accatgtgga ctttgacata
     1141 ggcagtgcac ctatttacaa gagccaaata cccgccagcg aaatctttgt cactaacatt
     1201 aggtcgcttg gtgtccagga aaaggtcaaa ttcaacaatg atgggaaagt aagtcacgaa
     1261 accagcagag atggtgatgc cctcggccaa gaacctgtgg ggaacgacct tgattttgag
     1321 tgcaaaggcc aattttacga ttattttgag actggatata atgagagaaa ccgtgtgagt
     1381 gagtcttgga aaaagtcttt gaggaaaaag gagctttctc cgagcagcaa actgtgctgc
     1441 aacagagggg gtaaaatgtg atgcccccca ctggcgcgga agcacgcaca gcatgatcag
     1501 tttttacttt ggattttgta gttttgtaca acagataaaa tcatgcagtg aacaccacgc
     1561 cgggttgtct cattgcctgg agatcagatt gcacaaaaca tctgtacagt aggcatctgc
     1621 aagccactta ttcatgtgat tttttgccaa ggaaagccaa cttcatgttt caaagtatac
     1681 cttagttttc ttttcttttt cttttttctt ttcttttttt tttgtaaaaa aaaatcagta
     1741 gaatagatag aagaaaacat gccctcgtta tattcccact gcccctccaa ggaacctgcg
     1801 ctagccaaat gcaacatgtt tgccagttaa ttaggtagtt acttggtaaa caaatcaata
     1861 taaccagcag aggtgcctgc ttcgatgtga tgcagtattt ttctttcctg agtaaaagac
     1921 tggagacagg aagctagatg aagtggtttc atgagctgtg tcatgtttgt actggacagg
     1981 ttggggcaaa atgaagcgca cctggcaaga cagcaatcta ggatctgtgg agacagttcc
     2041 ccacaagctc cttgcttgcc tgtgatgggt agtgggtggc tagagaggtg gcatacagag
     2101 ccacctctga tggggtgatg atagagaggt ggcacataca gagccatctt tgatggggtg
     2161 gctagagagg tggtgtacag agccatctct gatagggtca tagggaggtg gcatgcaaag
     2221 ccatctttga tggggtggct agagaggtgg cgttcagggc catcttagtg atggggtgat
     2281 aggtggcata cagggccatc ttgggtgcct tactttatct taatttttgc cagtgtgaaa
     2341 attaaggatg aatcagagtt acagcaggga tttgacaaaa cacagggtgg atccatgcag
     2401 tttggaaact taactttgaa cgatcgcgtt caactttcga gttaccctcc ccctttttcc
     2461 tttgtttgtg acgcccagtg gctgtgggtc tgatattttt gggtagagat ggagaagaca
     2521 atggggaagg ccatcaggca cagagaaggc tgccttggtt ctccatggca acgagcagtt
     2581 gcttggtctg ggctctccca gctttgggct gttttgtttc cttatccagt gacattcaca
     2641 gcccgtggca tgcgttatat tttgacctgt ttttgcatca tttcatgcgt ttagactctt
     2701 aagagcatgt ggtttctata tatgactttt gctgttgatt gagaagcaca atgttaatag
     2761 agtacgtggt gatcaatatg ttttatctta aagaatgtaa aggtttgtag gttgcggaac
     2821 gttattttgg agaaatgggg ctcgcttgtc atagatattg tgtatttggc caacacacta
     2881 ctcaacaata ccttggattt gcacattggc aagtgtactc agtgggactc ggaacgcccc
     2941 caccagctcc taatgagcta ctccaatctc caaggccaag gattggtctg ggtgacttgg
     3001 gtctcttaaa acaattattt acaggaacca aatgccaaaa ggaagaaata ggtaagttct
     3061 cccactttct ccaagatgaa gctttttaat tattgctatt aatattaaat aggtctcatt
     3121 catacagtgt atgagtagat catttgggca attgtccaca aggaccaatt tttaaaagat
     3181 gttcctgtgt tatggctgaa tagtctagta atgtctcgtc ctttattttc aatatttgat
     3241 gaacattttg gtgttgaaaa cttagctgat agatgcttgt acatgacttg tgttgtaata
     3301 tagtgaggtt ttcttgatat atatttatta aaatgatcaa aattcaaaaa aaaaaaaaaa
     3361 aaaa
//
