LOCUS       NM_001382852            1346 bp    mRNA    linear   ROD 14-AUG-2022
DEFINITION  Mus musculus serine (or cysteine) peptidase inhibitor, clade B,
            member 6c (Serpinb6c), transcript variant 2, mRNA.
ACCESSION   NM_001382852 XM_006516817
VERSION     NM_001382852.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Heit C, Jackson BC, McAndrews M, Wright MW, Thompson DC, Silverman
            GA, Nebert DW and Vasiliou V.
  TITLE     Update of the human and mouse SERPIN gene superfamily
  JOURNAL   Hum Genomics 7, 22 (2013)
   PUBMED   24172014
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1346)
  AUTHORS   Joshi S, Davies H, Sims LP, Levy SE and Dean J.
  TITLE     Ovarian gene expression in the absence of FIGLA, an oocyte-specific
            transcription factor
  JOURNAL   BMC Dev Biol 7, 67 (2007)
   PUBMED   17567914
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1346)
  AUTHORS   Charron Y, Madani R, Nef S, Combepine C, Govin J, Khochbin S and
            Vassalli JD.
  TITLE     Expression of serpinb6 serpins in germ and somatic cells of mouse
            gonads
  JOURNAL   Mol Reprod Dev 73 (1), 9-19 (2006)
   PUBMED   16175637
REFERENCE   4  (bases 1 to 1346)
  AUTHORS   Kaiserman D, Knaggs S, Scarff KL, Gillard A, Mirza G, Cadman M,
            McKeone R, Denny P, Cooley J, Benarafa C, Remold-O'Donnell E,
            Ragoussis J and Bird PI.
  TITLE     Comparison of human chromosome 6p25 with mouse chromosome 13
            reveals a greatly expanded ov-serpin gene repertoire in the mouse
  JOURNAL   Genomics 79 (3), 349-362 (2002)
   PUBMED   11863365
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL450406.17.
            
            On May 27, 2020 this sequence version replaced XM_006516817.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189676.3506.1,
                                           ERR3363660.2668091.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164133, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-84                AL450406.17        178216-178299       c
            85-259              AL450406.17        172370-172544       c
            260-412             AL450406.17        170452-170604       c
            413-530             AL450406.17        168377-168494       c
            531-673             AL450406.17        166912-167054       c
            674-829             AL450406.17        153730-153885       c
            830-1346            AL450406.17        152924-153440       c
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 13.99 cM"
     gene            1..1346
                     /gene="Serpinb6c"
                     /gene_synonym="ovalbumin; SPI3C; SPIC"
                     /note="serine (or cysteine) peptidase inhibitor, clade B,
                     member 6c"
                     /db_xref="GeneID:97848"
                     /db_xref="MGI:MGI:2145481"
     exon            1..84
                     /gene="Serpinb6c"
                     /gene_synonym="ovalbumin; SPI3C; SPIC"
                     /inference="alignment:Splign:2.1.0"
     exon            85..259
                     /gene="Serpinb6c"
                     /gene_synonym="ovalbumin; SPI3C; SPIC"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..1231
                     /gene="Serpinb6c"
                     /gene_synonym="ovalbumin; SPI3C; SPIC"
                     /note="serine (or cysteine) proteinase inhibitor, clade B,
                     member 6c"
                     /codon_start=1
                     /product="serine proteinase inhibitor member 6C"
                     /protein_id="NP_001369781.1"
                     /db_xref="GeneID:97848"
                     /db_xref="MGI:MGI:2145481"
                     /translation="MMDPLLEANATFALNLLKILGEDRSKNVFLSPISISSALVMVLL
                     GAKGTTAIQITQALSLGKCSSSEDGDVHQGFQLLLSEVNKTGTQYSLKAANRLFGEKT
                     FDILASFKDSCHKFYEAEMEELDFKGATEQSRQHINTWVAKKTEDKIKELLSPGTIHS
                     NTPLILVNAVYFKGKWEKQFNKEDTREMPFKVSKNEEKPVQMMFQKSTFKMTYVEEIS
                     TKILLLPYVGNELNMIIMLPDEHVELSTVEKEITHEKFIEWTRLDRMKGEKVEVFLPW
                     FKLEENYDMKDVLCKLGMTDAFEEGRADFSGISSKQGLFLSNVIHKSVVEVNEEGSEA
                     TAATTIVLKGSSRSTPCFCVNRPFIFFIQHIKTNEILFLGRLSSP"
     exon            260..412
                     /gene="Serpinb6c"
                     /gene_synonym="ovalbumin; SPI3C; SPIC"
                     /inference="alignment:Splign:2.1.0"
     exon            413..530
                     /gene="Serpinb6c"
                     /gene_synonym="ovalbumin; SPI3C; SPIC"
                     /inference="alignment:Splign:2.1.0"
     exon            531..673
                     /gene="Serpinb6c"
                     /gene_synonym="ovalbumin; SPI3C; SPIC"
                     /inference="alignment:Splign:2.1.0"
     exon            674..829
                     /gene="Serpinb6c"
                     /gene_synonym="ovalbumin; SPI3C; SPIC"
                     /inference="alignment:Splign:2.1.0"
     exon            830..1346
                     /gene="Serpinb6c"
                     /gene_synonym="ovalbumin; SPI3C; SPIC"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcttttatag acgttatggt ctttgtgaag ttaggctcaa acgacaagtc tttggaggcc
       61 ctcagtgtaa gaagaaggat actggctcac catgatggat cctctgctgg aagcaaatgc
      121 tacttttgcc ttaaaccttt taaaaatatt gggtgaagac agatccaaaa atgtattttt
      181 atcacccata agcatctctt cagcgctggt catggtctta ttgggggcaa aaggaaccac
      241 tgcgatccag ataactcagg cactgtcttt gggtaaatgc agcagcagtg aagatggaga
      301 cgtccaccag ggcttccagt tacttctcag cgaagtgaac aagactggca cacagtactc
      361 gctcaaagca gccaacaggc tcttcgggga aaagactttt gatatcctag catcttttaa
      421 agattcctgc cacaagttct atgaagcaga gatggaagag ctggacttta agggtgctac
      481 agagcagtcc cgacagcaca tcaacacctg ggtagccaaa aagacagaag ataaaatcaa
      541 agagttgcta tctccaggta caatacattc aaacactcca ctgatcctcg tgaatgctgt
      601 ctacttcaaa ggaaagtggg agaagcagtt taacaaagag gacaccaggg agatgccatt
      661 caaagtcagc aagaatgagg agaaacctgt gcaaatgatg tttcagaagt ctacctttaa
      721 gatgacctat gtggaagaga tatccaccaa gattttgttg cttccctatg ttggcaatga
      781 gctgaacatg atcatcatgc ttccagatga acacgttgaa ctgagtacgg tggaaaagga
      841 aataactcat gagaaattta tagagtggac gaggctggac aggatgaaag gagaaaaggt
      901 ggaggttttc ctcccatggt ttaagctgga ggagaactat gacatgaagg atgtcctctg
      961 caagctgggc atgactgatg cctttgagga gggcagagca gacttttctg gaatatcttc
     1021 caagcaaggc ttgtttctgt ccaatgtcat acataaatct gttgtggagg tgaatgagga
     1081 aggctcagag gctacagctg ccactacaat tgttctgaag gggtcatcac ggtccacccc
     1141 ttgtttctgt gttaaccgcc ccttcatttt cttcattcag cacattaaga ccaatgagat
     1201 tctgttcctt ggccggctct cctctccctg aggaaaggtt gttcttgtca gtatttcatc
     1261 ctttctctgt ggtttgcctg aaacccaagt gaccttatcc ataagtgcaa tgacagctat
     1321 gaaataaagg gcttaatggc acccca
//
