LOCUS       NM_001310472            1532 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus serine (or cysteine) peptidase inhibitor, clade A
            (alpha-1 antiproteinase, antitrypsin), member 16 (Serpina16), mRNA.
ACCESSION   NM_001310472 XM_006516442 XM_006543014
VERSION     NM_001310472.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC098741.2 and AC125360.4.
            
            On or before Jul 14, 2015 this sequence version replaced
            XM_006516442.1, XM_006543014.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on RNA-seq alignments and orthologous data.
            
            CCDS Note: This gene lacks full-length transcript support.
            Therefore this CCDS representation has an inferred exon combination
            based on RNA-seq and orthologous transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.214557.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-64                AC098741.2         183133-183196
            65-185              AC098741.2         183870-183990
            186-808             AC098741.2         184430-185052
            809-1079            AC098741.2         187191-187461
            1080-1230           AC098741.2         189474-189624
            1231-1532           AC125360.4         168960-169261       c
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 52.98 cM"
     gene            1..1532
                     /gene="Serpina16"
                     /gene_synonym="Gm46"
                     /note="serine (or cysteine) peptidase inhibitor, clade A
                     (alpha-1 antiproteinase, antitrypsin), member 16"
                     /db_xref="GeneID:194604"
                     /db_xref="MGI:MGI:2684892"
     exon            1..64
                     /gene="Serpina16"
                     /gene_synonym="Gm46"
                     /inference="alignment:Splign:2.1.0"
     exon            65..185
                     /gene="Serpina16"
                     /gene_synonym="Gm46"
                     /inference="alignment:Splign:2.1.0"
     exon            186..808
                     /gene="Serpina16"
                     /gene_synonym="Gm46"
                     /inference="alignment:Splign:2.1.0"
     CDS             187..1443
                     /gene="Serpina16"
                     /gene_synonym="Gm46"
                     /codon_start=1
                     /product="serine (or cysteine) peptidase inhibitor, clade
                     A (alpha-1 antiproteinase, antitrypsin), member 16
                     precursor"
                     /protein_id="NP_001297401.1"
                     /db_xref="CCDS:CCDS79151.1"
                     /db_xref="GeneID:194604"
                     /db_xref="MGI:MGI:2684892"
                     /translation="MAVSILSLWLLLAVLVPCFGGPVTPPTETSNTSRTPAIQGAPPF
                     FNNQKFALSLYTQLPKSKLGKNVIFSPLSITMPLVLLAFQDKPEARRQVLQGLGFGVT
                     GALDAKAAVQYGKLLSALLPAEHCGIHTGSLFFIDKTLKPQTTFLTLANSSYSSDVIL
                     ISFGNHKLAKKQIDLAIKVKTQGKVTRLLRNLKPPTHLFLTNYNLFKGKWKYRFNPKY
                     TGMRNFSLSNGTNILVPMMQKIGWFQLKYFSHIHSYVLQLPFTCNISGVFFLPNDGDL
                     KECEKALLEQSFNTWIQPFPLRKRWLFFPKFSIPVALQLESFKHVNSSLKLFNKRMDL
                     SGITLQKAPLRVTMAVHRAELAVSEDGEGEDVSNSRVNPEPGLAALHFNRSFLLLILD
                     EASKSLLFMGRVLNPTRVITDAVHRP"
     exon            809..1079
                     /gene="Serpina16"
                     /gene_synonym="Gm46"
                     /inference="alignment:Splign:2.1.0"
     exon            1080..1230
                     /gene="Serpina16"
                     /gene_synonym="Gm46"
                     /inference="alignment:Splign:2.1.0"
     exon            1231..1532
                     /gene="Serpina16"
                     /gene_synonym="Gm46"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgactgcttg gactggcaag ttgtgttttc ggctccctca ttcttctgtc ctgggcagct
       61 acagggcaag ccagtggata cagaagaggt tgatccgggt cccaaggcct cagactccaa
      121 gggacaagca ggacacagaa gggcaaaggc cggcacctgg gcagccactg gcagacaggt
      181 ttcaggatgg cagtctccat cctgtccctc tggttgctcc tggctgtgct agttccctgt
      241 ttcggtggcc cagtgacacc gcccacagag acttcaaaca cgtcacgaac accagcaatc
      301 caaggggcac ccccattctt caacaaccaa aaatttgcct tgagcctgta cacacagcta
      361 ccaaagtcca aactaggcaa gaacgtcatc ttctctccac tcagtatcac catgcctctc
      421 gtgctgctgg ccttccagga taagccggaa gcccgacggc aagttctgca gggtctaggg
      481 ttcggagtca caggagcctt ggatgctaag gccgccgtgc agtatgggaa gctgctgagt
      541 gctctgctgc ctgctgagca ctgtgggatc cacactggaa gtttgttctt tatagacaag
      601 accctaaagc cacaaacgac gtttctcaca ctagccaaca gctcctacag cagcgacgtc
      661 atcctcatct cttttgggaa ccataagttg gccaaaaagc agatagactt ggccattaag
      721 gtcaagactc aaggcaaagt tacaaggctg ctgagaaatt tgaagccacc aactcatttg
      781 tttctgacca attataatct ctttaaagga aaatggaaat atcgctttaa cccgaagtac
      841 acagggatga ggaacttctc cttaagcaat gggaccaata tcctggtacc aatgatgcag
      901 aagataggct ggttccagct gaagtatttc tcccacatac acagctatgt cctccagctg
      961 ccattcacct gcaacatctc gggtgtcttc tttcttccca atgatggaga tcttaaggaa
     1021 tgtgagaagg cactgttgga gcagagtttt aacacgtgga ttcagccctt tccactgaga
     1081 aagcggtggc tgtttttccc caaattctcc atacccgttg ctcttcagct ggaaagtttc
     1141 aagcatgtta acagtagcct taaactgttc aacaaacgca tggacctctc aggaatcact
     1201 ctgcaaaagg cacccttgag ggtcaccatg gcagtgcaca gggcggagct ggctgtgagt
     1261 gaggatggag agggagagga tgtctccaac agccgtgtca accccgagcc aggccttgct
     1321 gccctccact tcaatagatc cttcctacta ctaatcctgg atgaggccag caagagcctt
     1381 ctcttcatgg ggagagtgct gaatcccact agagtcatca cggatgctgt acatcgtccc
     1441 tgaattctaa ttcccccccc ctcactacct gagttgtagc agagttatat tcctttgagg
     1501 ttcggttcaa taaaacaaac agcaagtgag aa
//
