LOCUS       XM_006518813            6203 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus SEC24 homolog C, COPII coat complex
            component (Sec24c), transcript variant X1, mRNA.
ACCESSION   XM_006518813
VERSION     XM_006518813.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000080.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006518813.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6203
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="14"
     gene            1..6203
                     /gene="Sec24c"
                     /gene_synonym="2610204K03Rik; mKIAA0079"
                     /note="SEC24 homolog C, COPII coat complex component;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 mRNAs, 130 ESTs, 1609 long SRA reads, and
                     90% coverage of the annotated genomic feature by RNAseq
                     alignments, including 41 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:218811"
                     /db_xref="MGI:MGI:1919746"
     CDS             1777..5142
                     /gene="Sec24c"
                     /gene_synonym="2610204K03Rik; mKIAA0079"
                     /codon_start=1
                     /product="protein transport protein Sec24C isoform X1"
                     /protein_id="XP_006518876.1"
                     /db_xref="GeneID:218811"
                     /db_xref="MGI:MGI:1919746"
                     /translation="MNVNQSAPPVPPYGQNQPIYPGYHQSSYGGQPGPAAPATPYGAY
                     NGPVPGYQQAPPQGVPRAPPSSGAPPASAAQVPCGQTTYGQFGQGDIQNGPSSTAQMQ
                     RVPGSQQFGPPLAPVVSQPAVLQPYGPPPTSTQVTAQLAGMQISGAVAQAPPPSGLGY
                     GPPTSLASASGNFPNSGPYGSYPQSQAPPLSQAQGHPGVQPPLRSAPPLASSFTSPAS
                     GGPQMPSMTGLLPPGQGFGSLPVNQANHVSSPPAPALPPGTQMTGPPVPPPPPMHSPQ
                     QPGYQLQQNGSFGPARGPQPNYESPYPGAPTFGSQPGPPQPLPPKRLDPDAIPSPQLN
                     ELPPQQKTRHRIDPDAIPSPIQVIEDDRNNRGSEPFVTGVRGQVPPLVTTNFLVKDQG
                     NASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGESGPLRC
                     NRCKAYMCPLMTFIEGGRRFQCSFCSCVNDVPPQYFQHLDHTGKRVDAYDRPELSLGS
                     YEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDYLPREGGAE
                     ESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVSESRAVIT
                     SLLDQIPEMFADTRETETVFAPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKN
                     RDDRKLINTDKEKTLFQPQTGTYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQL
                     TGGSVYKYACFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMS
                     NTTDVELAGLDGDKTVTVEFKHDDRLNEENGALLQCALLYTSCAGQRRLRIHNLALNC
                     CTQLADLYRNCETDTLINYMAKFAYRAVLNSPVKTVRDTLITQCAQILACYRKNCASP
                     SSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVSSMDVAETNVFF
                     YPRLLPLVRTKSPLDSTAEPPAVRASEERLSSGDIYLLENGLNLFVWVGASVQQGVVQ
                     SLFNVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRMRYMKLIVVKQEDKLEML
                     FKHFLVEDKSLSGGASYVDFLCHMHKEIRQLLS"
ORIGIN      
        1 agcatatgct tttaatcgca gctcgctggg ggcagaagca gaaggatctc tgtgaattgg
       61 agaccggctg gatccacaca atgaattcag gagggttata cagtgagacc tcctatgaga
      121 gagagagaga gagagagaga gagagagaga gagtcataag agtggataaa agtggtggtg
      181 gtaatgtacc ctttaatccc agcacttgcg aggcagaggc aggtgaattt ctgagttcaa
      241 gatcaacctg gtctacagag tgagttccag gacagccagg gctacacaga gaaaacctgt
      301 ctctgaaaaa aaaaaaaaaa tcccaaataa ataggaaaga tattaattta catttctaac
      361 aagtctcagc tgatactgat actaggatcc acggacagta ttttaaaagt ggatagaaac
      421 agggctggtg acaaagaaca ctggctgctt ttccaggtga cttgggtttg atttccagca
      481 tccatgtatc ttacaagatt tgttaactcc agttccaggg gatccagtgc cctcttctgg
      541 cctctgcagg tactgtagtc acaaagtgca cagatacaca ttcaggcaaa acacccatac
      601 ataagacatt ttaaaacaag ctagacagaa acaactgact ggttagtaac tgacatgcaa
      661 acttaaatgc ccatttttct ctaagcatgc attactgtgt aactaccatt acgtaggaaa
      721 aaaccccaca aaacagtttg cctactctat tcatgaacct aagttggccc aaagaagtgc
      781 ttaaagcata acagcacaga aagaattcca atgcatgcaa cggagaggtt ggaagcataa
      841 aaagtgggag ttcacggtga tcatgggtta tatatccagt ttcaggatag tctgcctata
      901 aattgagatc cagtctcaaa aaactgatta gaggataaaa gagcaataat catttattag
      961 ttaacattgt tctctgaaga gtcttatgat tactgaaaga attgtagctc ttttaacaga
     1021 gagcagggag gtctttatat tctggtagag ttacctctat taaaaaaagg gcaaggcata
     1081 aaatggtaac taatctttat tgaataaaca ttatactgaa caatcttagg aaacgtctct
     1141 aaattcatcc caattcactg ttcgacacga attcttttca ttaaagaagt aaaccggggc
     1201 agaagttgtc caaacattga actaatcggc ccaaagtcga gggttagaac ccaccctacc
     1261 actaccacgt gtggctcaaa ggtcagggtg agctctaccg tagggacgca aatcaacggg
     1321 gtgaaaggtt aacaggaagt ggatacaaga ctagctgtcc ttaaagtcaa cacacgacga
     1381 agggagcgtt actaaaaata atctgaccta gttttctcaa taccctctca gctggtaaag
     1441 ccataaaaaa agtctggaaa atgtggaaaa atctggaaag gaaagaaaaa aaaaaaaaaa
     1501 aaaaaaagca tgaaactcag caatacttta cagactgcgt ccatgacggg atacaccaca
     1561 tacgcatgcg caacatccgg gtttccggaa gcgtgcctaa ggccgacgtg gcagaaggag
     1621 tggcctagcc ctagagcatg gggcggaact tccggggacg gcacgccagc cccccccccc
     1681 tcggaaccgg aagttgagcc tgggagcctt gacgttagga acgaagtcga acctggatct
     1741 ggagccgggt gagatcaaat cggggatgct ctcataatga atgtcaacca gtcagctcca
     1801 cctgttccac catatgggca gaaccagccc atctacccag ggtatcatca gtcgagttat
     1861 ggtgggcaac caggacctgc agcccctgct actccctatg gagcctacaa tggcccagtg
     1921 ccaggttatc agcaggcacc tcctcaaggt gtgccaagag ccccaccttc ctcaggggca
     1981 cctccagcct ctgcagcaca ggtcccttgt ggtcagacta catatggcca gtttggccaa
     2041 ggtgatatac agaatgggcc gagttccaca gctcagatgc aaagggtccc tggttctcag
     2101 cagtttggtc ctccattggc ccctgtggtc agccagccag ctgtgcttca gccctatggc
     2161 cctcccccca caagtacaca ggtgactgca cagctggccg gaatgcagat cagtggtgct
     2221 gtggcccagg cccctccccc ttctgggttg ggctatggtc caccaacatc attggcctca
     2281 gcctcaggaa atttccctaa ttctggtcca tacggctcct atcctcagag ccaggctcct
     2341 ccccttagcc aggctcaagg tcatcctgga gtccagcctc cccttcgatc tgccccacct
     2401 ctggcttcca gcttcacgtc cccagcttca ggtggtcctc agatgccttc catgactgga
     2461 ctactcccgc ctggacaggg ctttgggagt cttccagtga accaggctaa ccacgtgtcc
     2521 tcacctcctg ctcctgctct gcccccgggc acccagatga ctgggccccc agtaccaccg
     2581 ccaccaccta tgcactcccc tcagcagcct ggttatcagc tgcagcaaaa tggttccttt
     2641 ggaccagctc gaggccctca acctaattat gagagcccat accctggagc acctaccttt
     2701 ggcagtcagc ctgggcctcc ccagccattg cctcctaagc gtctggaccc tgatgccatc
     2761 cccagccctc aacttaatga gctgcctcct cagcagaaaa ccaggcacag aatagatcct
     2821 gatgccattc ctagtccaat tcaggttatt gaagatgata gaaacaaccg gggttcagag
     2881 ccatttgtta ctggtgtacg gggacaggtg ccacctttag tcaccaccaa tttcctggtg
     2941 aaagaccaag ggaatgcaag tccccgctac attcgatgca catcctataa tatcccttgt
     3001 acttctgaca tggctaaaca ggctcaggtg cctctggccg ctgtcattaa accactggca
     3061 aggctgcctc cagaggaggc ttcaccgtat gttgtggatc atggagaatc tggccccctg
     3121 cgctgtaatc gctgcaaagc atacatgtgc cctctcatga cattcatcga gggagggagg
     3181 cgcttccagt gctccttctg cagttgtgtc aatgatgttc ccccccagta ttttcaacat
     3241 ctggatcata ccggcaaacg tgtggatgct tatgaccgtc ctgagctgtc tctgggatct
     3301 tatgaattct tggctactgt agattactgt aagaacaata aattccctag tcctcctgcc
     3361 ttcatcttta tgattgatgt ctcctacaat gccatcagaa ctggtcttgt tcggctcctc
     3421 tgtgaggagc tcaagtcact cttagactac ctacctaggg agggtggagc agaagagtca
     3481 gcaatccgag ttggctttgt cacctataat aaagtgctcc acttctacaa tgtgaaaagc
     3541 tccttggctc agccacagat gatggttgta tctgatgtag ctgacatgtt tgtgccactg
     3601 ctggatggct tcctagtcaa tgtcagtgag tctcgggctg ttatcaccag cttattggat
     3661 cagattccag aaatgtttgc agatacaaga gagacagaga cagtgtttgc tccagttatc
     3721 caggccggga tggaagctct gaaggctgct gagtgtgcag gaaagctgtt tctgttccac
     3781 acatccttgc ccattgcaga ggccccaggg aagctgaaga atagagatga taggaagttg
     3841 atcaacacag acaaggagaa gactctgttt cagcctcaga caggtaccta tcagactctg
     3901 gccaaagagt gtgtggccca aggctgctgt gtggacctct tcctcttccc taaccaatat
     3961 gtcgatgtgg ccacactctc tgttgttccc cagctcactg gaggctctgt ctacaaatat
     4021 gcctgcttcc aggtggaaaa tgaccaggaa cggttcttga gtgacctgcg tcgggatgta
     4081 cagaaggtgg ttggctttga tgctgttatg cgggttcgga caagtactgg tatccgtgct
     4141 gtagatttct ttggcgcttt ctatatgagc aatacaacag atgtggagtt ggctggattg
     4201 gatggagaca agacagtgac tgtggaattc aagcatgatg accggctcaa tgaagagaat
     4261 ggagccctac tgcagtgtgc cctgctttat accagctgtg cagggcagcg tcggctccgc
     4321 atccacaact tggccctaaa ctgctgcacc cagctggctg atctgtatcg aaactgtgag
     4381 actgacacgc tcatcaacta catggccaag tttgcatacc gggctgttct gaatagtcct
     4441 gtgaagactg tccgtgacac tctcatcacc cagtgtgccc agatcctggc ctgttataga
     4501 aagaactgtg ccagcccttc ttctgcagga cagttgattc ttcctgagtg catgaagctc
     4561 ctcccagttt acctgaactg tgtgttgaag agtgatgttc tgcagcctgg agctgaggtc
     4621 actactgatg atcgtgccta tgttcggcag ctggtttcct ccatggatgt ggctgagacc
     4681 aatgtcttct tctaccctcg gctcctacca ctggtgcgaa caaagtctcc ccttgatagt
     4741 accgctgaac caccagcagt tcgagcctct gaagagcgcc taagcagtgg cgatatatat
     4801 ttgctggaaa atgggctcaa cctctttgtc tgggtgggag caagcgtcca acaaggtgtt
     4861 gtccagagcc ttttcaacgt gtcctccttc agtcagatca ccagcggctt gagtgttctg
     4921 ccagttctgg ataatccact gtctaagaaa gttcgaggtc tcatcgatag cttacgggca
     4981 cagagaatgc ggtacatgaa gcttatcgtg gtcaagcagg aagacaagct ggagatgctg
     5041 ttcaagcact tcctggtgga agacaagagc ctaagtggag gtgcatccta tgtggacttt
     5101 ctctgtcata tgcacaagga gatccggcag ctactgagct aaagcaagtg ggtaaatggc
     5161 atagggtccc aggccagctt ccaggaagaa ccccaggatg acagagaaat tgggacagtt
     5221 ccatatcgta taagtcatgt aagctgacct cagttgactt cttttggggg gagggcgaga
     5281 tataaggaga caccgtcttt ctgggctcaa atacactacc actctgtcat gtcctgctga
     5341 tcgaaggtgc ctcaggcccc ttactctacc ctttctcctg ctaatcctct tgtaatgaat
     5401 gtagtttctc agttcactgt atatgattcg gtgttggggg tttggaggca gctgggccct
     5461 ggcaacagtg tgtccctttg gatgagcctc caagaggaag ggcaggcagg aagaagtggg
     5521 aatcccaggg ttattacagg aggtggcaaa ttcagctccg tgtcatcaac aacttcctat
     5581 attagggaca aaatatacag gtgcacaaga gctggggtac aggccgtagg tggtggagag
     5641 taaaatagtt ggtcctttgg gtgcctgatg gtcagtagca aagtcatagt taccgaggat
     5701 ggatgactaa tctctctact tccactgcgc gtgctctctc tcccctgcaa tgattggtga
     5761 gcacttcgtg gatgaatgag cctggggtaa gaattgcaaa acatattaac accttgggga
     5821 agtagcagcc tcctttccag atggagaagc cccaatcctg gatggttctg tagagcgcct
     5881 gatggtcaac ttgcaatacc tcacagagcc agcccacatc ccactcagct tccaccagaa
     5941 acgttgttgg ggagaggcag atatggctgg agccctgtct tccggtgcca ggacgttact
     6001 gggctttggt attgactgag tggctgacaa gttatcttcc aactccagtt ggctgggcag
     6061 gacaagggct aggaatgacc gtggtcaggc ctgcctgctc ccagcccagg atgcccctgc
     6121 tatggacctt tcatttcttt tcattggttt atttttcaat gcatctttaa tttgtaaaga
     6181 aataaaataa gatgtaacca gta
//
