LOCUS       XM_036163481            4944 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus SEC24 homolog B, COPII coat complex
            component (Sec24b), transcript variant X2, mRNA.
ACCESSION   XM_036163481
VERSION     XM_036163481.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4944
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..4944
                     /gene="Sec24b"
                     /gene_synonym="SEC24"
                     /note="SEC24 homolog B, COPII coat complex component;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 113 ESTs, 872 long SRA reads, 6
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 12 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:99683"
                     /db_xref="MGI:MGI:2139764"
     CDS             178..3816
                     /gene="Sec24b"
                     /gene_synonym="SEC24"
                     /codon_start=1
                     /product="protein transport protein Sec24B isoform X2"
                     /protein_id="XP_036019374.1"
                     /db_xref="GeneID:99683"
                     /db_xref="MGI:MGI:2139764"
                     /translation="MQVPSGYGLPHQNYMVPSGHYSQGPGKMTSLPLDSQCDSYYSRP
                     YTVPTQNSGTPSSANQPGAQQMYGRGPSAPHMGGSMPGSFQGIPASASHSYSSASQPY
                     SSLGNRYSSPTTYSANASVASQGYPSTCSHYPISTVSNVVYPNVSYPSLPASEPYGQM
                     FTSQSAPPPARPVKESYSGPSTALTYPSRPPPPPSQHQQQQQQQQQQQQQQQSHSGYS
                     SLPWSGPALPPAQDSLIRNQMGSLATANSHPTNNENVQPPKSSSVVSTVLPGPSSTRM
                     PPAPSHPVGPVPSAPPPPEQMQTKGMQYGDYGNNQASSTATPLSSASDDEEEQEEDEE
                     AGVDSSSTTSSASPLPNSYDALEGGSYPDMHSSSASSPVPDHALEPSPTLAQALSAAP
                     TPPAAQPAKVAKPFGYGYPALQPAYQNAAPPPMPAAHPSGPAYTGYPQHYPGVNQLSS
                     GLGGLSLQSSPQPESLRPVNLTQEKNILPPTPIWAPVPNLSAELSKLNCSPDSFRCTL
                     TSIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRSCRTYINPFVSFIDQR
                     RWKCNLCYRVNDVPEEFLYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVY
                     LFVLDVSHNAVEAGYLTVLCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEGLSQ
                     PQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPSMFINTRETHSALGPALQA
                     AFKLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVHHLGPATDFYKKLALD
                     CSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIFYYPSFHSTHNPSQAEKLQKDLKR
                     YLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESL
                     TDTALVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVDVQAAVCLLANMAVD
                     RSVSSSLSDARDALVNAVVDPLSAYSSAVASVPRSTLTAPSSLKLLPLYVLALLKQKA
                     FRTGTSTRLDDRVYAMCQMKSQPLVHLMKMIHPNLYRIDRLTDEGAIHVNDRVVPQPP
                     LQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDSNFIENVLGYPDFASIPQKMTHLPEL
                     DTLPSERTRSFVTWLRDSRPLSPVLHLVKDESPAKTDFFQHLLEDRTEAALSYYEFLI
                     HIQQQVCK"
ORIGIN      
        1 cattctgaat ccgaacgttt ttgagcagtt gcacacccac cactgtgtga ccgtgaccta
       61 gttgggacca agatgcccaa atgacttgga taaagtagtc tttacttgcc agtcagcatg
      121 ctgaacggac cagggagatt gcttctaaga cttcactaag gtccagcaca gagtccaatg
      181 caagttccat ctgggtatgg gctgcctcat caaaactata tggtcccttc aggacattac
      241 tctcaaggac ctgggaaaat gacctccttg ccattggata gccagtgtga tagttactac
      301 tctcgtccat atacagtacc aacacaaaat tcggggactc ccagctcagc aaaccaacca
      361 ggagcacagc agatgtatgg cagaggtcct tccgctcctc acatgggggg ctccatgccc
      421 ggatctttcc aaggaattcc agcatcagca tcccattcct attcgagtgc ctcccagccc
      481 tactcctctc ttgggaatcg ctacagtagt cctaccacgt actctgccaa tgcttctgtt
      541 gcttctcagg gatatccctc tacctgtagt cattatccca tctcaactgt gtctaatgtg
      601 gtgtatccta atgtttccta tccctcgctg cctgccagtg agccatatgg gcagatgttt
      661 acctcacaga gtgctcctcc acctgccagg ccagttaaag agtcatactc tggccccagc
      721 acagctctta cctacccctc gagacctcca cctccacctt ctcagcacca gcagcagcag
      781 cagcagcagc agcagcagca gcagcagcag cagagtcatt caggatatag ttctctacca
      841 tggtcaggtc cagcccttcc accagcccaa gacagcctca tccgaaacca aatgggatcc
      901 ttggctacag cgaacagcca cccaactaat aatgaaaatg tccaacctcc caagtcaagc
      961 tccgtagtat ccacagtttt gccaggaccc tcatcaacaa gaatgccacc tgctccaagt
     1021 cacccagttg ggcctgtgcc ctctgctcca ccccccccag agcagatgca gactaaaggc
     1081 atgcagtatg gtgactatgg taataatcaa gctagctcca cagcgactcc cttgtcatca
     1141 gcttccgatg atgaggagga gcaggaggag gatgaggaag caggtgttga cagctcttcc
     1201 accaccagca gtgcttcgcc cttgcccaac agttacgatg ccttggaagg aggcagctac
     1261 ccagatatgc attcttcttc agcaagcagc cctgttcctg accatgccct ggaacccagt
     1321 cccaccctcg cccaggctct gtctgcagcc cccactcccc ctgcagctca gccagccaag
     1381 gtggcaaagc cttttggcta tggctaccca gctctgcagc ctgcctatca gaacgcagca
     1441 ccaccaccca tgcccgcagc acatcccagc ggcccagcgt acactggata tcctcagcat
     1501 tacccaggtg tgaaccagct gtcctcaggt ctcggaggac taagcctgca gagttctcca
     1561 cagccagaaa gcctaagacc tgtcaacctc acccaggaga aaaatatttt acctccaact
     1621 cctatttggg ctcctgtacc taacctgagt gcagaactca gcaagttaaa ctgtagtcca
     1681 gactcgtttc gatgtacctt gaccagtatc ccccagacac aggctttact gaataaagct
     1741 aagcttcctt taggattgct gttgcatccc ttcagagacc tgacgcaatt gccagtgata
     1801 acctcaaaca ccatcgtgag gtgccggtcc tgtcggacgt acatcaaccc ttttgtgtcc
     1861 ttcattgatc agcgaagatg gaaatgcaac ctgtgttata gagttaatga tgttccagaa
     1921 gagtttttgt acaaccccct gactcggtct tacggagagc ctcataaacg gccagaagtc
     1981 cagaattcta ctgtggagtt catcgcatcc tcagactaca tgctccggcc tcctcagccc
     2041 gcggtctact tgtttgtttt agatgtgtct cataacgcag tggaagctgg gtatttgaca
     2101 gttttatgcc agtccttatt agaaaactta gacaagcttc ctggagattc acgaacaaga
     2161 ataggattca tgacttttga cagcaccatt cacttctaca atctacaaga agggttatcc
     2221 cagccgcaga tgttgattgt atctgatata gacgatgttt ttctgcccac gccggatagt
     2281 ctgcttgtga atctgtatga aagcaaagag cttataaaag acttactgaa tgcattacca
     2341 agtatgttca tcaataccag agaaacacac agtgcccttg gacctgcact tcaggctgcc
     2401 ttcaaactca tgtctcccac gggcggccgc gtgtctgtat ttcagacaca gttaccttcc
     2461 ttgggggcag gacttctgca gtccagagaa gatccgaatc agaggtcgag taccaaggtg
     2521 gtgcaccatc ttggccctgc aaccgacttt tataagaagc tcgctttaga ttgctcaggg
     2581 cagcaaactg cagtggattt gttccttcta agttcacagt attctgacct tgcttctctg
     2641 gcttgcatgt ccaagtactc tgcagggtgc atattctact atccatcttt ccactctacc
     2701 cacaatcctt cgcaagcaga aaagttacaa aaagacctaa aacggtacct cacgaggaag
     2761 attggatttg aagctgttat gagaataaga tgcactaaag ggctctcaat gcacactttc
     2821 cacgggaact tctttgtccg ctccaccgac ttactgtctc ttgccaacat caatcctgat
     2881 gctgggtttg cagtacagtt gtcaatcgaa gagagcctga cagatactgc cttagtgtgc
     2941 tttcagacag ccctgctgta cacatctagc aaaggcgagc ggagaattcg agtgcataca
     3001 ctgtgcttgc cagtcgtaag ttccctcgct gacgtttatg caggagtgga tgtgcaagcc
     3061 gctgtctgcc ttctcgccaa catggctgtg gaccgctcag tgtcatcgag cctgtcggat
     3121 gccagggatg ccctggtgaa cgctgtggtg gatcccctgt ctgcctacag ctccgccgtg
     3181 gcaagtgtgc cccgctccac cctgacagca ccaagctcac ttaagctgct cccactctat
     3241 gttttggcac ttcttaaaca gaaagcattt agaacaggga caagcacacg cctggatgac
     3301 cgtgtctatg ccatgtgcca gatgaagtcg cagccgcttg tgcatctcat gaaaatgatt
     3361 catcccaact tatacaggat agacaggctg acagacgagg gcgccatcca cgtgaatgac
     3421 agggtagtac ctcagccacc gcttcagaag ctgtctgcag agaagctgac ccgagaaggc
     3481 gctttcctca tggactgcgg ctcagttttc tacatttggg ttggcaaagg ctgtgacagt
     3541 aacttcatag agaacgtgct tggataccct gactttgcat caataccaca gaaaatgaca
     3601 catcttccag agctagacac acttccatca gaaagaacta gatcctttgt gacttggctc
     3661 agggacagcc gaccgttaag ccctgtcctt cacttggtaa aagatgagag ccctgccaaa
     3721 acagactttt tccagcattt gcttgaagac cgcacggaag ccgcactctc ctactatgag
     3781 tttctgattc acatccaaca gcaggtttgt aagtgacatc agcagagccg ggtcagctga
     3841 gcagctccgc agccatcgga gaagcacaca ggggactgga cacgaggtgt ttgctgctag
     3901 aagaacgatg cacatcactc tgaggcttgg gccagagatt aaggggaaga gagaacaaga
     3961 cacagcagag cccctccaag gacgctgagg cagcagacag agtcggtttt tgcgtcctct
     4021 caggagagca gcagtgcggt gcccctctgc cagccagcag acctgaggac cacggaatga
     4081 catgtcatgc tctggaacta gatagagtca tcgtacagtt agcattctgg acttgaactc
     4141 tgatgagaga tgccgaaggg cagcggcact gtggtactcg cttgtatgaa ttacttctta
     4201 acaggaacga ctcatgttca tgaaatgaat tcaacatttc cctgtaagga caatagagct
     4261 tcattacacg gactatagaa aaatatatat actgtacata agtgttacat ttgtaaagaa
     4321 aatgtaagct gtaactaaga agatgaattg cttcaactgt gctgcaatgt tggctgacaa
     4381 ctctgtcaca gtgagggaat gaggttgact aatgcatatt atgaattgag tccacaaaag
     4441 aaacatgaga ctttgtaatt ctgttaaatc ttttatgtgg atttatttat gatcagccta
     4501 ctaattaaaa atattttgct tgacagttgg tttggtggtt tgtttgtttg tagaagtttt
     4561 ttggttttgg tggtattggt gatatttttt aaacagtagg aatcttaaat ttgccgcttg
     4621 gagaagatgc aataccaagt ctcattcatt agtgaatgaa tacactgtca ttagtttgtg
     4681 gatacttcaa gtaattactg tttgtattct aaaaacatga tgttattttc agaatacatt
     4741 taatgactaa ggataatctt aaatctcatt taaattaagg atttttttcc tacctatttg
     4801 taatgagaat ttttttaaaa acatgtgact ttccttttta attgacttga tgattatcat
     4861 attgaactct gagagatttt tgttctgatc aggaattctg tcgttcccag caggctgttt
     4921 actataaaga ttggtgatga tcca
//
