LOCUS       NM_001417648            5873 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus SEC14-like lipid binding 5 (Sec14l5), transcript
            variant 2, mRNA.
ACCESSION   NM_001417648 XM_006522462
VERSION     NM_001417648.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5873)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 5873)
  AUTHORS   Quintens,R., Verreet,T., Janssen,A., Neefs,M., Leysen,L.,
            Michaux,A., Verslegers,M., Samari,N., Pani,G., Verheyde,J.,
            Baatout,S. and Benotmane,M.A.
  TITLE     Identification of novel radiation-induced p53-dependent transcripts
            extensively regulated during mouse brain development
  JOURNAL   Biol Open 4 (3), 331-344 (2015)
   PUBMED   25681390
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC124576.4.
            
            On Mar 7, 2023 this sequence version replaced XM_006522462.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR10223971.15667.1, BC157907.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849387
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-220               AC124576.4         153809-154028       c
            221-324             AC124576.4         153156-153259       c
            325-474             AC124576.4         135266-135415       c
            475-606             AC124576.4         133868-133999       c
            607-735             AC124576.4         133001-133129       c
            736-928             AC124576.4         131988-132180       c
            929-1041            AC124576.4         129031-129143       c
            1042-1231           AC124576.4         127838-128027       c
            1232-1320           AC124576.4         124867-124955       c
            1321-1391           AC124576.4         124707-124777       c
            1392-1563           AC124576.4         124359-124530       c
            1564-1698           AC124576.4         122376-122510       c
            1699-1833           AC124576.4         120654-120788       c
            1834-2061           AC124576.4         120107-120334       c
            2062-2240           AC124576.4         118821-118999       c
            2241-5873           AC124576.4         113733-117365       c
FEATURES             Location/Qualifiers
     source          1..5873
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 2.5 cM"
     gene            1..5873
                     /gene="Sec14l5"
                     /note="SEC14-like lipid binding 5"
                     /db_xref="GeneID:665119"
                     /db_xref="MGI:MGI:3616084"
     exon            1..220
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            221..324
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     CDS             262..2352
                     /gene="Sec14l5"
                     /note="isoform 1 is encoded by transcript variant 2;
                     SEC14-like 5"
                     /codon_start=1
                     /product="SEC14-like protein 5 isoform 1"
                     /protein_id="NP_001404577.1"
                     /db_xref="GeneID:665119"
                     /db_xref="MGI:MGI:3616084"
                     /translation="MVQKYQSPVRVYKYPFELVMAAYEKRFPTCPLIPVFLGSEVLGE
                     WRSTDGAVHTVERSCRLRVDAPRLLRKIAGVEHVVFIQRNVLNWRERTLLIDAHNETF
                     ASRVTVKESCRYTVHPENEDWTCFEQSASLDVRSFFGFESTLEKIAMKQYTANVKRGK
                     EVIEHYLNELISQGTSHIPRWTPAPVQEEDVRSQLVPQCPSSLDMEGPSDAPGPASEM
                     AIADGDKLDADYIERCLGHLSPMQESCLVQLRHWLQETHKGKIPKDEHILRFLRARDF
                     HLDKARDMLCQSLSWRKQHQVDLLLQTWRPPPPLQEFYAGGWHYQDIDGRPLYILRLG
                     QMDTKGLMKAVGEEALLQHVLSVNEEGQKRCEGNTRQFGRPISSWTCLLDLEGLNMRH
                     LWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLVSPFINENTRRKFLIY
                     SGSNYQGPGGLVDYLDKDVIPDFLGGESVCNVPEGGMVPKSLYLTEEEQEQADQLQQW
                     SETYHSASVLRGTPYEVAMEIPEGESVITWDFDILRGDVVFSLYHAKQAPKLSPQEPG
                     VRASGQLIDKSWILGVDYSRVEAPLICREGQSIQGSHVTQWPGIYLLQWQIHSSPESV
                     ACSLPGVDDVLTALHSPGPKCKLLYYCEVLASEDFRGSMSSLESCASRFSQLSATTSS
                     SSSGQSHSGSMVSR"
     exon            325..474
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            475..606
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            607..735
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            736..928
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            929..1041
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            1042..1231
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            1232..1320
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            1321..1391
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..1563
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            1564..1698
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            1699..1833
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            1834..2061
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            2062..2240
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     exon            2241..5873
                     /gene="Sec14l5"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5853..5858
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sec14l5"
                     /note="hexamer: ATTAAA"
     polyA_site      5873
                     /gene="Sec14l5"
                     /note="major polyA site"
ORIGIN      
        1 aggctgggca tgtctgtcac cgctctggtc cctcttctgc cctacaggcc actgtttgtg
       61 taggattgac aagaggctat tgagctcctg agttctgcgg tccgggcaag gcgcctcctg
      121 gtgatttggc gagctcagct cccaggtcaa gcaggtgcca gagcactgtg ctgtgttttc
      181 agcagttctg agggtgagcg gagcagcgga gcctgcgcat cttctgtgct ctctctgtcc
      241 tggtgacttc tgagttggaa catggtgcaa aaatatcagt ctcctgtccg agtatacaag
      301 tatccattcg agctggtcat ggcggcctac gagaagcgct tccccacctg cccgcttatc
      361 ccagtctttc tggggagtga agtcctgggc gagtggcgga gcacagatgg ggcagtgcac
      421 accgtggagc ggagctgcag gctgcgagtg gatgccccgc ggctgctgcg gaagattgct
      481 ggtgtggagc acgtggtctt cattcagaga aacgtcctga actggagaga gagaacgctg
      541 ctgatagatg ctcacaatga gacgtttgcg agccgagtga cagtgaagga gagctgccgc
      601 tacacagtcc atcctgagaa tgaagactgg acttgctttg aacagtctgc ctccctggat
      661 gtccgctctt tctttggctt tgaaagcacg ttggagaaga tcgccatgaa gcagtacact
      721 gccaatgtca agagggggaa ggaggtgatt gaacactatc tgaatgagct catttcccag
      781 ggaacatccc acattccccg ctggacacca gccccagtcc aggaggagga cgtccgcagc
      841 cagcttgtgc cccagtgccc tagctccctg gacatggagg gtcccagtga tgccccaggc
      901 cctgcttctg agatggccat agcggatggg gacaagctgg atgcagacta cattgagaga
      961 tgtctgggcc atctcagtcc catgcaggag agttgcctgg ttcagcttcg gcactggtta
     1021 caggagaccc acaaaggcaa gatccccaaa gacgagcata tcctgcgctt cctgagggca
     1081 cgagacttcc acctggacaa ggcccgggac atgttgtgcc agtccttgag ctggcggaag
     1141 cagcaccagg tggatctcct tctgcagacc tggcggcccc ctccccccct gcaggagttc
     1201 tatgctggag gctggcacta ccaggatata gatggccgcc ccctttacat cctgcgcctg
     1261 ggacagatgg acaccaaagg cctgatgaag gcggtaggag aggaagctct gctgcagcac
     1321 gttctttctg tcaatgagga aggacagaag agatgcgaag ggaacacgag acaatttggg
     1381 cgtcccatca gctcctggac ctgcttgctg gacctggagg gcctcaacat gcggcatttg
     1441 tggcgacctg gagtgaaagc cctactgcgg atgatcgagg tggtagagga caattacccc
     1501 gagactctgg gcaggctgct catcgtgcgt gctccccgag tcttcccagt gctatggaca
     1561 ctggtcagcc ccttcatcaa tgagaacacc aggcggaagt tcctcatcta cagtggcagt
     1621 aattaccagg gccctggcgg cctagtggac tatctggaca aggatgtgat ccctgacttc
     1681 ctcggagggg agagcgtgtg taatgttcca gaaggaggga tggtccccaa gtccctctat
     1741 ctgacagagg aggagcagga gcaggctgac cagctacagc agtggagtga aacctaccat
     1801 tctgccagtg tgctccgagg gaccccctat gaggttgcca tggagatacc agaaggggag
     1861 tcagtcatca cctgggactt tgatatcctc agaggggatg tggtgttcag tctgtaccat
     1921 gcaaagcagg cacccaagct cagtccccag gagcctggag tgagagccag tgggcagctg
     1981 attgacaaga gctggatcct gggggtggat tacagccgtg tagaggcacc cctcatctgc
     2041 cgggaagggc agagcattca gggctcccat gttactcagt ggcctggcat ctacctgctc
     2101 cagtggcaga ttcacagttc ccctgagagt gtggcctgca gtctcccagg tgtggatgac
     2161 gtcctgacgg ctctgcacag ccctggcccc aagtgcaagc tgctgtacta ctgtgaagtg
     2221 ctggcatctg aagactttag gggctccatg tccagcctgg aatcctgtgc cagccgcttc
     2281 tctcagctca gcgccaccac ctcctcttcc tcctctggcc agtcccacag tggctcgatg
     2341 gtgtccagat aactgctggg gacctgctgg cagcctgcga gcttctggca tcaggtggcg
     2401 ttgagaatga gaacgaagcc catctagaca cctgggaccc tgttggatgc agatggcgcg
     2461 gtgccacagc tggggtgtgg tgatcccacg gcagggaccc agagtgcaga gggagcttcg
     2521 cttcacggct cttgaggaga caaagacaga cagacccttt acttctgact ttcttttaaa
     2581 agccgagact tccggatgtt ctacctcttg tcccctggat ctggagtcta ggatgggacc
     2641 agggctgggt gccctctcac catttgctgt gactccctcc tcagggaggc gtgttctact
     2701 gtggggtcat cactgtttgg tgccaggaaa gtgcgcaagg gaatgtctct tccccaagtc
     2761 ccaggccact aggaagctct ccttagcctg cgggggcctg ggtccatgct gaacaatcac
     2821 agttgcaggg agagtgaagg agcacatgtt gccagcaggg tcagatgtct aatctggatc
     2881 aatcgccgtg atttggccag cttggatgac aggacatttc tcaggccaat cacgtgctct
     2941 ggaaagggca aggccagctg aaggactact ggcgggtggg tgactgggtc gatggtcacc
     3001 ttagagctta ttattcagct gtttgtgact gagcactgtc taagaagctg tgatgggagg
     3061 cagggctctg tttcctgcag gaaacagcct cccgtggctg tagttctgtt tccccctctg
     3121 tagagcgctt agccttaacc acccctgact tgaggaacat agggaagccc agggcttctg
     3181 cctagttcca ggcaatgatg gggtgatggg gtgactccag ccattcttgt ctccttccag
     3241 aggtctcctc ctggggggct gctcccttaa gctttctttc tgttttttgt tttgttttgt
     3301 tttgttttga actgaaaacc cttctctctg agtgttaggc attcctgctc agtccaggag
     3361 aacttagttc aggcgtgatt ggagtcagag tctcagcctg gtgcagggga tccccttggg
     3421 gtggaggtgg catctctatc ctggaactga tctgactcag ggactttctc caagactgat
     3481 atgactttcc caaacgctcc aagggggagt agtgggcctt cctggagacc aagacttctc
     3541 tctttttatt tcctggatcc acagaaggtg gtcactgttt gttgttgact tttggccagt
     3601 ctcagtcttt ctttggcgtt ttgcctagag agtggcttac catgtagaaa ttaggattga
     3661 ggcatagcat gtagaaatca ggatttctgg ttttccttag cccacactag tttccacccc
     3721 tgccaaccag cactgagcca caccgctgtc ctgggtttct gcccgactga agctttgtcc
     3781 acagctccag cctggcccag aagcgccacc atctgctctt ctctgtcagc ccggcataga
     3841 gttgggatca tttctgcagg tcagcaggct gagaggggtg gtttctggct gtggggccca
     3901 gtgagcaagc atggacttca tgttgtcagc aaccccaagt caagagcagc aggagtgcct
     3961 cccagtgatg ggaatcgtgg tcagaattct gccctgttct gctcttcagg aaaagcaatg
     4021 gaacacgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtctgt gtgtgtgtgt gtgtgtgtgt
     4081 cctctagaga gacattgaaa accagttgtc tccaaatcac cacgagcagc aattagtgat
     4141 attttcaatg acctttatta ttattattgt tattactact actattatta attatttgct
     4201 gttgttgcac agagactcag atccaggcct tggtcatgct gggcaatcaa tcactaccac
     4261 cgagccactg cacggtccat ttctgtggtg attgtttttg ttttgttttg tttgtgacat
     4321 ggtttcctgt gtcctgatct tgaactctat gcaaggctaa ggacgacctt aagctcctga
     4381 tccttctgct tctgcctctc agatttagag gctgctggtg tgtgccagtg tatctagcac
     4441 aagctggctg cgctcatgct gggcgagcat tctcccaccc cgcctcaatc cgagtccgtc
     4501 tcagtgacct ttaactgcac tgctaacctg actctccaac caaagcttga ctctgagaaa
     4561 cgctcagggg agaagctgtc tggcagcctt tgcacattta ccctgcagac actgtgacaa
     4621 acagagtgta acagggccct gaaggtctct tcctctctct ccacccccag ctaaaaccat
     4681 ttgatcaagg ggaattcctt ggtcctttgt ttggggtggc agaaaggggt cttgctgcag
     4741 gtatggctgg cccagcaggg ttcccagctg acctcaggcc tcttgactca acatctcttt
     4801 gcacacttgc ctcacaccct ctccctgctg agaggctgct gatggcagct tcaaaactac
     4861 tccgagtcac agagtctaag agaaagatgc ccctaactac aatctcctaa aacattctga
     4921 ctggcccggc tcaggtcaca cgtagcacta ctggaccagc aaggtctggt aaataggaag
     4981 tcctcttgaa gaggcctggg ttgtaacagg aacagatggc tgtggaggca tccactgtgc
     5041 cctcctacgt tggcactggg gaaagccagc aactaaaaat agcccaaggg tgccgggaag
     5101 atgaatcagg tggtaaaatg gccgtggtac aagcatgata tcccgagttt ggatccccag
     5161 cagccatgta aaaagccaga tgcagagatg cacacctgta gtctcagtgc tgggtggagg
     5221 caggaggata cctggagctc actgaccagc gtagttgaac tggtaagctc cacgttcagt
     5281 gagagaccct gtctcaaaaa agtaaagtgg agagcaaatg aagacaccca acacatggcc
     5341 ttcacactat accacacacg tgcacaaaat atcccataga agggcctgcc aagctgtcca
     5401 cggcctttcc tttccccaca ccccagggca gagaggtgtg tggtgtgggt ttctttcttc
     5461 attctgttca tttgtccact gtggccagat cctagagcaa tatgtctata tccttgaaac
     5521 cccagccttt ctttcactag ctgtgaaacc tcgtgcaggt gacttgactt ctctgtgctc
     5581 caacttcctc atctgtaaaa tggggtcagc agtgcctacc tcaccaggtg actgtgggac
     5641 aaagaagaat gtggctggaa aggcctccac atacagaaag cactcagggg agcactgctg
     5701 gaatcagggg cgtttgaatt gagtgctttt ctgccctgga atcccggaca tttctcttaa
     5761 ctctgaaaaa ctattcattc gggaagaacc acgttgttct tttcactgag ctggagaaca
     5821 ggtgctgctt aatcttgaga tctgacagaa gcattaaacg ctttacattt gaa
//
