LOCUS       NM_001166506            4724 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus SEC14-like lipid binding 1 (Sec14l1), transcript
            variant 2, mRNA.
ACCESSION   NM_001166506
VERSION     NM_001166506.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4724)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4724)
  AUTHORS   Kostenko,E.V., Mahon,G.M., Cheng,L. and Whitehead,I.P.
  TITLE     The Sec14 homology domain regulates the cellular distribution and
            transforming activity of the Rho-specific guanine nucleotide
            exchange factor Dbs
  JOURNAL   J Biol Chem 280 (4), 2807-2817 (2005)
   PUBMED   15531584
  REMARK    GeneRIF: the Sec14 domain regulates Dbs transformation through at
            least two distinct mechanisms, neither of which appears to directly
            influence the in vivo exchange activity of the protein
REFERENCE   3  (bases 1 to 4724)
  AUTHORS   Okazaki,N., F-Kikuno,R., Ohara,R., Inamoto,S., Koseki,H.,
            Hiraoka,S., Saga,Y., Seino,S., Nishimura,M., Kaisho,T., Hoshino,K.,
            Kitamura,H., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: IV. The complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (3), 205-218 (2004)
   PUBMED   15368895
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK047396.1, BB646963.1, BC086620.1 and AL627205.12.
            
            On May 10, 2018 this sequence version replaced NM_001166506.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086620.1, SRR1660815.221588.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4                 AK047396.1         2-5
            5-70                BB646963.1         1-66
            71-1600             BC086620.1         1-1530
            1601-1601           AL627205.12        214175-214175
            1602-3398           BC086620.1         1531-3327
            3399-3400           AL627205.12        221469-221470
            3401-4724           BC086620.1         3329-4652
FEATURES             Location/Qualifiers
     source          1..4724
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 81.99 cM"
     gene            1..4724
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /note="SEC14-like lipid binding 1"
                     /db_xref="GeneID:74136"
                     /db_xref="MGI:MGI:1921386"
     exon            1..184
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            185..277
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            278..427
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            428..559
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            560..688
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            689..923
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            924..1033
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            1034..1223
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            1224..1312
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            1313..1383
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            1384..1555
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            1556..1690
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            1691..1825
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            1826..2077
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            2078..2256
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     exon            2257..4724
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4702..4707
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /note="hexamer: AATAAA"
     polyA_site      4721
                     /gene="Sec14l1"
                     /gene_synonym="1200017E04Rik; 2810012L19Rik; Naa-35"
                     /note="major polyA site"
ORIGIN      
        1 acccgtaaca accactcgag ccctcgccgc gcccctcggc cctcccgccc cggcccctgt
       61 ccccggaacc ggcggtcgag cggcggcagc cgagcctgtg gcacggctct ctcttcgggg
      121 agccgccggc atgaacgcat cccgccaccg cgccgcgtcc ccgacccggt ccttctgaca
      181 agaggagtaa gaagactgct attgaattac aaccatggtg caaaaatacc agtccccagt
      241 gcgggtgtat aaacatccct ttgagttaat tatggctgcc tatgagagga ggtttcctac
      301 atgtcctctg attccaatgt tcgtggacag tgacactgtg agcgagttca agagtgagga
      361 tggggctctt catgtcatcg agaggcgctg caagctggat atagatgcgc ccaggctgtt
      421 gaagaagatc gcaggagtcg attacgttta ttttgtccag aaaaactccc tgaattctcg
      481 agatcgcact ttgcacatcg aggcccacaa tgagacattt tctaaccggg tcatcatcca
      541 cgaacactgc tgttacacgg ttcaccctga gaatgaagac tggacctgtt tcgaacagtc
      601 tgcaagttta gatatcaaat ccttctttgg ttttgaaagt acagtggaaa aaattgccat
      661 gaaacattat acaagcaaca ttaaaaaagg gaaggagatc attgaatact acctacggca
      721 gctggaggag gaaggcatca ccttcgtgcc ccgctggacc ccaccccccg tgggaccctc
      781 agaaacatgt tcatcaagca agaatcaagt cacatctgca gctgtccttg tcccagatgc
      841 tgctgccgtc atggaggggc tgagtgggga aaacctcagt agcccaggaa cagcgtctga
      901 gcccgtggtg ggaacccctg acgataaatt agatgccgac tacatcaaga gatacttggg
      961 tgacctgact cccctccaag agagctgcct cattcgactg cgccagtggc tccaggagac
     1021 acacaagggc aagatcccaa aggacgagca tatccttcgg ttcctgcgtg cccgggattt
     1081 taatattgac aaggccagag agatcatgtg ccagtctcta acctggcgga agcagcacca
     1141 ggtggattac atcctggaca cttggactcc gccccaggtc cttctggact actacgctgg
     1201 gggctggcat caccatgaca aagatggacg gccgctgtat gtgcttaggc tgggccagat
     1261 ggacaccaaa ggcttggtgc gagctctcgg agaggaggcc ctactgcgat acgttctttc
     1321 cataaacgaa gaaggcctga gacgatgcga ggaaaacacc aaggtcttcg gccggccaat
     1381 cagctcgtgg acctgcttgg tggaccttga aggactgaac atgcgccatc tgtggagacc
     1441 aggggtcaaa gccttgctgc gcatcatcga ggtggtggag gccaactacc cggagacgct
     1501 gggccgcctc ctcatcctcc gagcccccag ggtcttccct gtcctctgga cgctggttag
     1561 tccatttatt gatgacaaca ccagaaggaa gttcctcatt tatgcaggaa atgactacca
     1621 gggcccagga ggcctgctgg attacatcga taaagagatt attcccgatt tcctgagtgg
     1681 ggagtgcatg tgtgacgtgc cagagggtgg attggtcccc aaatccttgt acaggactgc
     1741 agaggagctg gaaaatgaag acctgaagct ctggacggag accatctacc agtctgccag
     1801 cgtgttcaaa ggagctccac atgagattct cattcagatt gtggacgcct cctcagtgat
     1861 cacctgggat tttgatgtgt gcaaagggga catcgtcttt aacatttatc actccaagag
     1921 gtctccccag ccacccaaga aggactcgct aggggctcac agcatcactt ccccaggagg
     1981 caacaacgtg cagctgatag acaaagtctg gcagctgggc cgggactata gcatggtgga
     2041 gtctcctcta atctgcaaag aaggagagag cgtgcagggg tcccatgtga ccaggtggcc
     2101 aggcttctac atcctacagt ggaaattcca caccatgcca gcatgtgctg ccaccaacct
     2161 accccgagtg gacgacgtgc tggcctccct gcaggtctcc tcccacaagt gcaaagtcat
     2221 gtactacaca gaagtgatcg gctctgaaga tttcagaggc tccatgacca gcctggaatc
     2281 tagccacagc gggttctcac agctcagtgc cgccaccacc tcctccagcc agtcgcaatc
     2341 cagctccatg atttccaggt agtgccgcga agcctgcgcc tgcgcggagg gcgggcgccc
     2401 cggctgctgt gctccgccca ccccaggatg tgcagactcc gcccacccct ggatgtgcag
     2461 actcctccct ctagatagca gctagatctg cagatggtca ctagtcacct ggtccccaga
     2521 ccatcctgag aggtagtttt aactctaccc ctaactttaa ctcaatagcc atagattttg
     2581 tatacagcgt gcacaaaatc aaaccagagc acaagggctc tcgaaagaaa agtagtttat
     2641 ctacagtaag agactgactg gtctcagttg tcgatgcaaa aaatgttacc aacaaactcc
     2701 accttgtcca ctagtgaatg acttgtgtga caccctgcag agactcgcca cctcctcctc
     2761 cacggaaccg aagctgcagc aggcagccct taagctgcag cggagtcctc tcggctccct
     2821 gttagtggag gtggcctgtg gatccagaac agctcttgag gtccctttcc gctaaggact
     2881 tggcagcctg aggagcaccc agtgctgggt cagagccagc ctgatcccga gcagacactg
     2941 cagcccagga ggggctgcca gggctcctcg tgaatcctga caacaccgcc atcattaaac
     3001 attgctttct ctttcctcct cttcaaatct tttgatattt ttcagagcaa aatttttctg
     3061 tccgtgaact tggtggaggg gatggggagg attctttccc tctgctgagt gctgcctttc
     3121 cttctgcagg aggcggctct gtgcccgtag cacccagggt cctcagtcct ctcagaaccc
     3181 agggtcctca gtcctcccaa aacccagggt tctcagccct tagcacccag ggtactcagt
     3241 cctcccaaaa cccagggttc tcagccctta gcacccaggg tactcagtcc tcccagcagc
     3301 acccagagtc ctcagtcttc ctagcaccca ggatcctcag tcctagcacc cagggtcctc
     3361 agctctcagc agggtgtttg gaagcagtag gtcacacttg cctttagaag tgtggcagtg
     3421 caaactctag caatgctctc caggggggtg catggcttgc agtggccttc ggcatgtggg
     3481 tggatgctgg gtatgtgtgt aggtgttgtg tgtgtgcatg agggagtggg gtgtagctgg
     3541 ggaggggctg cagatctgca cttgttcttc tgcgtttcat agaagcaggt cagaggctgg
     3601 ggctagtttg ccttttttct tctttctttt ttttcccctg atcttgactc cccagagcct
     3661 gctgttggag cagatccttg ctttacggct tttatgggga aagcatgctt cttagcgaac
     3721 tgtctagaag ttgcaggtgg ctgatctcca gaggaggggg gcccaggatc tacttgtgtg
     3781 tgtgtggtaa cagtgtctaa agatgtgtgc caaatccgag tggccatgag agtgtatggc
     3841 gggagtggat gcctgtgtag acgctgctct gaggctctgg gtggctggct gtgcggtgag
     3901 agctatggag aggctgtggc atgtcagcaa gcatgaggag agccgacaca gcagcctggc
     3961 ttggccgatg agccccctgg ctcctggcac cctgagccgt gcttgagcct ctgtttggtg
     4021 gcctttctgg cccactgcca tgcctttcct gtctgtggga gcgcttgtac acagcacagc
     4081 agggctgtag ctaccgcgtc catgctgctt ccagtcaggg cttcccagct ccgagtgaaa
     4141 ggacctgaag atgcccctgc tctttctctc ttctctctcc cttcccctct ccctttctcc
     4201 atgtcccaga tggcgatttt gctgacatcc tccaagaaag cgcttcactc gacagcccac
     4261 atgtgcccag agatgtttgt agacctatct gagtcgcagc catgtcccag gctgaagagc
     4321 tgttcccctt aagtccatgc cgaagaggca ctgttgaacc ccccagagct gagagcatct
     4381 ttaagagctc aaagcacaca actgcacact cacaggccct cagcttcccc gagccacagg
     4441 gcactggctg ccctgtaagg ggaggctggc tacgaggtga ccgtgtggct cgcacacggg
     4501 gctgctcctc ccagtgccca gcacctccta aaatgctgct ccctccactc tgggctctcc
     4561 ctgtttctag tgtcttaacc cattctcctt cctgaatcca ttctttgcat atcagattct
     4621 gtaaatgttt tgtaaacata ttacctcact cttggtaata caatactgat agtctttaaa
     4681 agattttttt attgttacaa taataaatgt gaactgttta agaa
//
