LOCUS       NM_172713               5020 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus SDA1 domain containing 1 (Sdad1), mRNA.
ACCESSION   NM_172713 XM_289899
VERSION     NM_172713.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5020)
  AUTHORS   Rios,J.J., Denton,K., Russell,J., Kozlitina,J., Ferreira,C.R.,
            Lewanda,A.F., Mayfield,J.E., Moresco,E., Ludwig,S., Tang,M., Li,X.,
            Lyon,S., Khanshour,A., Paria,N., Khalid,A., Li,Y., Xie,X.,
            Feng,J.Q., Xu,Q., Lu,Y., Hammer,R.E., Wise,C.A. and Beutler,B.
  TITLE     Germline Saturation Mutagenesis Induces Skeletal Phenotypes in Mice
  JOURNAL   J Bone Miner Res 36 (8), 1548-1565 (2021)
   PUBMED   33905568
REFERENCE   2  (bases 1 to 5020)
  AUTHORS   Tarantino,C., Paolella,G., Cozzuto,L., Minopoli,G., Pastore,L.,
            Parisi,S. and Russo,T.
  TITLE     miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic
            stem cells
  JOURNAL   FASEB J 24 (9), 3255-3263 (2010)
   PUBMED   20439489
REFERENCE   3  (bases 1 to 5020)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK029881.1.
            
            On Apr 6, 2007 this sequence version replaced NM_172713.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK029881.1, SRR17253014.659829.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-5020              AK029881.1         3-5022
FEATURES             Location/Qualifiers
     source          1..5020
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 46.42 cM"
     gene            1..5020
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /note="SDA1 domain containing 1"
                     /db_xref="GeneID:231452"
                     /db_xref="MGI:MGI:2140779"
     exon            1..233
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            234..338
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            339..437
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            438..548
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            549..620
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            621..721
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            722..779
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            780..854
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            855..956
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            957..1026
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1027..1130
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1131..1188
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1189..1247
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1248..1324
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1325..1422
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1423..1499
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1500..1626
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1627..1721
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1722..1912
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1913..1997
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            1998..2159
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     exon            2160..5020
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2284..2289
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /note="hexamer: ATTAAA"
     polyA_site      2325
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /note="major polyA site"
     regulatory      4981..4986
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
                     /note="hexamer: AGTAAA"
     polyA_site      5004
                     /gene="Sdad1"
                     /gene_synonym="4931421J16"
ORIGIN      
        1 ggtcgggcaa gcggcgtgtc ccacgtgccg tttccggtta cactgggacc cacgagtcta
       61 agctgccgcg gggcccgggc tgcgactgac agaggcggac gttttccaag cactgctcgc
      121 cagggagccc acccacagcc accatgtccg gcaggaacaa caacaagctg cccagcaacc
      181 tgccgcagtt acagaacctg atcaagcggg acccgccggc ctacgtggag gagttccttc
      241 agcaatataa ccactataaa tccaatatgg agattttcaa gttacaacca aataagccca
      301 gcaaagagct ggcagagctg gtgatgttca tggcgcagat tggccagtgc tacccggagc
      361 atctcagtaa cttcccgcag gagctgaagg acctgctctc ctacaaccac actgtcttag
      421 acccagatct ccgcatgacg ttttgcaaag ccttgatctt actgagaaac aagaatctca
      481 tcaatccatc aagtttgcta gagctcttct ttgagctgct gcgctgccac gacaagctcc
      541 tgcggaagac tctgtacaca cacattgtga ctgacatcaa gaacatcaac gccaaacaca
      601 agaacaacaa agtgaacgtg gtgctgcaga acttcatgta caccatgttg agagacagca
      661 atgcaaccgc agccaagatg tccttggatg tgatgatcga actctacaga aggaacatct
      721 ggaatgatgc caaaactgtc aatgttatca caactgcgtg tttctccaag atcaccaaga
      781 tattggttgc tgctttgacg ttcttccttg ggaaagatga ggaagagaag caggacagtg
      841 actcagaatc cgaggaggat gggcccacag cgagagacct gctggtgcag tatgccacgg
      901 gaaagaaagg ctccaaaaac aagaagaagc tggaaaaggc gatgaaagtg ctgaagaagc
      961 aaaagaagaa gaagaaacca gaagtgttta acttttcagc tattcacttg attcatgatc
     1021 cccaagactt cgcagagaag cttctgaagc agctggagag ctgtaaggag cggtttgagg
     1081 tgaagatgat gctcatgaac ctcatctcca gattggtggg cattcacgag cttttcctct
     1141 tcaacttcta cccttttgtg caaaggtttc tgcagcccca ccagagagaa gtcacgaaga
     1201 tccttctgtt tgctgcacaa gcctctcatc acctggtgcc cccagagatt attcagtcgt
     1261 tgcttgtgac ggtggccaac aattttgtta ctgacaagaa ctctggggaa gtcatgaccg
     1321 tagggatcaa tgctataaaa gagatcacag ctcgatgtcc tctggccatg actgaagagc
     1381 ttctccagga cctggctcag tataagacac acaaagataa gaatgtgatg atgtctgcca
     1441 ggactttgat ccatctcttc cggacattga accctcagat gctgcagaag aagttccggg
     1501 gtaaacccac tgaagcctcc atcgaagcaa gaatacaaga atatggagaa ttagatgcta
     1561 aagattacat cccaggagca gaggttctag agcttgagaa gggagataat acagaagatg
     1621 atgaagatgg atgggaaagc gccagcctca gtgaggagga ggaagaggat ggtgagtggg
     1681 ttgacgtgca ccactcttct gatgaggagc agcaagcaat tgccacgaag ctggacagca
     1741 tgcccatgga ggagcggaaa gccaaggctg cagccatcag caccagtcga gttttaacgc
     1801 aggatgactt ccagaaaatc cgcatggccc agatgaagaa ggaaatggat gctgctccgg
     1861 ggaaagccca gaaaaggaaa tacttagaaa ttgacagtga cgaggagtcc aggggtgaat
     1921 tgctgtctct tcgggacatt gaacgccttc ataaaaagcc caagtctgac aaggaaacga
     1981 gactagcaac tgcaatggct ggaaggacag accgaaagga gtttgtgagg aagaaaacca
     2041 aaataaaccc attttccagt tccacaaaca aagagaagaa aaagcagaag aactttatga
     2101 tgatgcggta tagccagaat gtccggtcaa aaacagcacg gtccttccgg gagaagcagc
     2161 tagcactacg agatgcactt ctgaaaaaga ggaaaagaat gaagtaactt atcagcaaat
     2221 tatccatttc ctgccccatg ctgtgtgtat cagcatgcca aaaattagta aacatttgtt
     2281 tacattaaag agtcaaggaa cactataatt tgtaaaccac agtaacattt gtagcaattt
     2341 ggtattctta attgggaggt ggggctggtg ggaatgtgaa atgtaaatag tagcaatgtt
     2401 aagaagtgct gagtacctac tgattgctgc tgcctatgta gctgaatgag ccagagccct
     2461 tgactgaggg cagatgtaca tacggtgttt atagtaagct gtacatagtt ccctggtggc
     2521 agctagtccg tcttcctggg gtcactgggc tcctggacta actgtgcggg gatgggagtt
     2581 attcatgctc tgcaatcagg acagtgttac aagagtaaga ggttcttact tgtaaatagg
     2641 cttgcctgct caaacaggct cctgctgtac agattcaggt agacagttga gctccactct
     2701 tttatttttt tagtataaag agtttttgct aagctctcat tttttttaat tgccttaagt
     2761 ctaaatagtg attttgaaat gcctagcagg gtgtggtggc acacacccat aatcccagca
     2821 cttgggaagt caaggcagga ggctcgtgag tttagaacca acttgacatc ctgagttagt
     2881 tcagggcagc ctgagctacg taattgagaa gcaaagctat ctttgagcta tcgttgggtg
     2941 gctggttctc tgctgcctgt tgctgttggg gtttgttttc ctttctttcc tgtgcgggag
     3001 gcgagccctg ggccctcttg ctcaccctga gcaggttctc cctgggcttc accccacccc
     3061 tgagtgccta ctcttcacat ggtttgatca gttcccgtgc cttgttctca accaaagcta
     3121 caggtggtta gtagtcagat gggtgtgtac cgcggtgtgt gctgctgttg ccacacgtga
     3181 atgcattgca ggacccagtc tgcatgcagg ctgctggctt tagaagcagt ttgatgcctt
     3241 ttgcctcaga cttcctaggt gctattgtca tgagaacagg tttgatgttc acgttagagg
     3301 aagggcagtc tctgcccctg ggctggagag caactgctgc tggttgcctt cctctccatc
     3361 gatggctctg ttcagcttct gaggtcgact tgggtttatt tgtcccttgc tttccccaac
     3421 ggtgcccagg tcactgtagg ggactgcccg tcagcctcac ccagcactgc tgtggaggaa
     3481 gtttctggtg cctatctgtg tgtgtgagac ctgaagccgt cccttggcct tcttcctgtg
     3541 ttcctcacgg gtgtgtgctc aggaaccagc tctgagcagc cggagctctg aaagcagctg
     3601 gagctcccag cccctgggac ttcaggcaca cagtaccaag gccagttcta ggctgctggg
     3661 tcatacccag ggattggcat agaaatccag aatgccagca tgccacatgc atggcattag
     3721 caaagttcac aggacgctct cgcctgttcc ctgcagcatc tctggtgcta gctaagggtc
     3781 tcctatgatg tagagggcac agcagctgtt tgaacatgag gattaacccc agcctgccac
     3841 ggtttccatc tgtaaatgtt agaccaccta cctctctttt agtaaattgt gttttgggag
     3901 ggtttttgtt gttgttgttt tccttatagt tgctatgttt attttaacca tccaacccaa
     3961 tgtttaggca gctagtgtaa agcccatatt gaatatccat tgtgtataaa gcactgctag
     4021 atgtttgtgt catgttgaaa cttattccca atgcgtgtgg taggcaggac cgcactgtag
     4081 aaaacagttc ctaagtccgg tggctactgg aatagttttt aaatgttaca gttaatgcaa
     4141 attttgtttt ttgaaaatgt ataatgtata tagagtatta cattgaaatt tcagtttaaa
     4201 atgtataatg tttgtagagt attacgttga aatttcagtt taaaacgttt aattgttctg
     4261 agtgtcctgt ttaagctctt ctaggtgaca tatttttaaa ctctctctag atgatgtttt
     4321 ctcccaaata gtaccctctc gttccttaca tggtttggag tgtatttctc gagatttagg
     4381 gaggctttac caggtatggg gacacacacc tgtaacccca gcacttggga gaatgaggca
     4441 ggcagtgggg tgctctgggt tgagaccaca tagcaagaga gcaaaaccct gtctgggggc
     4501 ttgggggtgg ggtgaggata tgaaatgggg gaagagtaga gagagcttga ccaaaagaag
     4561 aaagcttgca gcagctggaa ctctgggtca ggtcagagct ccgggattaa gcctttcctg
     4621 tcgtctctgc ttctcaccca tgtgaagata caaaggaaag cggagagcac agcagcttca
     4681 gccacagtca acagcacaac tcctcttcct ataaggctgt ctgtgtcatt ttctcctgca
     4741 gattctgctt gtgtgttttg accatctcat ctcagtgtat aagtagctaa agtttgaaaa
     4801 ggatttgtag cataattcag tgtacatgta ggtaattata aaaaaatcca gaaaatgtgc
     4861 caaatattag ggggtgggag ttggtgctgg gatcatgtgt aaggtgtatt ttctttctac
     4921 tttctgagtc tttcacggtg tatatgtttt tacttaatgt cattgtgtaa gaaaccaaaa
     4981 agtaaaagtg aggtgagaaa taaaggtctg tggcaaatcg
//
