LOCUS       NP_062682                 82 aa            linear   ROD 01-JUN-2024
DEFINITION  short coiled-coil protein isoform b [Mus musculus].
ACCESSION   NP_062682 XP_990616
VERSION     NP_062682.1
DBSOURCE    REFSEQ: accession NM_019708.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 82)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY251609.1, BC092071.1 and AU042937.1.
            
            On May 4, 2006 this sequence version replaced XP_990616.1.
            
            Transcript Variant: This variant (2) represents use of an alternate
            promotor, differs in the 5' UTR, and initiates translation from a
            downstream start codon compared to variant 1. The resulting protein
            (isoform b) is shorter and has a distinct N-terminus compared to
            isoform a.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC017629.1, AK076085.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 40.22 cM"
     Protein         1..82
                     /product="short coiled-coil protein isoform b"
                     /calculated_mol_wt=9223
     Region          13..73
                     /region_name="DUF2205"
                     /note="Short coiled-coil protein; pfam10224"
                     /db_xref="CDD:431150"
     CDS             1..82
                     /gene="Scoc"
                     /gene_synonym="0610011C06Rik; 2810002J11Rik; SCOCO"
                     /coded_by="NM_019708.4:292..540"
                     /note="isoform b is encoded by transcript variant 2"
                     /db_xref="CCDS:CCDS52608.1"
                     /db_xref="GeneID:56367"
                     /db_xref="MGI:MGI:1927654"
ORIGIN      
        1 mmnadmdavd aenqveleek trlinqvlel qhtledlsar vdavkeenlk lksenqvlgq
       61 yienlmsass vfqttdtksk rk
//
