LOCUS       NM_001415796            2970 bp    mRNA    linear   ROD 14-JUN-2024
DEFINITION  Mus musculus stabilizer of axonemal microtubules 2 (Saxo2),
            transcript variant 1, mRNA.
ACCESSION   NM_001415796
VERSION     NM_001415796.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Stauber,M., Weidemann,M., Dittrich-Breiholz,O., Lobschat,K.,
            Alten,L., Mai,M., Beckers,A., Kracht,M. and Gossler,A.
  TITLE     Identification of FOXJ1 effectors during ciliogenesis in the foetal
            respiratory epithelium and embryonic left-right organiser of the
            mouse
  JOURNAL   Dev Biol 423 (2), 170-188 (2017)
   PUBMED   27914912
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC138270.12.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784645.271355.1,
                                           SRR7652917.1038551.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-137               AC138270.12        172078-172214       c
            138-317             AC138270.12        169336-169515       c
            318-520             AC138270.12        167333-167535       c
            521-2970            AC138270.12        156644-159093       c
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 47.25 cM"
     gene            1..2970
                     /gene="Saxo2"
                     /gene_synonym="1700129I04Rik; D030069K18; Fam154b"
                     /note="stabilizer of axonemal microtubules 2"
                     /db_xref="GeneID:330577"
                     /db_xref="MGI:MGI:1914618"
     exon            1..137
                     /gene="Saxo2"
                     /gene_synonym="1700129I04Rik; D030069K18; Fam154b"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..1464
                     /gene="Saxo2"
                     /gene_synonym="1700129I04Rik; D030069K18; Fam154b"
                     /note="isoform 1 is encoded by transcript variant 1;
                     protein FAM154B; family with sequence similarity 154,
                     member B; stablizer of axonemal microtubules 2"
                     /codon_start=1
                     /product="stabilizer of axonemal microtubules 2 isoform 1"
                     /protein_id="NP_001402725.1"
                     /db_xref="GeneID:330577"
                     /db_xref="MGI:MGI:1914618"
                     /translation="MRNWCLCQICTCGRHRCPHGTTRVYEYSDVSCPTTEYLEKYPKY
                     GGVLPPQSLKPKQGFQAYRGKMEGITTFKSDYRPYEIVKQPRHIPEEYKPKQGKIDLG
                     TTYKRDFNPYKVQPLIKVRPVERQQVKKGKLDTVPTYKDDYRSWDIQKCELCKPEQAY
                     HPPDVKFGNSTTFQDDYVPQEIKPRQSFKPCSVVKCSVGPFNGDTSHRRDYVPHQLEV
                     KFARPKEIYKPTDQPFEDLTTHRNDFQGLAGETAKICRPAYTRVTQNIQFKGSTEFRD
                     SFQPWEIPPPKVKKVAEYVPPSGSMQLNSTSHLDYVPYQASRVVAIRPVSHRRQSNFP
                     FQGKSTTKEDFPAWEICRQGLIKQQQQIPNPSGKFEGLSTFRSHFVPHELIPTESCKP
                     LNEALKSSVPLDDVTMYSIQFTPKKQEICPASYPSPPGYIFENTNSQGHKFFRKIIPA
                     VKAF"
     exon            138..317
                     /gene="Saxo2"
                     /gene_synonym="1700129I04Rik; D030069K18; Fam154b"
                     /inference="alignment:Splign:2.1.0"
     exon            318..520
                     /gene="Saxo2"
                     /gene_synonym="1700129I04Rik; D030069K18; Fam154b"
                     /inference="alignment:Splign:2.1.0"
     exon            521..2970
                     /gene="Saxo2"
                     /gene_synonym="1700129I04Rik; D030069K18; Fam154b"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2946..2951
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Saxo2"
                     /gene_synonym="1700129I04Rik; D030069K18; Fam154b"
                     /note="hexamer: AATAAA"
     polyA_site      2970
                     /gene="Saxo2"
                     /gene_synonym="1700129I04Rik; D030069K18; Fam154b"
                     /note="major polyA site"
ORIGIN      
        1 aacttggagt tccgcggtcg ccttgacgac ggcggacgct gtagctgctc tgaagtgtgc
       61 cagcctaagc ctgcggaggg ggacgctgga gcgcagagca tgaggaactg gtgtctgtgc
      121 cagatttgca cctgcggacg gcatcgctgt ccacatggaa ccacaagggt ttatgaatat
      181 tctgacgtat cttgccccac gacggagtat ttggaaaaat atccaaaata tggcggtgtt
      241 cttccacctc agagccttaa gccaaagcaa ggatttcaag cataccgtgg taaaatggaa
      301 ggaataacca catttaagtc agattatcgc ccttatgaaa tagtcaagca gcctcgccac
      361 atacctgaag aatataaacc caaacagggg aaaattgatc ttggtactac ctacaagcga
      421 gattttaatc cttacaaagt acagcctttg ataaaagtcc ggcctgtgga aagacaacaa
      481 gttaaaaaag gaaagttgga cactgtccca acttataaag atgattatag atcttgggat
      541 attcagaaat gtgaactgtg taaaccagag caagcttacc atcccccaga tgtgaaattc
      601 ggaaactcaa ctacatttca ggatgactat gttccccagg agataaagcc taggcaaagc
      661 tttaagccct gctctgtggt caagtgttct gtaggccctt ttaatggtga tacaagtcat
      721 cgtcgagatt atgtacctca tcagctagaa gtcaagtttg caaggccaaa agaaatttat
      781 aagcctactg accagccttt tgaggatctc accactcacc ggaatgactt tcagggtctt
      841 gctggtgaaa ctgcaaaaat ctgcagacct gcctatacca gagtgaccca aaacattcag
      901 tttaaaggaa gtactgaatt ccgtgacagt ttccaaccat gggaaatccc accacccaaa
      961 gtcaagaaag tggcagagta tgtacctcct tcaggaagca tgcagttaaa cagcaccagc
     1021 cacctcgact atgttcccta tcaggccagc cgcgtagttg ccattagacc agtttctcac
     1081 agaaggcaaa gcaattttcc tttccaagga aaaagcacca cgaaggaaga ttttccagca
     1141 tgggaaattt gtcgccaagg acttattaag cagcagcaac aaattcccaa cccatctgga
     1201 aaatttgagg gtttgagcac tttcagatct cactttgtgc cacatgaatt gattccaaca
     1261 gagagctgca aacctttaaa tgaagctctt aagagttcag ttccacttga tgatgtcacc
     1321 atgtattcta tacagttcac accgaagaaa caggaaatct gcccagctag ctatccttct
     1381 cctcctggtt atatatttga aaatacaaat tcccaaggac ataaattctt tcgcaagatt
     1441 attcctgcag tgaaggcctt ttagtaatca atgtttaaaa gaaagctaat gagattttga
     1501 tttttaaaga gaaaccccaa cttttatagt aaaaatatga gagctataca atttttagct
     1561 ttttgaacaa gttggaacat aaagatcaga attgataaat ccatatattt tgaaccaaga
     1621 tcatcctgtt tagcacaggc taccctggaa cttgcagtcc tcctgtgtca gtcttctgat
     1681 ccaagattat tctttaacag gcatatctga aggctaaatg ataggtacgc ccatttatac
     1741 atgctgactc ttagtttgtt gtcacctcat tttacactta tgcaattata cagctcctct
     1801 catcatcatt tatcaagtat attgggacta tctagaaaaa aattgaagat aagctataaa
     1861 ttacactttt caaaaaatcc aggtttaact cattgattga ttgattgatt cattcattca
     1921 ttcatcttca gtacatctac agagaatagg acaagtcaag ttttggttgg tgatgtcaga
     1981 gactactgct ctgtttcttg ccctgttcaa aatagcaaga gacattgtgg cttgaagagg
     2041 aaatgtccta taggatggga ctcagaggac cagagttcaa gtactgatat cttcggttta
     2101 tatttgagcc actgtaagca acctcttgca tacacacgcc tgtggttcat ctgttaaaga
     2161 atattgattc tgcctacctc acaaaagttt gttgggagta tcaaattcta taatacattt
     2221 aaatgcataa agtaaaaatg taaggggcta ttaaacactc ggataacttt ttgaactttt
     2281 tcattttcaa ataaggatag ttacaaactt aatactcatt acttggtctc catacagcaa
     2341 ggactataaa ataacctaat ttgctttgac taaagtcata aatgagtaat gtgtgtttgt
     2401 aagaggcatc tgcccactat agcttcataa acaccctata agttatagca gaaaatagag
     2461 aacctagatt aaatactcgg atgtaaatgg ctgtattttc aaaaggaaaa atatttgctt
     2521 aaaaagttgt agggaagact tccagttctg acaaaatttt caggataaac ctaggtatgt
     2581 gttcattcag tggccacatc cagaaacatt gttcatttat gagggctata actaccttgt
     2641 tcattactga aagtataaag tgcaaagaag gacggggaag agataccagt aaaggaccta
     2701 gaaatagcat actatactta caaatgttga atgcttcaag tgagtgtttt aataaatgat
     2761 catgtatgga aaataagatt gacttcaatt taaaatgaat tgtaatgttt cacagtttaa
     2821 gaatattact aagagtgaat taaaaacatg taataactaa ttttaattaa ttgaaagcaa
     2881 ttctccatat ttgcatttat tataaaaaga taaatgaaaa attatgtttt atgtataatc
     2941 tgattaataa aatgtattga ttttcatgaa
//
