LOCUS       NM_023893                953 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus suppressor APC domain containing 1 (Sapcd1),
            transcript variant 1, mRNA.
ACCESSION   NM_023893 XM_894633 XM_901740 XM_901743 XM_903694 XM_903951
            XM_903952 XM_912027 XM_922244 XM_922249
VERSION     NM_023893.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 953)
  AUTHORS   Liu,X., Jiao,Y., Cao,Y., Deng,N., Ma,Y., Hasty,K.A., Kang,A.,
            Chen,H., Stuart,J.M. and Gu,W.
  TITLE     Decreased expression levels of Ifi genes is associated to the
            increased resistance to spontaneous arthritis disease in mice
            deficiency of IL-1RA
  JOURNAL   BMC Immunol 17 (1), 25 (2016)
   PUBMED   27480124
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 953)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   4  (bases 1 to 953)
  AUTHORS   Lachke,S.A., Ho,J.W., Kryukov,G.V., O'Connell,D.J., Aboukhalil,A.,
            Bulyk,M.L., Park,P.J. and Maas,R.L.
  TITLE     iSyTE: integrated Systems Tool for Eye gene discovery
  JOURNAL   Invest Ophthalmol Vis Sci 53 (3), 1617-1627 (2012)
   PUBMED   22323457
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 953)
  AUTHORS   Xie,T., Rowen,L., Aguado,B., Ahearn,M.E., Madan,A., Qin,S.,
            Campbell,R.D. and Hood,L.
  TITLE     Analysis of the gene-dense major histocompatibility complex class
            III region and its comparison to mouse
  JOURNAL   Genome Res 13 (12), 2621-2636 (2003)
   PUBMED   14656967
REFERENCE   6  (bases 1 to 953)
  AUTHORS   van Kooij,M., de Groot,K., van Vugt,H., Aten,J. and Snoek,M.
  TITLE     Genotype versus phenotype: conflicting results in mapping a lung
            tumor susceptibility locus to the G7c recombination interval in the
            mouse MHC class III region
  JOURNAL   Immunogenetics 53 (8), 656-661 (2001)
   PUBMED   11797099
REFERENCE   7  (bases 1 to 953)
  AUTHORS   Allcock,R.J., Martin,A.M. and Price,P.
  TITLE     The mouse as a model for the effects of MHC genes on human disease
  JOURNAL   Immunol Today 21 (7), 328-332 (2000)
   PUBMED   10871872
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC147772.1, AK019275.1 and BF465693.1.
            
            On Jul 31, 2009 this sequence version replaced NM_023893.3.
            
            Transcript Variant: This variant (1) represents the longer,
            protein-coding transcript.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC147772.1, AK019275.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-649               BC147772.1         1-649
            650-884             AK019275.1         551-785
            885-953             BF465693.1         1-69                c
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 18.56 cM"
     gene            1..953
                     /gene="Sapcd1"
                     /gene_synonym="2810436B06Rik; G7d; Ng23"
                     /note="suppressor APC domain containing 1"
                     /db_xref="GeneID:78376"
                     /db_xref="MGI:MGI:2388100"
     exon            1..220
                     /gene="Sapcd1"
                     /gene_synonym="2810436B06Rik; G7d; Ng23"
                     /inference="alignment:Splign:2.1.0"
     CDS             107..547
                     /gene="Sapcd1"
                     /gene_synonym="2810436B06Rik; G7d; Ng23"
                     /note="protein G7d"
                     /codon_start=1
                     /product="suppressor APC domain-containing protein 1"
                     /protein_id="NP_076382.3"
                     /db_xref="CCDS:CCDS37594.1"
                     /db_xref="GeneID:78376"
                     /db_xref="MGI:MGI:2388100"
                     /translation="MESPGPGGPPLVQAPYTVLLLPLGTSRQDPGAQNFFLWLQMMQA
                     LEREQDALWQGLELLEHGQAWFADRLRETQQRQLQLGALGEDFLMDLHSETDAPLLTR
                     IQKVNACLHSLIHKELSKHRKGVTQSTGEVVSQAPPGPKGPTLV"
     exon            221..361
                     /gene="Sapcd1"
                     /gene_synonym="2810436B06Rik; G7d; Ng23"
                     /inference="alignment:Splign:2.1.0"
     exon            362..454
                     /gene="Sapcd1"
                     /gene_synonym="2810436B06Rik; G7d; Ng23"
                     /inference="alignment:Splign:2.1.0"
     exon            455..953
                     /gene="Sapcd1"
                     /gene_synonym="2810436B06Rik; G7d; Ng23"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccttaagaa ttatcctggc ctcacaggct gaaagacaag gcaggatggg tagaagatgg
       61 gttggggagg gaccagcccc ggctccgccc ttcctacttt agagccatgg agagcccagg
      121 tcctggtggg ccacccctgg tgcaagcgcc ctacactgtt ctgctgctac cactggggac
      181 aagccgccaa gacccaggag cccagaactt cttcctctgg ctgcagatga tgcaggctct
      241 ggagagggaa caagatgctc tgtggcaggg cctggagctg ctggagcatg gccaggcctg
      301 gttcgcagac cggctgaggg agacccagca acggcagctg cagctggggg cccttggcga
      361 ggactttctg atggacttgc attcagagac tgatgcccct ctgctaaccc ggattcaaaa
      421 ggtgaatgct tgtctgcaca gtctgattca caaggagttg tcaaagcatc ggaaaggagt
      481 cacccagtcc acgggagagg tggtcagcca ggctccccca gggccaaagg ggcctaccct
      541 tgtgtagaca ggagaccctc ccctccctgc actggtgagt aaggggtggg gttggagtca
      601 gaatactcct gcccctcccc accccgattt catcttaact cagcagccag ggggctccag
      661 gctgagaaat tcagacagct tggtacaaag tgtccacagc tccttctcca tgccccttgc
      721 cctcgctctc cccttcatcg tgcacaacaa ccgtctttcc ccagtgtatc cggtgagaag
      781 gcgtgatcac tgagactcgc cttcagctga agcaaaacta agctaaagca gctgccctgg
      841 aacttagagt gaaaactgca ccatctggtg ccctgtgtgc tgctctgtgc cctgtgtcct
      901 gctctgcttc tggaataaac agcagcttcc ttattaaaaa aaaaaaaaaa aaa
//
