LOCUS       NM_001243017             984 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus spermatogenesis associated multipass transmembrane
            protein 1d (Samt1d), mRNA.
ACCESSION   NM_001243017 XM_136124
VERSION     NM_001243017.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX005465.14.
            
            On Jul 15, 2011 this sequence version replaced XM_136124.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.271853.1, AA061083.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-69                BX005465.14        114346-114414       c
            70-179              BX005465.14        113011-113120       c
            180-984             BX005465.14        103362-104166       c
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     gene            1..984
                     /gene="Samt1d"
                     /gene_synonym="Gm15140"
                     /note="spermatogenesis associated multipass transmembrane
                     protein 1d"
                     /db_xref="GeneID:625713"
                     /db_xref="MGI:MGI:3709336"
     exon            1..69
                     /gene="Samt1d"
                     /gene_synonym="Gm15140"
                     /inference="alignment:Splign:2.1.0"
     exon            70..179
                     /gene="Samt1d"
                     /gene_synonym="Gm15140"
                     /inference="alignment:Splign:2.1.0"
     CDS             151..864
                     /gene="Samt1d"
                     /gene_synonym="Gm15140"
                     /codon_start=1
                     /product="uncharacterized protein LOC625713"
                     /protein_id="NP_001229946.1"
                     /db_xref="CCDS:CCDS57782.1"
                     /db_xref="GeneID:625713"
                     /db_xref="MGI:MGI:3709336"
                     /translation="MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASI
                     LSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQ
                     NLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIW
                     NHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDL
                     KLKRPVKANDASKMGLLDA"
     exon            180..984
                     /gene="Samt1d"
                     /gene_synonym="Gm15140"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaaacttttt aatgtgagtc tctaacactg ggcagtcact aacagttgca cttcaatgaa
       61 aagataaagg tgattcacct ccttgggact ccatttctat tcaacatttc ctgtgaattc
      121 aaagatattt atgatcacag catctttcaa atggatcaac tcatcgttga tactcggagt
      181 gtcatctaca gatttatcaa tgagaaggac tgcatctaca agctgagcgg cctccttagc
      241 agcttagcag ctttcatgct tgaagtactt attgcaagca tcttatcctg gcgcctatgg
      301 gaatttgaca gcaatgttgt gcagttggtg tcctttggcc tgtttgaagc atattaccct
      361 cagcagttta acatctctgg aacactaacc aagatgctgg tatacacccc tattgattca
      421 acttggaaca tttcaactga atttatgtat gctcagaacc tggtagtatg ggccattttg
      481 atgaagcctg tggttctggt tttctgtgta atggccatta aaatcagctg cacgaagaac
      541 ccactagtgg agatgcagat atattgctac aagatctctg ccttaatttt gtctgttagc
      601 agcatgttca catttgtttc tgtgatctgg aaccacatgg tagattttta tggccacacc
      661 actcttgact ttccatctga ttttcctgtt aagaaagaag ctttaacaag caaacattta
      721 actgtggtgt taccagtagg cctccttata gccaccatgt cactctttgg tgtgatcatg
      781 tttctctctg agataagcga tttgaaacta aagcgtcctg tgaaggccaa tgatgcttcc
      841 aaaatgggcc ttctagatgc gtgaagtgat aagttttgga tttccaacat ttgtgagaat
      901 gttctttaag aagtttcctc ttcctacagg aaactcatgt agttctcaac tcattctaaa
      961 taaatttgtt ctataccaag catc
//
