LOCUS       NM_001243016             986 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus spermatogenesis associated multipass transmembrane
            protein 1c (Samt1c), mRNA.
ACCESSION   NM_001243016 XM_486801
VERSION     NM_001243016.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX005465.14 and BX322668.29.
            
            On Jul 16, 2011 this sequence version replaced XM_486801.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CJ047085.1, CJ046974.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-71                BX005465.14        48700-48770         c
            72-181              BX005465.14        47364-47473         c
            182-986             BX322668.29        166823-167627       c
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     gene            1..986
                     /gene="Samt1c"
                     /gene_synonym="Gm10057"
                     /note="spermatogenesis associated multipass transmembrane
                     protein 1c"
                     /db_xref="GeneID:625650"
                     /db_xref="MGI:MGI:3710528"
     exon            1..71
                     /gene="Samt1c"
                     /gene_synonym="Gm10057"
                     /inference="alignment:Splign:2.1.0"
     exon            72..181
                     /gene="Samt1c"
                     /gene_synonym="Gm10057"
                     /inference="alignment:Splign:2.1.0"
     CDS             153..866
                     /gene="Samt1c"
                     /gene_synonym="Gm10057"
                     /codon_start=1
                     /product="uncharacterized protein LOC625650"
                     /protein_id="NP_001229945.1"
                     /db_xref="CCDS:CCDS57781.1"
                     /db_xref="GeneID:625650"
                     /db_xref="MGI:MGI:3710528"
                     /translation="MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASI
                     LSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQ
                     NLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIW
                     NHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDL
                     KLKRPVKANDASKMGLLDA"
     exon            182..986
                     /gene="Samt1c"
                     /gene_synonym="Gm10057"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ataaaacttt ttaatgtgag tctctaacac tgggcagtca ctaacagttg cacttcaatg
       61 aaaagataaa ggtgattcac ctccttggga ctccatttct attcaacatt tcctgtgaat
      121 tcaaagatat ttatgatcac agcatctttc aaatggatca actcatcgtt gatactcgga
      181 gtgtcatcta cagatttatc aatgagaagg actgcatcta caagctgagt ggcctcctta
      241 gcagcttagc agctttcatg cttgaagtac ttattgcaag catcttatcc tggcgcctat
      301 gggaatttga cagcaatgtt gtgcagtttg tgtcctttgg cctgtttgaa gcatattacc
      361 ctcagcagtt taacatctct ggaacactaa ccaagatgct ggtatacacc cctattgatt
      421 caacttggaa catttcaact gaatttatgt atgctcagaa cctggtagta tgggccattt
      481 tgatgaagcc tgtggttctg gttttctgtg taatggccat taaaatcagc tgcacgaaga
      541 acccactagt ggagatgcag atatattgct acaagatctc tgccttaatt ttgtctgtta
      601 gcagcatgtt cacatttgtt tctgtgatct ggaaccacat ggtagatttt tatggccaca
      661 ccactcttga ctttccatct gattttcctg ttaagaaaga agctttaaca agcaaacatt
      721 taactgtggt gttaccagta ggcctcctta tagccaccat gtcactcttt ggtgtgatca
      781 tgtttctctc tgagataagc gatttgaaac taaagcgtcc tgtgaaggcc aatgatgctt
      841 ccaaaatggg ccttctagat gcgtgaagtg ataagttttg gatttccaac atttgtgaga
      901 atgttcttta agaagtttcc tcttcctaca ggaaactcat gtagttctca actcattcta
      961 aataaatttg ttctatacca agcatc
//
