LOCUS       NM_030036                984 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus spermatogenesis associated multipass transmembrane
            protein 1 (Samt1), mRNA.
ACCESSION   NM_030036 XM_910554 XM_989376
VERSION     NM_030036.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Yogo K, Tojima H, Ohno JY, Ogawa T, Nakamura N, Hirose S, Takeya T
            and Kohsaka T.
  TITLE     Identification of SAMT family proteins as substrates of MARCH11 in
            mouse spermatids
  JOURNAL   Histochem Cell Biol 137 (1), 53-65 (2012)
   PUBMED   22075566
  REMARK    GeneRIF: These results suggest that SAMT1 proteins are
            physiological substrates of MARCH11 and are delivered to lysosomes
            through the TGN-MVB pathway by a ubiquitin-dependent sorting system
            in mouse spermatids.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX322668.29.
            
            On or before Apr 17, 2010 this sequence version replaced
            XM_910554.2, XM_989376.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY714396.1, SRR5189685.14356.1
                                           [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-69                BX322668.29        135409-135477       c
            70-179              BX322668.29        134073-134182       c
            180-984             BX322668.29        124427-125231       c
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 72.38 cM"
     gene            1..984
                     /gene="Samt1"
                     /gene_synonym="Gm15144"
                     /note="spermatogenesis associated multipass transmembrane
                     protein 1"
                     /db_xref="GeneID:78092"
                     /db_xref="MGI:MGI:3709338"
     exon            1..69
                     /gene="Samt1"
                     /gene_synonym="Gm15144"
                     /inference="alignment:Splign:2.1.0"
     exon            70..179
                     /gene="Samt1"
                     /gene_synonym="Gm15144"
                     /inference="alignment:Splign:2.1.0"
     CDS             151..864
                     /gene="Samt1"
                     /gene_synonym="Gm15144"
                     /codon_start=1
                     /product="uncharacterized protein LOC78092"
                     /protein_id="NP_084312.1"
                     /db_xref="CCDS:CCDS53227.1"
                     /db_xref="GeneID:78092"
                     /db_xref="MGI:MGI:3709338"
                     /translation="MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASI
                     LSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQ
                     NLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIW
                     NHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDL
                     KLKRPVKANDASKMGLLDA"
     exon            180..984
                     /gene="Samt1"
                     /gene_synonym="Gm15144"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaaacttttt aatgtgagtc tctaacactg ggcagtcact aacagttgca cttcaatgaa
       61 aagataaagg tgattcacct ccttgggact ccatttctat tcaacatttc ctgtgaattc
      121 aaagatattt atgatcacag catctttcaa atggatcaac tcatcgttga tactcggagt
      181 gtcatctaca gatttatcaa tgagaaggac tgcatctaca agctgagcgg cctccttagc
      241 agcttagcag ctttcatgct tgaagtactt attgcaagca tcttatcctg gcgcctatgg
      301 gaatttgaca gcaatgttgt gcagtttgtg tcctttggcc tgtttgaagc atattaccct
      361 cagcagttta acatctctgg aacactaacc aagatgctgg tatacacccc tattgattca
      421 acttggaaca tttcaactga atttatgtat gctcagaacc tggtagtatg ggccattttg
      481 atgaagcctg tggttctggt tttctgtgta atggccatta aaatcagctg cacgaagaac
      541 ccactagtgg agatgcagat atattgctac aagatctctg ccttaatttt gtctgttagc
      601 agcatgttca catttgtttc tgtgatctgg aaccacatgg tagattttta tggccacacc
      661 actcttgact ttccatctga ttttcctgtt aagaaagaag ctttaacaag caaacattta
      721 actgtggtgt taccagtagg cctccttata gccaccatgt cactctttgg tgtgatcatg
      781 tttctctctg agataagcga tttgaaacta aagcgtcctg tgaaggccaa tgatgcttcc
      841 aaaatgggcc ttctagatgc gtgaagtgat aagttttgga tttccaacat ttgtgagaat
      901 gttctttaag aagtttcctc ttcctacagg aaactcatgt agttctcaac tcattctaaa
      961 taaatttgtt ctataccaag catc
//
