LOCUS       XM_036160559            2508 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus scaffold attachment factor B2 (Safb2),
            transcript variant X16, mRNA.
ACCESSION   XM_036160559
VERSION     XM_036160559.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..2508
                     /gene="Safb2"
                     /gene_synonym="mKIAA0138"
                     /note="scaffold attachment factor B2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 620 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 39 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:224902"
                     /db_xref="MGI:MGI:2146808"
     CDS             797..2353
                     /gene="Safb2"
                     /gene_synonym="mKIAA0138"
                     /codon_start=1
                     /product="scaffold attachment factor B2 isoform X6"
                     /protein_id="XP_036016452.1"
                     /db_xref="GeneID:224902"
                     /db_xref="MGI:MGI:2146808"
                     /translation="MKKVIGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTEL
                     HGRMISVEKAKNEPSEKKSSDRRACDQKEKVPGPDRPHPVKIKTEKTVIKKEEKLERK
                     EEKGPEDIKKEKDQDELTPGAAGHSRVTKSGSRGMERTVVMDKSKGEPVISVKATSRS
                     KDRSSKSQDRKSEGREKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQ
                     RLDAFQERREKARLQRERMQLQCQRQRLERERLERERLERERMRVERERRKEQQRIMR
                     EREELRRQQEQLRAEQERRALRRPYDLDARRDDGYWPEGKRAALEDRYRDFPRPDHRF
                     HDFDHRDRGHYQEHVIDRRDGSRTRVEERDGQYYPDDQHSHGRLLEHHAWDSGDGWHG
                     YSSDKKLNEGQGLPPPPRVSREWAEHSSQLEEQQVPVWHSAVDTNMTGHEHIRWRGAE
                     RGLAGGPGHGHVAAGRGGMAGQGSFAHGGHSQGYIVPSGRLEGGGMASQDQGGRVPNP
                     HPHPHFTRRY"
ORIGIN      
        1 aaagggaggc gggaggaagc gagtgcgttt tcctcttcgg cagcgccatt ttgtactacc
       61 tccgagccgc cacagctggt gccagcgagt ggagggggtt ccggagcgag ttgggaagtc
      121 gcggaagcga ggatggcgga acccgggacc gggtcgggcg accccgcctt tggtccgggc
      181 gcctcggaga gtgggacgcg gcggctcagc gacctgcggg tgatcgacct gagggcggag
      241 ctgaaaaagc ggaacctgga tacgggaggc aacaagagcg tgctgatgga gcggctgagg
      301 aaggcattta aggaggaagg acaagaacct gaggaggttg gaatcagctg gggagctgtg
      361 agcaagaggg ctgtaaagag aaacaccaaa ggatccaaga tggaggagga gggcagcgag
      421 gacaacggcc tggaggaaga ttccagatat gggcaggatg gggttgtgat tcttcagagt
      481 tcacaagaca gggacaccat ggatacaggt gtgccagatg ggatggaggc tgaggacctc
      541 agtgtgccct gcctggggaa ggccgacacc gtcaaccaga ttcttcatgc ttttgatgac
      601 agtaaagagt acgtggccgc gcagctggga cagcttccag ctcagctcct gaagcatgct
      661 gtaggtggat gaggaggtct tcaagaacac tctggaagct tccgtgtcag accttaaagt
      721 aactctggct gatgaagaag cccccatgga accagctctg ttaaggaaga acaagatata
      781 aagccagtca ttaaagatga aaaaggtcat cggagccaag gtggtcacca atgcccgcag
      841 tccaggggct cggtgctatg gatttgtgac aatgtccacg tcagatgagg ccaccaaatg
      901 cattagccac ctgcacagaa ctgaactaca tgggaggatg atctctgtgg agaaggccaa
      961 gaatgaaccc tctgagaaga agtcgtcaga caggagagca tgtgaccaaa aggagaaggt
     1021 gccagggccg gacaggcctc accctgtgaa gatcaagacg gagaaaactg tgatcaagaa
     1081 ggaagaaaaa ctggaaagaa aagaggagaa agggccagaa gacattaaaa aggagaagga
     1141 tcaagatgaa ctcacaccag gagctgctgg tcattctcga gtcaccaaat caggaagcag
     1201 aggcatggag cgtacagtcg tgatggacaa gtccaagggc gagcccgtca tcagtgtgaa
     1261 ggccacaagc aggtcaaagg acagaagctc caaaagtcaa gaccgaaagt cagagggcag
     1321 ggagaagaga gacatactgt cattcgacaa gatcaaggag cagcgggaga gggagcgcca
     1381 gaggcagagg gagcgtgaaa tccgggagac agagcgaaga cgggagcggg agcagcgaga
     1441 gcgggagcag cgtctggatg ccttccagga gcgacgggag aaggctcgct tgcagcggga
     1501 acggatgcag ctccagtgcc agcggcagcg gttggagcgg gagcggctgg agcgggagag
     1561 gctggagcgg gagcgcatga gagtggagcg tgaaaggcgc aaggaacagc agcgcattat
     1621 gcgtgagcgg gaggagctgc ggcggcagca agaacagctg cgtgctgagc aggaacggcg
     1681 ggcactgcgc agaccctacg acctggatgc taggagagac gatggctact ggccagaagg
     1741 gaagcgtgca gccttagagg acagataccg agactttcca cggccagatc accgcttcca
     1801 tgactttgat caccgagatc gtggccatta ccaggagcat gtcatagaca ggcgggatgg
     1861 gtccagaacc agagtggagg agcgggatgg gcagtactac ccagatgacc agcacagcca
     1921 tggaaggctc ctagagcacc atgcttggga ttccggagac ggctggcatg gctacagctc
     1981 tgacaagaag ttgaatgaag gccaagggct accccctccc cccagggtca gccgagagtg
     2041 ggcggagcac agctcacagt tggaggagca gcaggttcct gtctggcaca gtgctgtgga
     2101 cacaaacatg acgggccatg aacacatacg gtggcgaggt gctgagcggg gccttgcagg
     2161 aggacctggg catgggcatg tggcagcagg ccggggtggc atggctgggc aaggcagctt
     2221 tgcacacggt ggacattccc agggctatat tgtgcccagt ggtagactgg aaggtggtgg
     2281 catggccagc caggaccagg gtggccgagt tcctaacccc caccctcacc cccacttcac
     2341 ccgccgctac tgaactgctc tggaccaaac cctgctgctg caagtaggca gagactgcaa
     2401 ctccagccac ctcccacttg tggaaccctc acaggttctg ccaagtgtcg atgtgaactc
     2461 actctcctag tgtttttaat aaacacagtc ctgttctgct gtttgtaa
//
