LOCUS       NM_016740                504 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus S100 calcium binding protein A11 (S100a11), mRNA.
ACCESSION   NM_016740 XM_904302
VERSION     NM_016740.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Queen,R., Crosier,M., Eley,L., Kerwin,J., Turner,J.E., Yu,J.,
            Alqahtani,A., Dhanaseelan,T., Overman,L., Soetjoadi,H., Baldock,R.,
            Coxhead,J., Boczonadi,V., Laude,A., Cockell,S.J., Kane,M.A.,
            Lisgo,S. and Henderson,D.J.
  TITLE     Spatial transcriptomics reveals novel genes during the remodelling
            of the embryonic human arterial valves
  JOURNAL   PLoS Genet 19 (11), e1010777 (2023)
   PUBMED   38011284
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 504)
  AUTHORS   Saito,R., Satoh,H., Aoba,K., Hirasawa,H. and Miwa,N.
  TITLE     Dicalcin suppresses in vitro trophoblast attachment in human cell
            lines
  JOURNAL   Biochem Biophys Res Commun 570, 206-213 (2021)
   PUBMED   34311201
  REMARK    GeneRIF: Dicalcin suppresses in vitro trophoblast attachment in
            human cell lines.
REFERENCE   3  (bases 1 to 504)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 504)
  AUTHORS   Zhang,L., Zhang,Z., Li,C., Zhu,T., Gao,J., Zhou,H., Zheng,Y.,
            Chang,Q., Wang,M., Wu,J., Ran,L., Wu,Y., Miao,H., Zou,X. and
            Liang,B.
  TITLE     S100A11 Promotes Liver Steatosis via FOXO1-Mediated Autophagy and
            Lipogenesis
  JOURNAL   Cell Mol Gastroenterol Hepatol 11 (3), 697-724 (2021)
   PUBMED   33075563
  REMARK    GeneRIF: S100A11 Promotes Liver Steatosis via FOXO1-Mediated
            Autophagy and Lipogenesis.
REFERENCE   5  (bases 1 to 504)
  AUTHORS   Velecela,V., Torres-Cano,A., Garcia-Melero,A., Ramiro-Pareta,M.,
            Muller-Sanchez,C., Segarra-Mondejar,M., Chau,Y.Y.,
            Campos-Bonilla,B., Reina,M., Soriano,F.X., Hastie,N.D.,
            Martinez,F.O. and Martinez-Estrada,O.M.
  TITLE     Epicardial cell shape and maturation are regulated by Wt1 via
            transcriptional control of Bmp4
  JOURNAL   Development 146 (20) (2019)
   PUBMED   31624071
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 504)
  AUTHORS   Kraszucka,K., Burfeind,P., Nayernia,K., Kohler,M., Schmid,M.,
            Yaylaoglu,M. and Engel,W.
  TITLE     Developmental stage- and germ cell-regulated expression of a
            calcium-binding protein mRNA in mouse Sertoli cells
  JOURNAL   Mol Reprod Dev 54 (3), 232-243 (1999)
   PUBMED   10497345
REFERENCE   7  (bases 1 to 504)
  AUTHORS   Donato,R.
  TITLE     Functional roles of S100 proteins, calcium-binding proteins of the
            EF-hand type
  JOURNAL   Biochim Biophys Acta 1450 (3), 191-231 (1999)
   PUBMED   10395934
  REMARK    Review article
REFERENCE   8  (bases 1 to 504)
  AUTHORS   Ridinger,K., Ilg,E.C., Niggli,F.K., Heizmann,C.W. and Schafer,B.W.
  TITLE     Clustered organization of S100 genes in human and mouse
  JOURNAL   Biochim Biophys Acta 1448 (2), 254-263 (1998)
   PUBMED   9920416
REFERENCE   9  (bases 1 to 504)
  AUTHORS   Schonekess,B.O. and Walsh,M.P.
  TITLE     Molecular cloning and expression of avian smooth muscle S100A11
            (calgizzarin, S100C)
  JOURNAL   Biochem Cell Biol 75 (6), 771-775 (1997)
   PUBMED   9599666
REFERENCE   10 (bases 1 to 504)
  AUTHORS   Kao,J., Houck,K., Fan,Y., Haehnel,I., Libutti,S.K., Kayton,M.L.,
            Grikscheit,T., Chabot,J., Nowygrod,R., Greenberg,S. et al.
  TITLE     Characterization of a novel tumor-derived cytokine.
            Endothelial-monocyte activating polypeptide II
  JOURNAL   J Biol Chem 269 (40), 25106-25119 (1994)
   PUBMED   7929199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK164352.1 and AA207524.1.
            
            On Sep 2, 2006 this sequence version replaced NM_016740.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086903.1, CB320233.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-502               AK164352.1         2-503
            503-504             AA207524.1         268-269
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.51 cM"
     gene            1..504
                     /gene="S100a11"
                     /gene_synonym="cal; Emap1; EMAPI; S100a14; S100c"
                     /note="S100 calcium binding protein A11"
                     /db_xref="GeneID:20195"
                     /db_xref="MGI:MGI:1338798"
     exon            1..58
                     /gene="S100a11"
                     /gene_synonym="cal; Emap1; EMAPI; S100a14; S100c"
                     /inference="alignment:Splign:2.1.0"
     exon            59..207
                     /gene="S100a11"
                     /gene_synonym="cal; Emap1; EMAPI; S100a14; S100c"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..363
                     /gene="S100a11"
                     /gene_synonym="cal; Emap1; EMAPI; S100a14; S100c"
                     /note="calizzarin; EMAP; protein S100-C; endothelial
                     monocyte-activating polypeptide; endothelial monocyte
                     activating polypeptide 1; calgizzarin; S100 calcium
                     binding protein A14"
                     /codon_start=1
                     /product="protein S100-A11"
                     /protein_id="NP_058020.1"
                     /db_xref="CCDS:CCDS38525.1"
                     /db_xref="GeneID:20195"
                     /db_xref="MGI:MGI:1338798"
                     /translation="MPTETERCIESLIAVFQKYSGKDGNNTQLSKTEFLSFMNTELAA
                     FTKNQKDPGVLDRMMKKLDLNCDGQLDFQEFLNLIGGLAIACHDSFIQTSQKRI"
     exon            208..504
                     /gene="S100a11"
                     /gene_synonym="cal; Emap1; EMAPI; S100a14; S100c"
                     /inference="alignment:Splign:2.1.0"
     regulatory      474..479
                     /regulatory_class="polyA_signal_sequence"
                     /gene="S100a11"
                     /gene_synonym="cal; Emap1; EMAPI; S100a14; S100c"
                     /note="hexamer: AATAAA"
     polyA_site      504
                     /gene="S100a11"
                     /gene_synonym="cal; Emap1; EMAPI; S100a14; S100c"
                     /note="major polyA site"
ORIGIN      
        1 cactcctgtc ccagccaccg tcagccacag tcgcagccgg acctcgctcc tcaacttgaa
       61 gcaaaaatgc ctacagagac tgagagatgc attgagtccc tgattgctgt tttccaaaag
      121 tacagcggga aggatggaaa caacactcaa ctctccaaaa ctgaattcct ttccttcatg
      181 aacacagagc tggctgcctt cacaaagaac cagaaggatc ctggtgtcct tgaccgcatg
      241 atgaagaagc tggacctcaa ctgtgacggg cagctagatt tccaagagtt tctcaacctc
      301 attggtggct tagctatagc gtgccatgat tctttcatcc aaacttccca gaagcgaatc
      361 taatcctctt agttcccatc caaccaccaa gtcatcacct cccccgaccc catccacacc
      421 tgcactgagc ccagcacacc taccacaaca tgtatcccac gcctgctggc aaaaataaaa
      481 caatgccatt tttttttaaa tgta
//
