LOCUS       NM_009112                650 bp    mRNA    linear   ROD 18-MAR-2025
DEFINITION  Mus musculus S100 calcium binding protein A10 (calpactin)
            (S100a10), mRNA.
ACCESSION   NM_009112 XM_003689348 XM_006543794
VERSION     NM_009112.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Nakamura,Y., Ito,M.A., Hoshino,Y., Matsuoka,I., Okada,T., Okada,Y.
            and Nakanishi,T.
  TITLE     Modulation of prostaglandin transport activity of SLCO2A1 by
            annexin A2 and S100A10
  JOURNAL   Am J Physiol Cell Physiol 326 (4), C1042-C1053 (2024)
   PUBMED   38372137
  REMARK    GeneRIF: Modulation of prostaglandin transport activity of SLCO2A1
            by annexin A2 and S100A10.
REFERENCE   2  (bases 1 to 650)
  AUTHORS   Liu,H., Sun,J., Wang,Z., Han,R., Zhao,Y., Lou,Y. and Wang,H.
  TITLE     S100a10 deficiency in neutrophils aggravates ulcerative colitis in
            mice
  JOURNAL   Int Immunopharmacol 128, 111499 (2024)
   PUBMED   38232535
  REMARK    GeneRIF: S100a10 deficiency in neutrophils aggravates ulcerative
            colitis in mice.
REFERENCE   3  (bases 1 to 650)
  AUTHORS   Galazo,M.J., Sweetser,D.A. and Macklis,J.D.
  TITLE     Tle4 controls both developmental acquisition and early post-natal
            maturation of corticothalamic projection neuron identity
  JOURNAL   Cell Rep 42 (8), 112957 (2023)
   PUBMED   37561632
REFERENCE   4  (bases 1 to 650)
  AUTHORS   Ahuja,N., Hiltabidle,M.S., Rajasekhar,H., Voss,S., Lu,S.Z.,
            Barlow,H.R., Cowdin,M.A., Daniel,E., Vaddaraju,V., Anandakumar,T.,
            Black,E., Cleaver,O. and Maynard,C.
  TITLE     Endothelial Cyp26b1 restrains murine heart valve growth during
            development
  JOURNAL   Dev Biol 486, 81-95 (2022)
   PUBMED   35364055
REFERENCE   5  (bases 1 to 650)
  AUTHORS   Seo,M.K., Lee,J.G. and Park,S.W.
  TITLE     Early life stress induces age-dependent epigenetic changes in p11
            gene expression in male mice
  JOURNAL   Sci Rep 11 (1), 10663 (2021)
   PUBMED   34471143
  REMARK    GeneRIF: Early life stress induces age-dependent epigenetic changes
            in p11 gene expression in male mice.
            Publication Status: Online-Only
REFERENCE   6  (bases 1 to 650)
  AUTHORS   Ueda,S., Gu,X.F., Whitaker-Azmitia,P.M., Naruse,I. and Azmitia,E.C.
  TITLE     Neuro-glial neurotrophic interaction in the S-100 beta retarded
            mutant mouse (Polydactyly Nagoya). I. Immunocytochemical and
            neurochemical studies
  JOURNAL   Brain Res 633 (1-2), 275-283 (1994)
   PUBMED   7511035
REFERENCE   7  (bases 1 to 650)
  AUTHORS   Dorin,J.R., Emslie,E. and van Heyningen,V.
  TITLE     Related calcium-binding proteins map to the same subregion of
            chromosome 1q and to an extended region of synteny on mouse
            chromosome 3
  JOURNAL   Genomics 8 (3), 420-426 (1990)
   PUBMED   2149559
REFERENCE   8  (bases 1 to 650)
  AUTHORS   Bernier,L., Colman,D.R. and D'Eustachio,P.
  TITLE     Chromosomal locations of genes encoding 2',3' cyclic nucleotide
            3'-phosphodiesterase and glial fibrillary acidic protein in the
            mouse
  JOURNAL   J Neurosci Res 20 (4), 497-504 (1988)
   PUBMED   2903254
REFERENCE   9  (bases 1 to 650)
  AUTHORS   Osborn,M., Johnsson,N., Wehland,J. and Weber,K.
  TITLE     The submembranous location of p11 and its interaction with the p36
            substrate of pp60 src kinase in situ
  JOURNAL   Exp Cell Res 175 (1), 81-96 (1988)
   PUBMED   3126079
REFERENCE   10 (bases 1 to 650)
  AUTHORS   Saris,C.J., Kristensen,T., D'Eustachio,P., Hicks,L.J., Noonan,D.J.,
            Hunter,T. and Tack,B.F.
  TITLE     cDNA sequence and tissue distribution of the mRNA for bovine and
            murine p11, the S100-related light chain of the protein-tyrosine
            kinase substrate p36 (calpactin I)
  JOURNAL   J Biol Chem 262 (22), 10663-10671 (1987)
   PUBMED   3038891
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU559648.1, AK161647.1 and D18288.1.
            
            On or before Jan 5, 2014 this sequence version replaced
            XM_006543794.1, XM_003689348.1, NM_009112.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB841906.2, CB595147.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-17                BU559648.1         4-20
            18-640              AK161647.1         2-624
            641-650             D18288.1           116-125
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.51 cM"
     gene            1..650
                     /gene="S100a10"
                     /gene_synonym="42C; CAL12; Cal1l; CLP11; p10; p11"
                     /note="S100 calcium binding protein A10 (calpactin)"
                     /db_xref="GeneID:20194"
                     /db_xref="MGI:MGI:1339468"
     exon            1..95
                     /gene="S100a10"
                     /gene_synonym="42C; CAL12; Cal1l; CLP11; p10; p11"
                     /inference="alignment:Splign:2.1.0"
     exon            96..247
                     /gene="S100a10"
                     /gene_synonym="42C; CAL12; Cal1l; CLP11; p10; p11"
                     /inference="alignment:Splign:2.1.0"
     CDS             116..409
                     /gene="S100a10"
                     /gene_synonym="42C; CAL12; Cal1l; CLP11; p10; p11"
                     /note="calcium binding protein A11 (calgizzarin); S100
                     calcium binding protein A10 (calgizzarin); calpactin I
                     light chain; calpactin-1 light chain; cellular ligand of
                     annexin II; S100 calcium-binding protein A10"
                     /codon_start=1
                     /product="protein S100-A10"
                     /protein_id="NP_033138.1"
                     /db_xref="CCDS:CCDS38526.1"
                     /db_xref="GeneID:20194"
                     /db_xref="MGI:MGI:1339468"
                     /translation="MPSQMEHAMETMMLTFHRFAGDKDHLTKEDLRVLMEREFPGFLE
                     NQKDPLAVDKIMKDLDQCRDGKVGFQSFLSLVAGLTIACNDYFVVNMKQKGKK"
     exon            248..650
                     /gene="S100a10"
                     /gene_synonym="42C; CAL12; Cal1l; CLP11; p10; p11"
                     /inference="alignment:Splign:2.1.0"
     regulatory      624..629
                     /regulatory_class="polyA_signal_sequence"
                     /gene="S100a10"
                     /gene_synonym="42C; CAL12; Cal1l; CLP11; p10; p11"
                     /note="hexamer: AAGAAA"
     polyA_site      650
                     /gene="S100a10"
                     /gene_synonym="42C; CAL12; Cal1l; CLP11; p10; p11"
                     /note="major polyA site"
ORIGIN      
        1 gtacccgcct cgcgtacaaa gacgcgcggt cttcggcact agcctcatcg tggtgtgccc
       61 agctcttcca aggactgctg cgcttcgggg cccaggtttc gacagactct tcaaaatgcc
      121 atcccaaatg gagcacgcca tggaaaccat gatgcttacg tttcacaggt ttgcaggcga
      181 caaagaccac ttgacaaagg aggacctgag agtgctcatg gaacgggagt tccctgggtt
      241 tttggaaaat caaaaggacc ctctggctgt ggacaaaata atgaaggacc tggaccagtg
      301 ccgagatggc aaagtgggct tccagagctt tctatcacta gtggcagggc tcaccattgc
      361 atgcaatgac tattttgtag taaacatgaa gcagaagggg aagaagtagg ccaactggag
      421 cactggtacc cccaccctgg tgcgtgttca cccacggggt cacttgagga atctgcccca
      481 ctgcttcttg tgagcagatc aggaccctta ggaaatgtgc aaatgagatc caactccaat
      541 tcaacaatct gagagagaaa acttaatcca atggcagaga agcttctgag ttttatattg
      601 tttgcatccc attgccctca ataaagaaag tccttttttt aagttctgaa
//
