LOCUS       NM_001008230            2428 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus receptor transporter protein 2 (Rtp2), mRNA.
ACCESSION   NM_001008230 XM_155900
VERSION     NM_001008230.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Orecchioni,M., Kobiyama,K., Winkels,H., Ghosheh,Y., McArdle,S.,
            Mikulski,Z., Kiosses,W.B., Fan,Z., Wen,L., Jung,Y., Roy,P.,
            Ali,A.J., Miyamoto,Y., Mangan,M., Makings,J., Wang,Z., Denn,A.,
            Vallejo,J., Owens,M., Durant,C.P., Braumann,S., Mader,N., Li,L.,
            Matsunami,H., Eckmann,L., Latz,E., Wang,Z., Hazen,S.L. and Ley,K.
  TITLE     Olfactory receptor 2 in vascular macrophages drives atherosclerosis
            by NLRP3-dependent IL-1 production
  JOURNAL   Science 375 (6577), 214-221 (2022)
   PUBMED   35025664
REFERENCE   2  (bases 1 to 2428)
  AUTHORS   Sharma,R., Ishimaru,Y., Davison,I., Ikegami,K., Chien,M.S., You,H.,
            Chi,Q., Kubota,M., Yohda,M., Ehlers,M. and Matsunami,H.
  TITLE     Olfactory receptor accessory proteins play crucial roles in
            receptor function and gene choice
  JOURNAL   Elife 6, e21895 (2017)
   PUBMED   28262096
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2428)
  AUTHORS   Saito,H., Kubota,M., Roberts,R.W., Chi,Q. and Matsunami,H.
  TITLE     RTP family members induce functional expression of mammalian
            odorant receptors
  JOURNAL   Cell 119 (5), 679-691 (2004)
   PUBMED   15550249
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC127241.3.
            
            On Nov 17, 2006 this sequence version replaced NM_001008230.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049158.1, BQ939978.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-260               AC127241.3         13652-13911
            261-2428            AC127241.3         16731-18898
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 15.12 cM"
     gene            1..2428
                     /gene="Rtp2"
                     /gene_synonym="Gm605"
                     /note="receptor transporter protein 2"
                     /db_xref="GeneID:224055"
                     /db_xref="MGI:MGI:2685451"
     exon            1..260
                     /gene="Rtp2"
                     /gene_synonym="Gm605"
                     /inference="alignment:Splign:2.1.0"
     CDS             97..768
                     /gene="Rtp2"
                     /gene_synonym="Gm605"
                     /codon_start=1
                     /product="receptor-transporting protein 2"
                     /protein_id="NP_001008231.1"
                     /db_xref="CCDS:CCDS28081.1"
                     /db_xref="GeneID:224055"
                     /db_xref="MGI:MGI:2685451"
                     /translation="MSTSLTTCEWKKVFYEKMEVAKPADSWELIIDPTLKPNELGPGW
                     KQYLEQHASGRFHCSWCWHTWQSANVVILFHMHLDRAQRVGSVRMRVFKQLCYQCGTS
                     RLDESSMLEENIEGLVDNLITSLREQCYDEDGGQYRIHVASRPDSGLHRSEFCEACQE
                     GIVHWKPSEKLLEEDAAYTDASKKKGQAGFISSFFSFRWCLFWGTLCLVIVYLQFFRG
                     RSGFL"
     exon            261..2428
                     /gene="Rtp2"
                     /gene_synonym="Gm605"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2407..2412
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rtp2"
                     /gene_synonym="Gm605"
                     /note="hexamer: AATAAA"
     polyA_site      2428
                     /gene="Rtp2"
                     /gene_synonym="Gm605"
                     /note="major polyA site"
ORIGIN      
        1 gctttttgga ccacagagac tgcctgggct gcatctatct aagctttctg ttcttccttg
       61 ggctgagttc acccttctat cccagccaac aggaccatgt ccaccagcct gaccacttgt
      121 gagtggaaga aggtcttcta cgagaagatg gaggtggcca agccagcgga cagctgggag
      181 ctcatcatag accccaccct caagcccaat gagctgggcc ctggctggaa gcagtacctg
      241 gagcaacatg cctcaggcag gttccactgt tcctggtgtt ggcacacatg gcaatctgcc
      301 aatgtcgtca ttctcttcca catgcacctg gaccgtgccc agcgtgttgg ctcagtgcgc
      361 atgcgcgtgt tcaagcagct gtgctatcag tgcggcacgt cgcggctgga cgagtccagc
      421 atgctggagg agaatatcga gggcctggtg gacaacctca tcaccagtct gcgcgagcag
      481 tgttacgatg aggatggtgg ccagtaccgc atccacgtag ccagccggcc agacagcgga
      541 ttgcaccgca gtgagttctg cgaggcctgc caggaaggca tcgtgcactg gaagcccagc
      601 gaaaagctgc tggaggagga tgccgcctat accgatgcct ccaagaagaa gggccaggct
      661 ggttttatct ccagcttctt ctcatttcgt tggtgcctgt tctggggcac cctctgcctg
      721 gtcattgtct acctgcagtt cttccgaggc cgctctggct tcctttagtg gtaggggtgg
      781 ggaaaaggga ctcatgggat tgaaaatgag aaggatttgg tctcctcctg agtctgctac
      841 gggttctatc tatgactctg gttatctgca cactgctctc tagtctgcac taggagaaac
      901 ttagtggtcc ttccactaat ttaatagcaa cggagggaaa gtagaaggaa tagggatttg
      961 gaagtttgct ggagtttagt gagtctgaaa tctgcagctg ccacctccag cctttacttt
     1021 acatttctag ccttaggtcc catctggaca ctgtcgcttt cagctttatg tgccctgcat
     1081 ggttcccctt ggagggagca gagccacctc cagcctccat cgaatacata gggacagcct
     1141 gcttcttcca ttctgaaatg ctgaggattt cactcaggcg ctagggctgg gatgaggata
     1201 gaggtggggg gtggtggaag tggggatggg ctgagggggt tggaatggtc aagggcgcat
     1261 tgtccaatgg attagctatt ggccatatgt ggctgctctg attaagatta attaagatga
     1321 aataaaagtg ttccttagta gttccaaact cagtcaggct tatacagaat ttgtccccat
     1381 agaggccatt gctcaatgga agacaagggt gacttctagg aagatgaaca ccaagggttt
     1441 gggcatcaag tgctccccag aggtcttcca ccctctgctt tgtctaccct gggaacccct
     1501 acgcagcgct gaacaacagg acaggaaaaa ctaggcgcca gcttgcatct cttgctaaaa
     1561 tctgttttgt gtctagaaat agtttgccaa aactctgtca agaaaatagg tcatgtctca
     1621 gagggtcagt aaagccaggg tgtctgacca ccgcatccga aggaggaaat gcggctgagg
     1681 atggctgtga gggcaaggaa gctagaatag ttggagagaa acgaggccgg gaatatctcc
     1741 agaagcccag tttcctcgat aaacagtgat ttctgcattt tcatgttaaa ttggagtgac
     1801 tggtccctga ctcggggtcc cttcccaacc cgctgcaatg attttatctc ctcaggattg
     1861 agggagtagg ttatattagt ttccaagact tgtttcctct ttagtccatg gaaatctcat
     1921 ttctacatcc ctagagccag ccttccatac ttcactacca aaacattggc tgcttttctg
     1981 tttgtgtctg ccacatttta tagtcctctt tctgtaattg ttctgttcat tgaaaacgtg
     2041 gctgtcactc taatattttc cttacatgta ttctggtcat attcaaagat atatcacctc
     2101 ttctgacccc cccagcaact ggttctctct tctctgaatg atccctttcc tgcttttgta
     2161 tctatgttta aaagtctcct ttttacacgt gagggaacac aaatgatatt tttctctttt
     2221 agcctaactg atttagctta acatgatctc cagtcccacc cacttcccag aaagtgacat
     2281 ttttattttt ctttataacc aaatatattc cattttgtac acatgacata ctttttcatc
     2341 cattgatcaa tctgttaatg ggtatatcat ctgatttcat aacttggcta ttgtaaatag
     2401 tgtcataata aatgcagata tgtaggta
//
