LOCUS       NM_001018063            1273 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus retrotransposon Gag like 8B (Rtl8b), mRNA.
ACCESSION   NM_001018063 XM_907228
VERSION     NM_001018063.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Mohan HM, Trzeciakiewicz H, Pithadia A, Crowley EV, Pacitto R,
            Safren N, Trotter B, Zhang C, Zhou X, Zhang Y, Basrur V, Paulson HL
            and Sharkey LM.
  TITLE     RTL8 promotes nuclear localization of UBQLN2 to subnuclear
            compartments associated with protein quality control
  JOURNAL   Cell Mol Life Sci 79 (3), 176 (2022)
   PUBMED   35247097
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  AUTHORS   Brandt J, Schrauth S, Veith AM, Froschauer A, Haneke T, Schultheis
            C, Gessler M, Leimeister C and Volff JN.
  TITLE     Transposable elements as a source of genetic innovation: expression
            and evolution of a family of retrotransposon-derived neogenes in
            mammals
  JOURNAL   Gene 345 (1), 101-111 (2005)
   PUBMED   15716091
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY248612.1, AK003646.1 and AI182586.1.
            
            On Jan 18, 2019 this sequence version replaced NM_001018063.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC029838.1, AK003646.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-51                BY248612.1         4-54
            52-1270             AK003646.1         2-1220
            1271-1273           AI182586.1         19-21               c
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 29.91 cM"
     gene            1..1273
                     /gene="Rtl8b"
                     /gene_synonym="Cxx1b; Mart8c"
                     /note="retrotransposon Gag like 8B"
                     /db_xref="GeneID:553127"
                     /db_xref="MGI:MGI:3576504"
     exon            1..1273
                     /gene="Rtl8b"
                     /gene_synonym="Cxx1b; Mart8c"
                     /inference="alignment:Splign:2.1.0"
     CDS             140..481
                     /gene="Rtl8b"
                     /gene_synonym="Cxx1b; Mart8c"
                     /note="mammalian retrotransposon derived 8c; CAAX box 1
                     homolog B; CAAX box 1B"
                     /codon_start=1
                     /product="retrotransposon Gag like 8B"
                     /protein_id="NP_001018073.1"
                     /db_xref="CCDS:CCDS30135.1"
                     /db_xref="GeneID:553127"
                     /db_xref="MGI:MGI:3576504"
                     /translation="MEGQGKVKRPKAYMLRHNRRRRRRNPIPFPELFDGEMDKLPEFI
                     VQTGSYMLVDDRTFDTDELKVTFLITRLKGRALQWVIPYIKIDSPLLNDYNGFLNEMK
                     RVFGWEEDEDF"
ORIGIN      
        1 acttccggcg acgccttgta attgacaatc tctgtgctct gcggatccag caaagcacag
       61 ctgaccccat caagagtccg gagagcctcc agccagcccg gccaccaagc gactagatca
      121 gcccagagag cgcagcgtca tggaaggcca aggcaaggta aagaggccga aggcctacat
      181 gctcaggcac aacaggcggc gccgtcggcg gaaccccatc ccgtttccag agctgtttga
      241 tggcgagatg gacaagctcc cggagttcat cgtgcagacc ggctcctaca tgttggtgga
      301 cgacaggacc ttcgacaccg acgagctcaa ggtgacgttc ctcatcaccc gcctcaaggg
      361 ccgggccctg cagtgggtga tcccctacat caagatcgac agccccctgc tcaatgatta
      421 caacggcttc ctgaatgaga tgaagcgggt gttcgggtgg gaggaggatg aggacttcta
      481 ggcctctggc aagcctggcc tggggttggg gctccgggag ggtgggctgc tgctgtgttg
      541 tcctgtggct gcagccgggg tcgccgagtg cgccctcccc ccgggccccc ctcctacccc
      601 gagaactccc ccacctcccg cgcccgccct gcctggagat ctcgcatgcg cgcgcccctg
      661 tctcctcctg tgtcctagcc tttgttccag gaatagctcc ccaggcccct gctgctgtcc
      721 ctgctgggcc tggctctgga gagcacaagg cctcccactg ttgacagctc agcccatccc
      781 tggcaggttt ggacactgtc ccaggctcca gctgcaagat gggctcctgt cacctaatgg
      841 acagatcaac tgccacctga tggacatgtc atgctgtcca ctgctttcta tctggtggac
      901 agactgcaag cttctgccca taaggcctgt gctgacgctg ccatttcaag cccctgcaca
      961 acccatctgt ggactggctg ctgcccttaa atgatctgga ctcacctggg aggtacctgg
     1021 gctgcccaag gcccatggac attgattcac cttcagcggg acccttcccc tccctgctcc
     1081 cagaaacctg ctgtctccca ttttgtcttg tggactagct ggttttcctg agaaaccagc
     1141 ttgcagctct ttctctgatg tgtatgcctt ttccaacaca gtagcccctg tgctctttcc
     1201 ttcttgtctg ttctacctgt acagaagcct tttcctcacg ttgaataaac atcagatgct
     1261 atttaaaagg aaa
//
