LOCUS       NM_001005525            2192 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus arginine/serine-rich coiled-coil 2 (Rsrc2), transcript
            variant 1, mRNA.
ACCESSION   NM_001005525
VERSION     NM_001005525.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Jerome-Majewska,L.A., Achkar,T., Luo,L., Lupu,F. and Lacy,E.
  TITLE     The trafficking protein Tmed2/p24beta(1) is required for
            morphogenesis of the mouse embryo and placenta
  JOURNAL   Dev Biol 341 (1), 154-166 (2010)
   PUBMED   20178780
REFERENCE   3  (bases 1 to 2192)
  AUTHORS   Tamplin,O.J., Kinzel,D., Cox,B.J., Bell,C.E., Rossant,J. and
            Lickert,H.
  TITLE     Microarray analysis of Foxa2 mutant mouse embryos reveals novel
            gene expression and inductive roles for the gastrula organizer and
            its derivatives
  JOURNAL   BMC Genomics 9, 511 (2008)
   PUBMED   18973680
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2192)
  AUTHORS   Nishimura,M., Yokoi,N., Miki,T., Horikawa,Y., Yoshioka,H.,
            Takeda,J., Ohara,O. and Seino,S.
  TITLE     Construction of a multi-functional cDNA library specific for mouse
            pancreatic islets and its application to microarray
  JOURNAL   DNA Res 11 (5), 315-323 (2004)
   PUBMED   15747579
REFERENCE   5  (bases 1 to 2192)
  AUTHORS   VanBuren,V., Piao,Y., Dudekula,D.B., Qian,Y., Carter,M.G.,
            Martin,P.R., Stagg,C.A., Bassey,U.C., Aiba,K., Hamatani,T.,
            Kargul,G.J., Luo,A.G., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Assembly, verification, and initial annotation of the NIA mouse
            7.4K cDNA clone set
  JOURNAL   Genome Res 12 (12), 1999-2003 (2002)
   PUBMED   12466305
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC129582.10, BC132550.1, AW557796.2 and BP772863.1.
            
            On Mar 6, 2013 this sequence version replaced NM_001005525.1.
            
            Transcript Variant: This variant (1) encodes the longest isoform
            (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            CCDS Note: This CCDS representation has an inferred exon
            combination due to the lack of full-length transcript support for
            this gene in mouse. This representation is mostly supported by
            mouse BC008229.1, which lacks the last three exons that are
            inferred from other partial mouse transcripts, and by full-length
            orthologous transcripts, e.g., human AB212664.1 or BC067773.1, or
            cow BT030691.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.336587.1,
                                           SRR11927938.3623406.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-126               AC129582.10        129995-130120
            127-283             AC129582.10        134298-134454
            284-324             AC129582.10        135731-135771
            325-515             AC129582.10        138547-138737
            516-719             AC129582.10        139714-139917
            720-842             AC129582.10        142728-142850
            843-867             AC129582.10        145774-145798
            868-1518            BC132550.1         652-1302
            1519-1622           AW557796.2         553-656             c
            1623-2192           BP772863.1         28-597              c
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 63.15 cM"
     gene            1..2192
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /note="arginine/serine-rich coiled-coil 2"
                     /db_xref="GeneID:208606"
                     /db_xref="MGI:MGI:1913489"
     exon            1..126
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            127..283
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            284..324
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            325..515
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            516..719
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            720..842
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            843..922
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            923..1155
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1156..1245
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1246..2176
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1861..1866
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1882
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /note="major polyA site"
     regulatory      2157..2162
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2176
                     /gene="Rsrc2"
                     /gene_synonym="1500011J06Rik"
ORIGIN      
        1 ttgtgccatc cgggtctctc gcgcaagaga ttcagtctgt ggcgaagctt cgaggcggcc
       61 agtactgttg agtgcgggca agcagaggcg ccgccttagc ggccgggact caaaaaaata
      121 atggcggcta ttgatacaga acgagatgga ttagccctag aaaagacatc accggataga
      181 gaaaagaaaa aagagcagtc agatatatct atttctccta gagcctcaaa acatcattat
      241 tcaaggtcga ggtcaaggtc aagagaaaga aaacgaaaat cagatgatgg aaggaagcac
      301 aggagccgga gcagaagcaa agagggaaga agacatgagt ccaaagataa gtcctctaag
      361 agacacaagt ctgaggagca caatgacaaa gaacattctt ctgacaaagg aagagagcga
      421 ttaaattcat ctgagaatgg tgaggacaga cataaacgca aagaaaggaa gtcatcacgg
      481 ggcagaagtc actcaaggtc tagatcgcgt gaaaggcgcc atcgcagtag aagcagggaa
      541 aggaagaagt ctcgatcgag gagtagggat cggaaaaagt ctcgatccag aagcagagac
      601 aggaagaagt caagatctag aagcagggat aggaaacgaa ggatcagaac tcgttcccga
      661 tccagatcca gacacaggca taggactaga agcaggagca gatcaaggag tcgaagtcga
      721 gatagaaaga agagaattga aaaaccaaga agatttagca gaagcctaag ccggacacct
      781 agtccacctc ccttcagagg cagaaacaca gcaatggacg ctcaagaagc actagctagg
      841 agattagaaa gggcaaagaa attacaagaa caacgagaaa aggaaatggt tgaaaagcag
      901 aaacaacaag aaatggctgc agcagctgca gccactggag gttcagttct taatgttgct
      961 gcactgttgg catcaggaac gcaggttact cctcagatag ctatggcagc tcaaatggca
     1021 gccctgcaag ctaaagcctt ggcagagact ggcatagcag tgcccagcta ctacaaccca
     1081 gcagctgtga atccaatgaa gtttgctgag caagagaaaa agaggaaaat gctctggcaa
     1141 ggcaagaaag aaggcgacaa atctcagtct gctgaaatct gggaaaaatt aaattttgga
     1201 aacaaggacc aaaatgtcaa atttagaaag ttaatgggca ttaagagtga agatgaagct
     1261 ggctgtagct ccgttgatga agaaagttat aagactttaa agcaacaaga agaagttttt
     1321 cgcaatcttg atgctcagta tgaaatggca agatcacaaa cccacacaca aagaggaatg
     1381 ggtttgggtt tcacatcttc aatgcgtgga atggatacag tttgaaaaaa tatcaatttg
     1441 ggactttata gacttgttct gatgttgggt ccttgttcac cacacagcta gtattctagc
     1501 ttgcatgggt gttgcattga ctttaattta ttgaaaaata cgattttttt gtaaatatca
     1561 gatcagtgat actggtgtta gtgttgtaat caggttcaac ccacttccat taaacttgac
     1621 aggactatag aaggacaata ttttttagtt catgaattct acttttcaaa tatattaaag
     1681 cttcgggtgg gataaaatct catgcataga tttttctcgt gtccgctgtc ttgtgtactt
     1741 ttgtacttaa ccttgtacag ttattttcat ctcttgaaac atgaaagaaa tgttatgtag
     1801 atgttcttta gaagatctgg ccatttggta cataatcctg cacacaagct gggcagtgat
     1861 aataaaaatg gttttctcaa aactggtgtt aatttaagtt acctgctgtt tggtttggga
     1921 ggttgtttgt ttgtttttat aattaaaaaa ctggttataa atgccttttt atagcctcta
     1981 ttataaggtg tagacaatat agacaatacc acagcgagct gtaaagggag ggtgagtgga
     2041 gcatattaaa atagtactgt ttctactgta aggcacaatt ggtgtgcagt atttgttaat
     2101 ccatgttaat caggaaatag actaaagtat taaagggatg tgagcacttt tactctaata
     2161 aagtgcctta taacaaaaaa aaaaaaaaaa aa
//
