LOCUS       NM_025822               3242 bp    mRNA    linear   ROD 08-FEB-2024
DEFINITION  Mus musculus arginine/serine-rich coiled-coil 1 (Rsrc1), transcript
            variant 2, mRNA.
ACCESSION   NM_025822
VERSION     NM_025822.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3242)
  AUTHORS   Zhang,S., Wang,C., Wang,Y., Zhang,H., Xu,C., Cheng,Y., Yuan,Y.,
            Sha,J., Guo,X. and Cui,Y.
  TITLE     A novel protein encoded by circRsrc1 regulates mitochondrial
            ribosome assembly and translation during spermatogenesis
  JOURNAL   BMC Biol 21 (1), 94 (2023)
   PUBMED   37095490
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3242)
  AUTHORS   Osterwalder,M., Barozzi,I., Tissieres,V., Fukuda-Yuzawa,Y.,
            Mannion,B.J., Afzal,S.Y., Lee,E.A., Zhu,Y., Plajzer-Frick,I.,
            Pickle,C.S., Kato,M., Garvin,T.H., Pham,Q.T., Harrington,A.N.,
            Akiyama,J.A., Afzal,V., Lopez-Rios,J., Dickel,D.E., Visel,A. and
            Pennacchio,L.A.
  TITLE     Enhancer redundancy provides phenotypic robustness in mammalian
            development
  JOURNAL   Nature 554 (7691), 239-243 (2018)
   PUBMED   29420474
REFERENCE   3  (bases 1 to 3242)
  AUTHORS   Cazalla,D., Newton,K. and Caceres,J.F.
  TITLE     A novel SR-related protein is required for the second step of
            Pre-mRNA splicing
  JOURNAL   Mol Cell Biol 25 (8), 2969-2980 (2005)
   PUBMED   15798186
  REMARK    GeneRIF: SRrp53 is a novel SR-related protein that has a role both
            in constitutive and in alternative splicing.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122870.4, AK012100.1, AK004742.2 and BY434520.1.
            
            [WARNING] On Apr 1, 2024 this sequence was replaced by NM_025822.5.
            
            On Sep 28, 2017 this sequence version replaced NM_025822.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083123.1, AK004742.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                AC122870.4         81813-81822         c
            11-57               AK012100.1         2-48
            58-3234             AK004742.2         2-3178
            3235-3242           BY434520.1         392-399
FEATURES             Location/Qualifiers
     source          1..3242
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 30.77 cM"
     gene            1..3242
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /note="arginine/serine-rich coiled-coil 1"
                     /db_xref="GeneID:66880"
                     /db_xref="MGI:MGI:1914130"
     exon            1..145
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
     exon            146..341
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
     CDS             148..1152
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /note="isoform 2 is encoded by transcript variant 2;
                     arginine/serine-rich coiled-coil protein 1;
                     serine/Arginine-related protein 53"
                     /codon_start=1
                     /product="serine/Arginine-related protein 53 isoform 2"
                     /protein_id="NP_080098.1"
                     /db_xref="CCDS:CCDS17394.1"
                     /db_xref="GeneID:66880"
                     /db_xref="MGI:MGI:1914130"
                     /translation="MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRRP
                     RSDSRSWSRDRQLRSHSYERRRRRRSSSSSSYGSRRKRSRSRSRGRGKPYRVQRSRSK
                     SRTRRSRSRPRPRSHSRSSERSSHRRTRSRSRDRDRRKVRDKEKREKEKDKGKDKEVH
                     SIKRGDSGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERSEEEAKRRKEED
                     QATLVEQVKRVKEIEAIESDSFVQQTFRSSKDVKKAVEPSEVQHVTAASGPASAAAEP
                     PSTGKEIDPDSIPTAIKYQDDNSLAHPNLFIEKAEAEEKWFKRLIALRQERLMGSPVA
                     "
     exon            342..467
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
     exon            468..641
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
     exon            642..678
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
     exon            679..730
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
     exon            731..799
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
     exon            800..906
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
     exon            907..1059
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
     exon            1060..3242
                     /gene="Rsrc1"
                     /gene_synonym="1200013F24Rik; SRrp53"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctcggctga agctgcctgg tgctggaacc aggaaggcgc tgagcttaaa ttgaagcaag
       61 ttctgaggac gccggtggcg ccgtggttag aagagggggt tccaggtccc cacgtcggga
      121 ggtgcgaacc cgaaggtcga gccagaaatg ggacgccggt cttcagacac tgaagaggaa
      181 agcagaagca agaggaaaaa gaaacaccgg aggcgctcgt cttcaagcag ctcttcagac
      241 agcaggacat acagccgcaa gaagggcggg aggaggccga ggtccgactc aaggtcctgg
      301 tctagagacc gccagcttcg ctcgcattct tatgagagaa gacgcaggcg cagatcaagc
      361 agcagctctt cttatggctc cagaaggaaa agaagtcgca gtcgttccag gggccgaggg
      421 aaaccctata gagttcaaag gtctcggtca aaaagcagaa ccagaaggtc caggtcaagg
      481 cctcgtccac gctcacatag tagaagcagt gaaagatcca gtcacagaag aacccgtagc
      541 aggtccaggg acagagacag acgtaaagtc cgggacaaag agaaaagaga aaaggagaag
      601 gataaaggca aagacaaaga agtgcacagc atcaaacgcg gggattctgg aaacatcaaa
      661 gctggattag aacatctgcc tccagctgag caggccaaag ccagactgca attggtcctt
      721 gaagctgctg caaaagctga tgaagcatta aaagccaaag aaaggagtga ggaagaagca
      781 aagagaagaa aagaagaaga ccaagccacc ctggtagaac aagtcaaaag agtaaaggaa
      841 atcgaagcaa ttgaaagtga ttcttttgtt cagcagacat tcagatcaag taaagacgtc
      901 aaaaaggcag tagaaccaag tgaagtgcag catgtgactg cggcatcagg accagcatcc
      961 gcagctgctg agccacccag cactggaaag gaaatagacc ctgacagcat ccccacggct
     1021 atcaagtacc aagatgacaa ttctctagct catccaaatc tatttattga aaaggccgag
     1081 gctgaagaaa agtggttcaa gagattaatc gctctccgac aagaaaggct gatgggcagt
     1141 cccgtggcct aagcacggac ttacggttgg attgacagta acctcgaaaa cttaggtcgt
     1201 aaaattatat taccaatatt aactttcact cttaaaaata atttagccaa ttacataaaa
     1261 aagaaatctc atttcttccc tcatgttcaa ctaaatatgt ggtaatttga atctaacatt
     1321 gtgaacagtg aatccgttat aaaagctctg agtgcatgaa aacatatttc actattaata
     1381 aagtgaatag taaaaaatat tagtgttgaa ataaatgaac actcagtagt gtttctcatt
     1441 acaattctta caaagtcatg gttttcacca actattagat aattttcttt acgagggcta
     1501 tgttatttag tgtgagaatg aggtttcatc tcctgtatta tgaaaccctt cttgaatccc
     1561 ttagctcccc tttcttaagg tttttaggta tcataaaagg tccgctaaga agtctaagca
     1621 atgcccatgt tagatttgag ggcaacatgt tttgtgtcaa gtgtggactc agtcctctaa
     1681 ccctaggcct ttggaggctt aggagggaag gtcccaattc cagtctacac tacacagcaa
     1741 gtattgggat acctcgggct aaatgttcat taaataaagg aatcgttttt gcttagagat
     1801 cgatttgtat cacgcgttct tttgaaacct gtaacctgac ttcagtcttt acctgtggaa
     1861 atcatatgcc caatatttta gtcatcactg tgcattgctg tgacagaaga cctggcctaa
     1921 cttcagggaa aaggtgtatt ttatttcatc ttatagtttg agcaatgtca ggccatggtc
     1981 agctggctcc actgcgtgga ggcctgtagc aggcagaaac actgcaagag gccacgtccc
     2041 aggaaagcca ctcactaatg cctgtcggga agcaaagaga caggcagggg ctaaggccat
     2101 ggtacttcag ggacatactc cagccacctg cttctagtct gtcccctacc tcctggtagc
     2161 tcactcagct ctaagtgcat ggtgcagtcc attgataaag tcctcatgct ccggtaaccg
     2221 tctcgggaca ccaccagcac acggccaggc tttaaacatt tgagcctttt ggagacagtt
     2281 catagccaga ccttaatgcc catgctagac tatgtgcctg acccagtgtc atgatggaaa
     2341 aagaatttct gagaaataag agctcttgca gcactcctgc taggcagtgt ctgccccctc
     2401 ctgaggaagc cgctgtgtcg tgtgtagaat gacattctct aatagacaag cgtggacatc
     2461 tctgaagtcc ataccaaaca tgccagaggg aagagctatg ggccttgctg tacaaaatgg
     2521 gatttcaacc cctggcacaa acactttttt ccccattttt ctctgcttgc ttttacactg
     2581 actctctgaa gactggagct gagggcacag ccatgggaag gccctgggac atgaggtcat
     2641 ttagattcca tcttttttac actttagagc tactgaagtt ctcttctctg ttaaggatga
     2701 aaagtggcag gaccttacac tcagttgcaa gtactataaa aacgtttatg ttaaaatgtt
     2761 tgttttcatg tagatgtttt cttgatctaa gcaaaggcta ttttccttgg ctctacaaat
     2821 aaacatgccg agaatgaagg aggcccatgt ggttgttaat gtgaacacgg ctatgcagta
     2881 gggatttcgg aagggattaa tctcaaatat tctgcttttt aattctttat attatttgta
     2941 aactgtgtgt tcccatgcta ttaggaagtg tatatctagg aatggatata cgctatcaat
     3001 gggtcatagg gagtcttcca cacttcttcc atctatactg caataaaaat actgtgatct
     3061 actttctagt attccttccc cctaggtttc tcaataacag gtacaccaaa tacagatgct
     3121 tgaattgtaa caaatttgca tcttaaagat aaactttttg tggaaaataa aaaaagtcaa
     3181 gctttgtttg gttttcattt gttttaagta agcaaataaa cttggtccta aagaacactg
     3241 tg
//
