LOCUS       NM_001163535            1187 bp    mRNA    linear   ROD 05-FEB-2024
DEFINITION  Mus musculus radial spoke head homolog 14 (Chlamydomonas) (Rsph14),
            transcript variant 4, mRNA.
ACCESSION   NM_001163535
VERSION     NM_001163535.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1187)
  AUTHORS   Zhang,X., Xiao,Z., Zhang,J., Xu,C., Liu,S., Cheng,L., Zhou,S.,
            Zhao,S., Zhang,Y., Wu,J., Wang,Y. and Liu,M.
  TITLE     Differential requirements of IQUB for the assembly of radial spoke
            1 and the motility of mouse cilia and flagella
  JOURNAL   Cell Rep 41 (8), 111683 (2022)
   PUBMED   36417862
REFERENCE   2  (bases 1 to 1187)
  AUTHORS   Stauber,M., Weidemann,M., Dittrich-Breiholz,O., Lobschat,K.,
            Alten,L., Mai,M., Beckers,A., Kracht,M. and Gossler,A.
  TITLE     Identification of FOXJ1 effectors during ciliogenesis in the foetal
            respiratory epithelium and embryonic left-right organiser of the
            mouse
  JOURNAL   Dev Biol 423 (2), 170-188 (2017)
   PUBMED   27914912
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY716693.1, BC147792.1 and AK017008.1.
            
            Transcript Variant: This variant (4) uses two alternate splice
            sites in the 5' region, which result in a distinct 5' UTR and
            causes translation initiation at a downstream start codon, compared
            to variant 1. The encoded protein (isoform 3) has a shorter
            N-terminus compared to isoform 1. Both variants 3 and 4 encode the
            same isoform (3).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC147792.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-28                BY716693.1         14-41
            29-1142             BC147792.1         1-1114
            1143-1187           AK017008.1         1136-1180
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 38.48 cM"
     gene            1..1187
                     /gene="Rsph14"
                     /gene_synonym="4933431K05Rik; Rtdr1"
                     /note="radial spoke head homolog 14 (Chlamydomonas)"
                     /db_xref="GeneID:71236"
                     /db_xref="MGI:MGI:1918486"
     exon            1..50
                     /gene="Rsph14"
                     /gene_synonym="4933431K05Rik; Rtdr1"
                     /inference="alignment:Splign:2.1.0"
     exon            51..295
                     /gene="Rsph14"
                     /gene_synonym="4933431K05Rik; Rtdr1"
                     /inference="alignment:Splign:2.1.0"
     exon            296..398
                     /gene="Rsph14"
                     /gene_synonym="4933431K05Rik; Rtdr1"
                     /inference="alignment:Splign:2.1.0"
     exon            399..517
                     /gene="Rsph14"
                     /gene_synonym="4933431K05Rik; Rtdr1"
                     /inference="alignment:Splign:2.1.0"
     exon            518..743
                     /gene="Rsph14"
                     /gene_synonym="4933431K05Rik; Rtdr1"
                     /inference="alignment:Splign:2.1.0"
     exon            744..880
                     /gene="Rsph14"
                     /gene_synonym="4933431K05Rik; Rtdr1"
                     /inference="alignment:Splign:2.1.0"
     exon            881..1187
                     /gene="Rsph14"
                     /gene_synonym="4933431K05Rik; Rtdr1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcagacacc aggagacttc acgcactgag gcaagtgagg cagctgtgag tttctacaga
       61 ggttcatttt caaagccctt tggcaggtgt gaaaagatgg ctcatgcccg catctccatg
      121 tatatgcctc ctgacatcga ccccacaaaa gccgccattg cttatggctg ccgggccttg
      181 agcaagctta atgaggagct acagtcaagg gatctcctga caaggcagaa agccctagtg
      241 gctctgtgtg acctcatgca cgatcctgag tatgtctacg aggccatcaa cataggctgc
      301 ctggagagcc tgaagaccct gctgcaggat gatgataacc tggtacggat aaagaccacg
      361 gaggttctat acatcatggc cacccattac gtaggcagag ttggcttctt aaagcatgac
      421 atcatccaag ccctgtcact cctgctgagt gatcaccaga ccctctgccg ggagaatcta
      481 caccaggcat acaagcatct ggcacagttg cctaaagggg cccagggtat cgtccagagt
      541 ggcctgatcc cctcgctggt acggaagctg cagaaggagg aggaccatat tcaggagatc
      601 atcttggaca ctctggcgct gtgccttcag gaggacgcca ccgaggccct agagagccaa
      661 gccgtgccct gtttaaagga gaagctcctt agccaaaact ctgaaatccg cagcaaagcc
      721 gcccgggcgc tcattgccat cagcatcccg ttggatggca agaatcaggt gtggaagaat
      781 aaagtcattc ccatcctggt gactctgttg tcagacacgg atgaggaggt gaaggccaat
      841 gccgccgggg ctctgatgca cgccacagtg accactgaag gaaaatatgc agctctggat
      901 gccaatgcta tcgaaccact cctggagttg ctttccacca accccaagac caagctgtgt
      961 ctgaatgcca caaaagccct caccatgctg gccgaagccc ccgagggccg taagttattg
     1021 ctgtcccatg ttcccatctt ccgttacctc cttgcgcata aaaacgaggc catacagcga
     1081 gcagcagaag tagccatcaa agtgattgag tggaagccat gacttccgtt ttagccagcc
     1141 cccatgggct atgtctaggc ctgaataaat gagtggaatc tcctcac
//
