LOCUS       NM_199447               4344 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus ribosomal RNA processing 12 homolog (Rrp12), mRNA.
ACCESSION   NM_199447 XM_129351
VERSION     NM_199447.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4344)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Aizawa,H., Yuasa,S.,
            Nakajima,D., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: II. The complete nucleotide sequences of 400 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (1), 35-48 (2003)
   PUBMED   12693553
REFERENCE   2  (bases 1 to 4344)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC062977.1.
            
            On Jan 13, 2004 this sequence version replaced NM_199447.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC062977.1, AK146550.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4344
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 35.36 cM"
     gene            1..4344
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /note="ribosomal RNA processing 12 homolog"
                     /db_xref="GeneID:107094"
                     /db_xref="MGI:MGI:2147437"
     exon            1..215
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..3964
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /codon_start=1
                     /product="RRP12-like protein"
                     /protein_id="NP_955518.1"
                     /db_xref="CCDS:CCDS29814.1"
                     /db_xref="GeneID:107094"
                     /db_xref="MGI:MGI:2147437"
                     /translation="MGRSGKLPSGVSAKLKRWKKGHSSDSNPATCRHRQAARSRFFSR
                     PSGKSDLTVDAVKLHNELQSGTLSLGKSQAPETTMDQDPEVAFTEKSSGTFLSGLSDC
                     TNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVES
                     PESLAAVAYLLNLVLKRVPSPVLMKKFSDTSKAFMDIMSAQASSGSTSALRWVLSCLA
                     ILLRKQDLEAWGYPITLQVYHGLLSFTVHAKPKIRKAAQHGVCSVLKGSDFMFGEKAP
                     AHHPAAVSTAKFCIQEIEKSGGSKEATTTLHMLTLLKDMLPCFPEGLVKSCSETLLRV
                     MTLNHVLVTACAMQAFHNLFHAKPSPSTLSAELNAQIVTALYDYVPSENDLQPLLAWL
                     KVMEKAHINLVRLQRDLGLGHLARFFGTAVTCLLSPHSQVAAAATQTLKEILKECVAP
                     HIADIGSVTSSASGPPQYITKMFRAVEEGLTYKFHAAWSSVLQLLGVFFEACGKQAHP
                     VMKKCLQSLCDLRLSPHFPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEETLDFP
                     RSWLLPVIRDHVRETRLGFFTTYFLPLATTLKRKAMDLAQAGSTVESKIYDTLQWQIW
                     TLLPGFCTRPTDVAASFKGLARTLGTAINERPDLRVTVCQALRTLITKGCEAEADRAE
                     VSRFAKNFLPILFNLYGQPVAAGEAAAPRRAVLETIKTYLTITEAQLVNSFLEKATEK
                     VLDPASSDFTRLSVLDLVVALAPYSDEAAISKLYSTIRPYLESKVHGVQKKAYRVLEE
                     VCASSQGPAARFVQSHLDDLKKTLLDSLRTTSSPAKRPRLKCLIHIVKTLSAEHEEFI
                     AALIPEVILCTKEVSVGARKSAFTLLVEMGHAFLRFGSNQEDALQRYLVLIYPGLLGA
                     VTTVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKSALGFIKVAVV
                     VMDVVHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFIKFTRKFGFELVKGLLPAEYH
                     KVLINIRKAETRAKKHRALSQAAVEEEEEEEEEEEPVQSKGDSIEEILADSEDEDEEE
                     ERGRGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAHRVLATQPGPGRGKKRDHGFK
                     LSADGRLIIREEEDGNKVEEEDGTKGEDEDMTDAMEDASVRSKKKLKRQREDEEDELE
                     IPPRYQAGGSGIHRPVAKKAAPGAEYKAKKAKGDVKKKGRLDPYAYVPLNRSKLNRRK
                     KVKLQGQFKGLVKATQRGSQAGHKLRRKDRRRP"
     exon            216..445
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            446..529
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            530..606
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            607..712
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            713..829
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            830..968
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            969..1096
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            1097..1195
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            1196..1287
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            1288..1399
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            1400..1497
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            1498..1612
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            1613..1755
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            1756..1877
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            1878..1942
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            1943..2105
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            2106..2260
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            2261..2328
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            2329..2422
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            2423..2581
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            2582..2662
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            2663..2768
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            2769..2876
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            2877..3034
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            3035..3126
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            3127..3294
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            3295..3464
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            3465..3590
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            3591..3640
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            3641..3707
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            3708..3775
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            3776..3858
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     exon            3859..4320
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4296..4301
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /note="hexamer: AATAAA"
     polyA_site      4315
                     /gene="Rrp12"
                     /gene_synonym="mKIAA0690"
                     /note="major polyA site"
ORIGIN      
        1 gccgtggctt ctgctgtctt ttcggcgtgt gtggacgctt gttctctggg cgagtgcgag
       61 ccaccgtttg gtcaacatgg gtcgctcggg gaaattgccc tctggtgtct cggccaagtt
      121 gaagcgctgg aagaaaggcc acagcagcga cagcaacccc gccacttgcc gccatcgcca
      181 ggccgctcgg agccgcttct tcagccgccc gtcaggaaag agcgacctga ctgttgatgc
      241 tgtgaagttg cataatgagc tgcagtcggg gaccctgagc ctgggcaaaa gccaagcccc
      301 tgagacgacc atggaccaag atccagaggt ggctttcacc gagaagtcct cgggcacgtt
      361 tctgagtggc ttgtctgact gtacaaatgt cactttcagc aaagtgcagc gcttctggga
      421 atccaactca gctgctcaca aggagatctg cgctgtgctg gctgctgtta cagaggtgat
      481 tcgatcccag ggaggcaagg agacggagac cgagtacttt gctgctctga tgacaacaat
      541 ggaagcagtg gagtccccag agtcactggc tgccgttgca tacctattga accttgtcct
      601 gaagcgggtg ccaagtcctg tgctcatgaa gaagttctct gatacctcca aagccttcat
      661 ggacatcatg tctgcgcagg cgagcagtgg ctccacctct gctctccgat gggtcctctc
      721 ctgcctggcc atcctccttc ggaagcaaga cctggaggcc tggggctatc ccatcaccct
      781 tcaggtgtac catggactgc tgagcttcac cgtgcatgcc aagccgaaga tccgtaaggc
      841 tgctcagcac ggagtgtgct cagttctcaa gggcagtgac ttcatgtttg gtgaaaaggc
      901 ccctgcccat catcctgctg ccgtctccac tgccaagttc tgcatccagg agattgagaa
      961 gtctggaggt tccaaagagg ccaccaccac gctgcatatg ctaacactgc tgaaggacat
     1021 gctgccctgc ttcccggaag gcctggtgaa gagctgcagt gagactctgc ttcgggtcat
     1081 gaccttgaac catgtgcttg tgacagcctg tgccatgcag gccttccata acctcttcca
     1141 tgccaagccc agccctagca ccctgtcagc agaactcaac gcccagatcg tcacggcact
     1201 atatgactac gttcccagtg agaatgattt acagcccctg ctggcctggc ttaaggtcat
     1261 ggagaaagcc cacatcaacc tggtcaggct gcagcgagac ctggggctag gccatcttgc
     1321 tcgatttttc ggaaccgcag tgacctgtct tctctcgcct cattcacaag tggcggcggc
     1381 tgctacccag actctcaagg agatcctgaa ggagtgtgtg gctccacaca ttgctgacat
     1441 tggctctgtg acctcttcag cctcaggtcc tccccagtac atcactaaga tgttcagggc
     1501 agtggaagag ggcctcacat acaaatttca tgcagcctgg agctctgtgc tgcagctcct
     1561 gggggtcttc tttgaagctt gcggaaagca ggcccatcct gtgatgaaga agtgcctcca
     1621 gtccctgtgt gacctgcgcc tctctcctca cttcccccac acagcagccc tggaccaggc
     1681 tgtaggggct gcagtgacca gcatgggtcc cgaggtggtg ttgcaggccg tgcccttgga
     1741 aatcgatggc tctgaggaga ctctggattt cccacggagc tggctgctgc ctgtcatccg
     1801 ggatcatgtt cgggaaacca ggcttggttt cttcaccact tacttcttgc ccttggccac
     1861 cactcttaag agaaaagcaa tggacctggc tcaggcaggc agcacagtgg agtcgaagat
     1921 ttatgataca ctccagtggc agatctggac cctcctgcct gggttctgca caaggcccac
     1981 agatgtggct gcctccttca aaggcctggc acggactctg ggcacagcta tcaatgaacg
     2041 cccagacctg agggtcactg tgtgccaggc cctacgtacc ctcatcacta agggctgtga
     2101 ggcagaggct gaccgagctg aagtgagccg ctttgccaaa aacttcctgc caatcctctt
     2161 caacctgtat gggcagcctg ttgcagctgg agaggcggca gcccctcgcc gtgctgtgct
     2221 ggaaaccatc aaaacttacc tcaccataac tgaggctcag ttggtgaata gcttcctgga
     2281 aaaagccacc gagaaggttc tcgatcctgc cagctctgat ttcaccagat tgtctgtcct
     2341 ggatctggtt gtggctttgg ctccttactc ggatgaagct gccatcagta agctatactc
     2401 taccatccgg ccctaccttg agagcaaggt ccacggtgta cagaagaagg cctaccgcgt
     2461 gctggaggag gtgtgtgcca gttctcaggg cccggcagcc cgcttcgtgc agagccacct
     2521 ggatgatctg aagaagactc tgctggactc gcttcggacc acatcctcgc ctgctaaaag
     2581 gccccgtttg aagtgcctca tacatattgt gaagacgctg tcggctgagc atgaggagtt
     2641 catagctgcc ctcatcccag aggtgatcct gtgcaccaag gaggtgtcag tgggtgcaag
     2701 gaagagtgcg tttaccttgc tggtggagat gggccatgct ttcctgcgat ttggctccaa
     2761 ccaggaagac gctctgcagc ggtaccttgt cctcatctat cctggccttc tgggtgcagt
     2821 taccacagtt agttgcagca ttttggctct gacccacctc ttgtttgagt tcaaagggct
     2881 gatggggacc agcacagtgg agcagctcct ggagaacgtg tgcctgctgc tggcctctcg
     2941 aacccgtgat gtggtcaagt ccgcgctagg cttcatcaag gttgctgtgg tggtcatgga
     3001 cgtggtgcac cttgctaagc atgtgcagct agtgatggaa gccattggga agttgtcaga
     3061 tgacatgcga cggcacttcc ggatgaagct tcggaacctg ttcatcaagt tcacccgcaa
     3121 gtttggattc gagttggtga agggtctgct acccgcagaa taccacaaag tcctgataaa
     3181 catcaggaaa gctgagaccc gagccaagaa gcatcgtgcc ctgagccagg ctgctgtaga
     3241 ggaggaggaa gaggaggaag aggaagagga gcctgtccag agcaaaggtg acagcattga
     3301 ggagattttg gctgactctg aggatgagga tgaggaagaa gaaagaggcc ggggcaagga
     3361 gcagcggaag ctggcacgac agaggagccg ggcatggctg aaggaaggtg gtggcgatga
     3421 gcccctcaac ttcctggatc ccaaggtggc ccatcgagtc cttgccaccc agcctgggcc
     3481 tgggcggggc aagaagaggg accatggctt caagttgagt gctgatggcc ggctgatcat
     3541 acgggaggag gaagatggaa acaaggtgga ggaagaagat ggcactaaag gggaagatga
     3601 agacatgacc gatgcgatgg aggatgccag tgtgagaagt aaaaagaagc ttaagcggca
     3661 gagggaggac gaggaggatg agctggagat cccacctcgg taccaagctg gaggctctgg
     3721 catccatcgc cctgtggcta agaaggctgc acctggagct gaatacaagg ccaagaaggc
     3781 aaaaggcgat gtaaagaaga agggccgcct ggatccctat gcgtacgttc cactcaacag
     3841 atccaagctc aaccgcagga agaaggtgaa gctccagggg cagtttaaag gtctggtgaa
     3901 agccacccag cggggatccc aggcgggaca caaactccgc agaaaggatc ggcggcggcc
     3961 ctgaatccct ctggggaatg gagctgttct ctgctgtggt ccagggcccc tttctaactc
     4021 ccatgatgtt taacaccaac tccaggtgtg agccttgcta aacctggaca gagaatgact
     4081 cattggaagc aggactcatt tctaagagag atagatgcct aggattttgg aaactattgt
     4141 cctttggaga cattgccaac atctaggagt ggaaatgtga cgtcgctacc tctgagaagg
     4201 ccttaagtgg tgctctgctt tctgtccaat gtggccatga gagcagagtg atgactgtgg
     4261 tctgcgtgtg taagatctgc tctaaccagg cgtagaataa atgtgcatga ccatgtttca
     4321 aaaaaaaaaa aaaaaaaaaa aaaa
//
