LOCUS       NM_146244               2534 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus ribosomal protein S6 kinase-like 1 (Rps6kl1),
            transcript variant 2, mRNA.
ACCESSION   NM_146244
VERSION     NM_146244.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Sundberg,J.P., Dadras,S.S., Silva,K.A., Kennedy,V.E., Garland,G.,
            Murray,S.A., Sundberg,B.A., Schofield,P.N. and Pratt,C.H.
  TITLE     Systematic screening for skin, hair, and nail abnormalities in a
            large-scale knockout mouse program
  JOURNAL   PLoS One 12 (7), e0180682 (2017)
   PUBMED   28700664
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2534)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY124367.1, AK044050.1 and BY651033.1.
            
            On Aug 5, 2009 this sequence version replaced NM_146244.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK044050.1, BC027298.2 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                BY124367.1         1-10
            11-2513             AK044050.1         2-2504
            2514-2534           BY651033.1         399-419
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 39.57 cM"
     gene            1..2534
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /note="ribosomal protein S6 kinase-like 1"
                     /db_xref="GeneID:238323"
                     /db_xref="MGI:MGI:2443413"
     exon            1..102
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            103..387
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            388..512
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            513..605
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            606..653
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            654..786
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            787..1377
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1378..1467
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1468..1550
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1551..1646
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1647..2534
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2350..2355
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2371
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /note="major polyA site"
     regulatory      2436..2441
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2456
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
     polyA_site      2494
                     /gene="Rps6kl1"
                     /gene_synonym="A830084F09Rik"
ORIGIN      
        1 gcccccaggc acctgcggaa gggtggtagg cacagacgga gccttgcaga aggtgaaggg
       61 acagcgttgg cgggaaggcc cggagctctg gcacgcggac aggtcacaac agcagggcca
      121 ctatgagcct ggtagcctgt gaatgtccac ctggaccagg cctggagcca gagccctgtt
      181 cacgagcacg gtcccaggcc tgcatgtacc tggaacagat tcgtaaccgg gtagctacag
      241 ggacagccga tgtgaccaaa cgtgactacc tggtagatgc agctacacag atccacctgg
      301 cactggagcg agatgtcagt gaagactacg aggctgcctt caaccactac cagaatggtg
      361 tggacgtgct actccgcggt gtgcatgttg accccaacaa ggagaggcgt gaagctgtga
      421 agctgaaaat taccaagtac ctacggaggg cagaggagat cttcaactgc cacctgcagc
      481 ggaccctggg cagtggagcc agtcccaaca cgggcttcag cagcttgagg ctccggccca
      541 tccgcacact gagctctgct ctggagcagc tgaagggatg cagggtcgtt ggcatcatca
      601 agaaggtgca ggtggttcag gacccggcaa ctggaggaac cttcatcgtg aagagcctcc
      661 ccaggtgtca catggtgagc cgggagcggc tgacgatcat cccacatggc gtcccctaca
      721 tgacaaaatt gttgcgatac ttcgtgagcg aggactccat cttcctgcac ctggagcatg
      781 tgcaaggagg caccctttgg tcacatctac tctcccagga ccattttcaa tactctgggc
      841 ttaactctgg ctcggttcag gagaagtcgc aagcccaact cagcacccgc ctcagcctca
      901 tgaccccagc ggagctcaca ccaggccata ccctgaggca gaacagaatc ccaatggagc
      961 ctccacggac ttcccagagc ctacccccag ccctccagct tcagaaagag gccgatgctg
     1021 agccttcatc caggcccagt gctgtcttct cttcagaccc cacagaggcc ccgtgtggcc
     1081 actcgcacag tcaagttagg cgagctggcc agagttcgaa cccagcaccc acgcagaggc
     1141 tccactgggt acgagaaggg gctgaccggg tgctaggagc ctatggccga ggcaggggtc
     1201 ggaacccccc atcagcaaac agggccagcc tggggagcgg aagagctgcc tggagcctga
     1261 gggagggaca ggtgaagcag tgggcagctg agatgctgct ggcattagag gcgctgcatc
     1321 agcagggggt gctgtgccgg gacctcaacc cacagaacct gctcctggac caggcaggtc
     1381 acatccaact cacgtatttt ggccagtggt cagaagtgga gccgcgatgc agccaggagg
     1441 ccgtggactg tctgtacagt gctccagagg ttgggggcat ttctgagctg actgaagcct
     1501 gtgactggtg gagctatggc tcactcctgt atgaactgct cacaggaatg gcactgtccc
     1561 agagccaccc ttcaggattc caggcccaca cccaactcca gctgcctgag tggcttagtc
     1621 acccagcagc ttctctgcta actgagctgc tgcagtttga gccccagcgg cgcctaggag
     1681 ctggaggtgg tggcaccagc agactcaagt cccatccctt tttcagtact atccagtgga
     1741 gccggctaat ggggtaggag gcggggaatg gacagtgtgg ctggcccagt tctcttgact
     1801 gtctaccagc tgggctggcc cctcccctca gtggacttca ggggaagcat gtggcgcagc
     1861 agccactttt tctgctcaca acctgcttgg gcctcagact ggtgaagctg ctgcaagggc
     1921 agagaggtgc accccgtcga gcaacctacg ctcaccagcc aacagatacc tgctgaccac
     1981 acagcttgga cctttagctg ggacctagca tctcaaaggg tgccttctgt tgctctagtt
     2041 ccaaactgct caacacccat tgagccgact gatgaatctg ggaacactgc catctgtaca
     2101 ccacgtaggg catctctgga gacatctcag gacactgaac ctctggctca gtagacccaa
     2161 accaggactg tcctggatcc actttagtca tgctaccagt gggctgctac aaccagatgc
     2221 cgttcctaca gaggtccggg tgctgggagg gtctgtagga aagtctgtag ggtgaagtgg
     2281 ggagaggtgg gacacagtgt gagccactcg ccactcctga cccctaactt ctgatttctg
     2341 actttggaga ataaaatcaa ggcaaagaga agccagtgtg tttaagagcg ggataagaat
     2401 gcggttgtac cacttaagac ggagtttgaa aacagaataa agcgctttat tctctggctg
     2461 gctctcctgt gtcagaagag ctcgctccac aggaccagca gtcagttctt ctcaggtgtt
     2521 gttttccact ctgc
//
