LOCUS       NM_178775               4034 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus ribosomal protein S6 kinase polypeptide 1 (Rps6kc1),
            mRNA.
ACCESSION   NM_178775 XM_484954
VERSION     NM_178775.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4034)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4034)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ045347.1, AK149858.1, BG079911.2 and BC058403.1.
            
            On Apr 20, 2010 this sequence version replaced NM_178775.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-36                CJ045347.1         2-37
            37-2673             AK149858.1         2-2638
            2674-2681           BG079911.2         48-55
            2682-4034           BC058403.1         1381-2733
FEATURES             Location/Qualifiers
     source          1..4034
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 96.2 cM"
     gene            1..4034
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /note="ribosomal protein S6 kinase polypeptide 1"
                     /db_xref="GeneID:320119"
                     /db_xref="MGI:MGI:2443419"
     exon            1..215
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            216..251
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            252..372
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            373..488
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            489..582
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            583..942
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            943..1058
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            1059..1151
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            1152..1199
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            1200..1332
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            1333..2901
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            2902..2991
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            2992..3074
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            3075..3170
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     exon            3171..3995
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3975..3980
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /note="hexamer: AATAAA"
     polyA_site      3994
                     /gene="Rps6kc1"
                     /gene_synonym="B130003F20Rik; Rpk118"
                     /note="major polyA site"
ORIGIN      
        1 aggagccacc gccccctctt cgcggtgctc gtgcttagtg ctgcgtggag tccggcacag
       61 ctggggctgc ccgatggtcc ccagctggcg gaagcacggg cggagggagg atgacctctc
      121 cttggggtca cagtgcggac ctggcccgct tctacactgt caccgagccc cagcgacacc
      181 ccaggggcta cactgtctat aaggttaccg cacgggttgt ttcacggaga aatccagagg
      241 acgtccagga gataattgtg tggaggagat acagtgactt caagaaactg cacagagaat
      301 tatggcaaat tcacaggaat gcatttcgac actctgagct atttcccccg tttgctaaag
      361 ggacagtgtt tgggcggttc gacaagacgg tgattgagga gcgacggcag tgtgctgagg
      421 acctgctgca gttctctgcc aacatccccg ccctgtacaa cagcaggcag ctccaggact
      481 tcttcaaggg tggggtaatt agtgatggct ctgagttaat tggccctgct gaagcttacc
      541 cagactcccc ggccaacgcc tttcctgagt gcggtactga aggattctcc agtgacagtg
      601 accttctgtc cctcactgtt gatgcagact ctcttgccga ggtagatgat ggaatggctt
      661 cccgtcaggg ttctcccagt agaacctttg gtctgagtct gtctacggat tcttcggcag
      721 taggggctgt tgcttctgac agtgaaccaa gcagagtaga agaccgggaa agccgcagcc
      781 tcttccccag cagcttaaag ccaaggcttg gcaggagaga ttacctggag aaggcagggg
      841 aacttatcaa actggcctta aagaaggagg aggaagatga ctatgaagct gcttctgact
      901 tttacaggaa gggcgtcgat ctgctcctag aaggtgtaca aggagagtcg agccccacgc
      961 gtcgggaggc tgtgaagaga aggactgcgg agtacctcat gcgtgcagag agcatctgta
     1021 gcctccgggc cgcgcctcag ctccacacgg gaccacagcc tccaggatca ctaagttcaa
     1081 ggcccccttg gagcctgagg agccctgccg aggagctgaa ggccttccga gtccttgggg
     1141 tgattgacaa ggttttactt gtaatggata caaggacaga gcagacattc attttaaaag
     1201 gtctaaggaa aagcagcgag tgcagcagga acagaaagac catcatcccc cgctgtgtgc
     1261 ctaacatggt gtgtctgcac acgtacatca tctcggagga atcggtgttt ctcgtgctgc
     1321 agcgcgccga aggtggaaaa ctctggtcgt atatcagtaa atttctgaac agaagctctc
     1381 aggaaagctt ggacattaag gaagggagac cgtccatgcc tcctcgagtg tgcctgcagc
     1441 agccaagtgc cagtccccag ggcggcagca gcttcgagtc cagagggagc gacacgggga
     1501 gcatgctgaa ggctctgcct ctgaagacca gtctcacccc gagttctcaa gacgacagca
     1561 accaggaaga cgacggccag cccagctctc ccaagtggct ggattcgggc tccagttcag
     1621 aggatgagtg cacagcgggc tacctgacgc tgtgcaacga gtatgggcaa gaaaagatgg
     1681 acctggtgtc tctgagcgag gagtctgtta tgcagcctga aggggacaag gctgacaccc
     1741 aggcggttag ttccccagca tccctcgcca ctggcagtgt gagccctagc acccacctca
     1801 gggtcttctc tggaggtgag gatctagagg cggtttcttc tcctccaaca tctgaatccc
     1861 tcagtaggtc aaaaaacagc cctatggaat tcttcagaat agacagtaaa gacagcacaa
     1921 gtgagctcct gggactggat tttggtgaga aattacacag tctgaaacca gagcctttga
     1981 aagccctctt tacccttgaa gatggagaca gcccttctca gagtcttgat cctggtgaga
     2041 gcaagagaga gagtgaagct caggactccg tgagccgggg ctcagatgat tccgtcccag
     2101 ttatctcatt taaagaggcg gctgcagagg ctatcagtgg ggctgaggag ggaaggcctg
     2161 accttcttgt gaatttacct ggggaactgc agccaaccaa agaggcttca gcaatggacc
     2221 ctaagttttc acaggccagt gcaggcaggc tggatagtaa actgctggaa gccccggatg
     2281 tgttgtgcct caggctgagt tctgaacagt gccatggtct gggaccagaa ggcccagagg
     2341 aactgagcga tcccactgaa ttctgtcccg gaggtgtgat cccagagcac gatgctcagg
     2401 cagatcccgg ggtgctattc gaggctgccg ttgatcacag gagctcccca gaccagtttc
     2461 tgttttccag cttgcgttcc gagtctgaca ggctggggca ggtggaggta gtggtcactg
     2521 cacaggcctt gcaagaaagc ctgttccaca tttctagtcc ctgctcaggt gctaataaag
     2581 aacacagtgc atacgccgac actgccacgt cggaggaggt gttgctgttc acagaaccga
     2641 ctaaagaaga agcgaactct ctgttccaga gagactcgga ggcccaggag cgaggtgtgg
     2701 gagccgggga agcagacaag gaaatccatc agatctttga ggacctggat aaacgactag
     2761 cagctagctc caggttcttc atcccagagg gctgcattca gagatgggca gcggaaatgg
     2821 tggtagccct tgacgccttg cacagagagg ggattgtgtg ccgagatctg aacccaaaca
     2881 acatcttatt gaatgatgga ggacacattc agctaacgta ttttagcagg tggagtgagg
     2941 ttgaagattc ctgcgacagc gatgccgtag cgagaatgta ctgtgcccca gaggttggag
     3001 cagtcacaga agaaactgaa gcctgtgatt ggtggagcct gggtgctgtc ctcttcgaac
     3061 ttctcactgg caagacgttg gtggaatgcc acccagccgg aataaatacc cacactactt
     3121 tgaacatgcc aggttgtgtt tctgaagagg ctcgctcact catccaacag ctcctgcagt
     3181 tcaaccctat ggagcgcctg ggtgctggag tggctggtgt tgaagatatc aaatctcacc
     3241 cgtttttcac ccctgtggat tgggcagagt tgacaagatg aacaccacaa ggattgtcct
     3301 taccagacag gtccctggtg acagagttca ggagtggctg ggcttcaggc accttgcagc
     3361 tagtgtgcca gagtcttggg acaaggacct tagaggaagt gatggggcag gagattaaca
     3421 gattgtctta cacttgctgt ctggaaagag aagagctagc cgccccagca gctgctatgt
     3481 gcacaccttc cccaaggtga gacgtaactt gctcagtgta ccgccttgcc aggaggctgg
     3541 aagtacagaa ggaagactga tgggagtcaa ggaccctttg gtggcagctg atggtgcttc
     3601 tgctaaacaa gactggttta cacgatatag tcaatactgc tgagtgacac taaatgcgct
     3661 ctgtgaacag tgtcaccagt agactggcaa aacaaaatgg agtgcccagt gctgagcagg
     3721 ctggctacct ctgaggaaaa acactcttgc cagctttgaa ctttctggtc gatgctacta
     3781 actctgaggg gctcctggga gcacacatgt ccgtccccca gttcccctct cccctgcgct
     3841 atttcctgca tcctctgctg cgtcttttgg attctgcttt tcctacttct gttaacacac
     3901 atgcagtgag aaagggaggg gtatttattt cccccaaact gccagcttaa caagactaag
     3961 aaatcatggt gtcaaataaa tgtggttaaa ccttgaaaaa aaaaaaaaaa aaaaaaaaaa
     4021 aaaaaaaaaa aaaa
//
