LOCUS       NM_013765                457 bp    mRNA    linear   ROD 31-JUL-2024
DEFINITION  Mus musculus ribosomal protein S26 (Rps26), mRNA.
ACCESSION   NM_013765
VERSION     NM_013765.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   3  (bases 1 to 457)
  AUTHORS   Zhao,Q., Yan,S., Lu,J., Parker,D.J., Wu,H., Sun,Q., Crossman,D.K.,
            Liu,S., Wang,Q., Sesaki,H., Mitra,K., Liu,K. and Jiao,K.
  TITLE     Drp1 regulates transcription of ribosomal protein genes in
            embryonic hearts
  JOURNAL   J Cell Sci 135 (4) (2022)
   PUBMED   35099001
REFERENCE   4  (bases 1 to 457)
  AUTHORS   Serin,N., Dihazi,G.H., Tayyeb,A., Lenz,C., Muller,G.A., Zeisberg,M.
            and Dihazi,H.
  TITLE     Calreticulin Deficiency Disturbs Ribosome Biogenesis and Results in
            Retardation in Embryonic Kidney Development
  JOURNAL   Int J Mol Sci 22 (11), 5858 (2021)
   PUBMED   34070742
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 457)
  AUTHORS   Liu,X.M., Yan,M.Q., Ji,S.Y., Sha,Q.Q., Huang,T., Zhao,H., Liu,H.B.,
            Fan,H.Y. and Chen,Z.J.
  TITLE     Loss of oocyte Rps26 in mice arrests oocyte growth and causes
            premature ovarian failure
  JOURNAL   Cell Death Dis 9 (12), 1144 (2018)
   PUBMED   30451825
  REMARK    GeneRIF: Specific knockout of Rps26 in mouse oocytes resulted in
            retarded follicle development from pre-antral follicles to antral
            follicles, while the chromatin configurations of the oocytes were
            arrested at the transition from the non-surrounded nucleolus (NSN)
            to surrounded nucleolus (SN)-type
            Publication Status: Online-Only
REFERENCE   6  (bases 1 to 457)
  AUTHORS   Yu,Y., Zuo,X., He,M., Gao,J., Fu,Y., Qin,C., Meng,L., Wang,W.,
            Song,Y., Cheng,Y., Zhou,F., Chen,G., Zheng,X., Wang,X., Liang,B.,
            Zhu,Z., Fu,X., Sheng,Y., Hao,J., Liu,Z., Yan,H., Mangold,E.,
            Ruczinski,I., Liu,J., Marazita,M.L., Ludwig,K.U., Beaty,T.H.,
            Zhang,X., Sun,L. and Bian,Z.
  TITLE     Genome-wide analyses of non-syndromic cleft lip with palate
            identify 14 novel loci and genetic heterogeneity
  JOURNAL   Nat Commun 8, 14364 (2017)
   PUBMED   28232668
  REMARK    Publication Status: Online-Only
REFERENCE   7  (bases 1 to 457)
  AUTHORS   Jang,C.W., Shibata,Y., Starmer,J., Yee,D. and Magnuson,T.
  TITLE     Histone H3.3 maintains genome integrity during mammalian
            development
  JOURNAL   Genes Dev 29 (13), 1377-1392 (2015)
   PUBMED   26159997
REFERENCE   8  (bases 1 to 457)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   9  (bases 1 to 457)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   10 (bases 1 to 457)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU530648.1, AK012722.1 and AV585706.1.
            
            On Aug 1, 2009 this sequence version replaced NM_013765.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU556256.1, CF739441.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN02415134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-5                 BU530648.1         2-6
            6-415               AK012722.1         4-413
            416-457             AV585706.1         370-411
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 77.11 cM"
     gene            1..457
                     /gene="Rps26"
                     /note="ribosomal protein S26"
                     /db_xref="GeneID:27370"
                     /db_xref="MGI:MGI:1351628"
     exon            1..31
                     /gene="Rps26"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..376
                     /gene="Rps26"
                     /note="40S ribosomal protein S26"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS26"
                     /protein_id="NP_038793.2"
                     /db_xref="CCDS:CCDS36090.1"
                     /db_xref="GeneID:27370"
                     /db_xref="MGI:MGI:1351628"
                     /translation="MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNI
                     VEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFR
                     PAGAAPRPPPKPM"
     exon            32..209
                     /gene="Rps26"
                     /inference="alignment:Splign:2.1.0"
     exon            210..340
                     /gene="Rps26"
                     /inference="alignment:Splign:2.1.0"
     exon            341..448
                     /gene="Rps26"
                     /inference="alignment:Splign:2.1.0"
     regulatory      419..424
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rps26"
                     /note="hexamer: AATAAA"
     polyA_site      441
                     /gene="Rps26"
                     /note="major polyA site"
ORIGIN      
        1 ggatcctctt tcgagtcttg gctccaagat gaccaaaaaa agaagaaaca acggtcgcgc
       61 caaaaagggc cgcggccatg tgcagcccat tcgctgcacg aactgcgccc ggtgcgtgcc
      121 caaggataag gccatcaaga agtttgtcat tcggaacatt gtagaagccg ctgctgtcag
      181 ggacatatct gaagcaagcg tcttcgacgc ctacgtgctt cccaagctct atgtcaagct
      241 gcattattgc gtgagctgtg ccatccatag caaggttgtt aggaatcgat cccgcgaggc
      301 ccggaaggac cgaacacccc caccacgatt cagacctgct ggcgctgcac ctcgacctcc
      361 accaaagccc atgtaaagag gccgttttgt aaggacggaa ggaaaattac cctggaaaaa
      421 taaaatggaa gttgtacttt acatggcaaa aaaaaaa
//
