LOCUS       NM_024266                701 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus ribosomal protein S25 (Rps25), mRNA.
ACCESSION   NM_024266
VERSION     NM_024266.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   3  (bases 1 to 701)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
REFERENCE   4  (bases 1 to 701)
  AUTHORS   Trinidad,J.C., Specht,C.G., Thalhammer,A., Schoepfer,R. and
            Burlingame,A.L.
  TITLE     Comprehensive identification of phosphorylation sites in
            postsynaptic density preparations
  JOURNAL   Mol Cell Proteomics 5 (5), 914-922 (2006)
   PUBMED   16452087
REFERENCE   5  (bases 1 to 701)
  AUTHORS   Katoh,M. and Katoh,M.
  TITLE     Germ-line mutation of Foxn5 gene in mouse lineage
  JOURNAL   Int J Mol Med 14 (3), 463-467 (2004)
   PUBMED   15289901
REFERENCE   6  (bases 1 to 701)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079541.1.
            
            On Aug 23, 2004 this sequence version replaced NM_024266.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079541.1, CA326106.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 24.84 cM"
     gene            1..701
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /note="ribosomal protein S25"
                     /db_xref="GeneID:75617"
                     /db_xref="MGI:MGI:1922867"
     exon            1..44
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             42..419
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /note="40S ribosomal protein S25"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS25"
                     /protein_id="NP_077228.1"
                     /db_xref="CCDS:CCDS40600.1"
                     /db_xref="GeneID:75617"
                     /db_xref="MGI:MGI:1922867"
                     /translation="MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKL
                     NNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSK
                     HRAQVIYTRNTKGGDAPAAGEDA"
     exon            45..140
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            141..324
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            325..423
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            424..684
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      449..454
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /note="hexamer: AATAAA"
     polyA_site      470
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /note="major polyA site"
     regulatory      652..657
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
                     /note="hexamer: AATAAA"
     polyA_site      684
                     /gene="Rps25"
                     /gene_synonym="2810009D21Rik"
ORIGIN      
        1 agcgaggctg ctgtggtcta cacgactctc tgagcttcgc catgcctccc aaagacgaca
       61 agaagaagaa agatgccgga aagtcggcca aaaaggataa agacccagta aataaatctg
      121 gtggcaaggc caagaagaag aagtggtcca aaggcaaagt tcgggacaag ttgaacaatc
      181 ttgtcctgtt cgacaaagcg acatacgaca agctctgtaa ggaggttccg aactataagc
      241 ttattactcc agccgtggtc tctgagagac tgaagattcg cggttccttg gccagggcag
      301 cccttcagga gctccttagt aaaggactta tcaagctggt ttcaaagcac agagcccaag
      361 taatttacac cagaaacaca aagggtgggg acgctccagc tgctggcgaa gatgcatgaa
      421 caggttcaat cagctgtaca tttggaaaaa taaaacttta ttgaatcaaa tgaatgggtg
      481 catctgtttc ctaaggcagc cggggaggat ttggtcttag gaataatagc tggaattggt
      541 ttgttggcca tgaagtcaga tgcaattgcg cctgggaacc ttcagctttt ccctttacgt
      601 ggttgcttgc ttcttgttgc agcttcggtt ttgaattgat gcctgaaaga aaataaaaac
      661 ttagcaagac taatggtaaa tctaaaaaaa aaaaaaaaaa a
//
