LOCUS       NM_175109                830 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Mus musculus ribosomal protein S19 binding protein 1 (Rps19bp1),
            mRNA.
ACCESSION   NM_175109
VERSION     NM_175109.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 830)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 830)
  AUTHORS   Lee,S.H., Yang,J.H., Park,U.H., Choi,H., Kim,Y.S., Yoon,B.E.,
            Han,H.J., Kim,H.T., Um,S.J. and Kim,E.J.
  TITLE     SIRT1 ubiquitination is regulated by opposing activities of
            APC/C-Cdh1 and AROS during stress-induced premature senescence
  JOURNAL   Exp Mol Med 55 (6), 1232-1246 (2023)
   PUBMED   37258580
  REMARK    GeneRIF: SIRT1 ubiquitination is regulated by opposing activities
            of APC/C-Cdh1 and AROS during stress-induced premature senescence.
REFERENCE   3  (bases 1 to 830)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. doi:
            10.1038/nature24643. PMID: 29144450]
REFERENCE   4  (bases 1 to 830)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   5  (bases 1 to 830)
  AUTHORS   Maeda,N., Toku,S., Kenmochi,N. and Tanaka,T.
  TITLE     A novel nucleolar protein interacts with ribosomal protein S19
  JOURNAL   Biochem Biophys Res Commun 339 (1), 41-46 (2006)
   PUBMED   16289379
  REMARK    GeneRIF: identified a novel protein, which was named S19 binding
            protein (S19BP). No known functional motifs were found in S19BP
            except a short polylysine tract embedded in a putative nucleolar
            localization signal.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY237968.1, BC050115.1 and AV119568.1.
            
            On Jul 16, 2005 this sequence version replaced NM_175109.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY237968.1, AB233218.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-11                BY237968.1         1-11
            12-825              BC050115.1         1-814
            826-830             AV119568.1         264-268
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 37.85 cM"
     gene            1..830
                     /gene="Rps19bp1"
                     /gene_synonym="2510038A11Rik; S19BP"
                     /note="ribosomal protein S19 binding protein 1"
                     /db_xref="GeneID:66538"
                     /db_xref="MGI:MGI:1913788"
     exon            1..80
                     /gene="Rps19bp1"
                     /gene_synonym="2510038A11Rik; S19BP"
                     /inference="alignment:Splign:2.1.0"
     exon            81..215
                     /gene="Rps19bp1"
                     /gene_synonym="2510038A11Rik; S19BP"
                     /inference="alignment:Splign:2.1.0"
     exon            216..313
                     /gene="Rps19bp1"
                     /gene_synonym="2510038A11Rik; S19BP"
                     /inference="alignment:Splign:2.1.0"
     exon            314..830
                     /gene="Rps19bp1"
                     /gene_synonym="2510038A11Rik; S19BP"
                     /inference="alignment:Splign:2.1.0"
     regulatory      804..809
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rps19bp1"
                     /gene_synonym="2510038A11Rik; S19BP"
                     /note="hexamer: AATAAA"
     polyA_site      825
                     /gene="Rps19bp1"
                     /gene_synonym="2510038A11Rik; S19BP"
                     /note="major polyA site"
ORIGIN      
        1 tcgccgcgtg tgggcggggc tcggaaacat gtcggcggcg ttagtgcggc gcggtttgga
       61 gcttctggcg gcgtccgagg ctccccgtgc ggtcccgggc caggtccagg ctagcgggac
      121 tccggcgaag cggacccgga gggcgcgggc caaggcctcc caggctctga aactgcggaa
      181 ctcagcgaag ggaaaggcgc ctaagtccgc tctagctgag taccagaaac ggcagtgtcg
      241 agaccacctc aaagcaaacc tgaagtttat gaccagcatg agaagcaccg tgccagagtc
      301 tgtgacccag cagatcctgc agcagaacca aggccgaaaa gcctgtgatc ggctagtggc
      361 caagacgaag aacaagaaga agaagaagaa gaaggctgag ggcactgtgt tcactgaaga
      421 agacttccag aagttccaga gggaatattt tggcagctag acttcctgga ggaatggtgg
      481 ggacaaaaga cactaaccct ccttggctgg acttctgctg tcctgggtcc ctgcagtgct
      541 gtgccacgag cgaccagcag gtggcagtgc aaaactagcc tggctcagga agccatatgc
      601 tgctatccca gggacactgg aacagagctg caagccctgc agcaaatttt ccctcaaact
      661 gaagtggact tctagtttgg cggaaccatc agcaccctgc cagaaaagat tctgacctgc
      721 cagctatgac caggattggt tatcagggct atttggtact gggcccactc agaccccacc
      781 tcaaggagct ggaaattcaa ataaataaat gtgagtttgg gcaaatgtgg
//
