LOCUS       NM_009092                489 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus ribosomal protein S17 (Rps17), mRNA.
ACCESSION   NM_009092
VERSION     NM_009092.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   3  (bases 1 to 489)
  AUTHORS   Luo,X.J., Deng,M., Xie,X., Huang,L., Wang,H., Jiang,L., Liang,G.,
            Hu,F., Tieu,R., Chen,R. and Gan,L.
  TITLE     GATA3 controls the specification of prosensory domain and neuronal
            survival in the mouse cochlea
  JOURNAL   Hum Mol Genet 22 (18), 3609-3623 (2013)
   PUBMED   23666531
REFERENCE   4  (bases 1 to 489)
  AUTHORS   Lumayag,S., Haldin,C.E., Corbett,N.J., Wahlin,K.J., Cowan,C.,
            Turturro,S., Larsen,P.E., Kovacs,B., Witmer,P.D., Valle,D.,
            Zack,D.J., Nicholson,D.A. and Xu,S.
  TITLE     Inactivation of the microRNA-183/96/182 cluster results in
            syndromic retinal degeneration
  JOURNAL   Proc Natl Acad Sci U S A 110 (6), E507-E516 (2013)
   PUBMED   23341629
REFERENCE   5  (bases 1 to 489)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
REFERENCE   6  (bases 1 to 489)
  AUTHORS   Trinidad,J.C., Specht,C.G., Thalhammer,A., Schoepfer,R. and
            Burlingame,A.L.
  TITLE     Comprehensive identification of phosphorylation sites in
            postsynaptic density preparations
  JOURNAL   Mol Cell Proteomics 5 (5), 914-922 (2006)
   PUBMED   16452087
REFERENCE   7  (bases 1 to 489)
  AUTHORS   Ballif,B.A., Villen,J., Beausoleil,S.A., Schwartz,D. and Gygi,S.P.
  TITLE     Phosphoproteomic analysis of the developing mouse brain
  JOURNAL   Mol Cell Proteomics 3 (11), 1093-1101 (2004)
   PUBMED   15345747
REFERENCE   8  (bases 1 to 489)
  AUTHORS   Wang,J., Yang,X., Zhou,P. and Han,H.
  TITLE     Cloning of mouse genomic ribosomal protein L6 gene and analysis of
            its promoter
  JOURNAL   Biochim Biophys Acta 1576 (1-2), 219-224 (2002)
   PUBMED   12031506
REFERENCE   9  (bases 1 to 489)
  AUTHORS   Karasaki,Y., Satoh,Y., Ohji,T., Tsukamoto,S., Higashi,K., Gotoh,S.
            and Mizusaki,K.
  TITLE     The nucleotide sequence of a cDNA clone encoding ribosomal protein
            S17 of Ehrlich ascites carcinoma cells
  JOURNAL   Biochem Genet 32 (11-12), 409-414 (1994)
   PUBMED   7748157
REFERENCE   10 (bases 1 to 489)
  AUTHORS   Varmuza,S. and Tate,P.
  TITLE     Isolation of epiblast-specific cDNA clones by differential
            hybridization with polymerase chain reaction-amplified probes
            derived from single embryos
  JOURNAL   Mol Reprod Dev 32 (4), 339-348 (1992)
   PUBMED   1497882
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK007992.1 and BC086900.1.
            
            On Mar 24, 2007 this sequence version replaced NM_009092.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086900.1, BU555953.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN02415128 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-467               AK007992.1         9-475
            468-489             BC086900.1         461-482
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 45.71 cM"
     gene            1..489
                     /gene="Rps17"
                     /note="ribosomal protein S17"
                     /db_xref="GeneID:20068"
                     /db_xref="MGI:MGI:1309526"
     exon            1..33
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..438
                     /gene="Rps17"
                     /note="40S ribosomal protein S17"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS17"
                     /protein_id="NP_033118.1"
                     /db_xref="CCDS:CCDS40006.1"
                     /db_xref="GeneID:20068"
                     /db_xref="MGI:MGI:1309526"
                     /translation="MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSK
                     KLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT
                     KEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV"
     exon            34..185
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
     exon            186..291
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
     exon            292..357
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
     exon            358..474
                     /gene="Rps17"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgtttcctc ttttaccgag acccgccaac atgggccgcg ttcgcaccaa gaccgtgaag
       61 aaggctgccc gggtcatcat cgagaagtac tacacgcgtc tgggtaatga cttccacacc
      121 aacaagcgcg tgtgcgagga gatcgccatt atccccagca agaagcttcg gaacaagata
      181 gccggctatg tcacgcatct gatgaagcgg attcagagag ggcctgtgag aggcatctct
      241 atcaagttgc aggaagaaga gagagagagg agagataact acgttcctga ggtctcagcc
      301 ctagatcagg agatcattga ggtggatccc gacaccaagg agatgctgaa gctcctggac
      361 tttggcagtc tctctaacct tcaggtcact cagcctacag ttggcatgaa tttcaaaaca
      421 ccacgtggag ctgtttaatc tgttatgcca tattttcaat aaacctgaaa acaaaaaaaa
      481 aaaaaaaaa
//
