LOCUS       NM_013725                602 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus ribosomal protein S11 (Rps11), mRNA.
ACCESSION   NM_013725
VERSION     NM_013725.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Zhou,J., Hamdan,H., Yalamanchili,H.K., Pang,K., Pohodich,A.E.,
            Lopez,J., Shao,Y., Oses-Prieto,J.A., Li,L., Kim,W., Durham,M.A.,
            Bajikar,S.S., Palmer,D.J., Ng,P., Thompson,M.L., Bebin,E.M.,
            Muller,A.J., Kuechler,A., Kampmeier,A., Haack,T.B.,
            Burlingame,A.L., Liu,Z., Rasband,M.N. and Zoghbi,H.Y.
  TITLE     Disruption of MeCP2-TCF20 complex underlies distinct
            neurodevelopmental disorders
  JOURNAL   Proc Natl Acad Sci U S A 119 (4) (2022)
   PUBMED   35074918
REFERENCE   3  (bases 1 to 602)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   4  (bases 1 to 602)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   5  (bases 1 to 602)
  AUTHORS   Hupe,M., Li,M.X., Gertow Gillner,K., Adams,R.H. and Stenman,J.M.
  TITLE     Evaluation of TRAP-sequencing technology with a versatile
            conditional mouse model
  JOURNAL   Nucleic Acids Res 42 (2), e14 (2014)
   PUBMED   24165879
REFERENCE   6  (bases 1 to 602)
  AUTHORS   Sansom,S.N., Griffiths,D.S., Faedo,A., Kleinjan,D.J., Ruan,Y.,
            Smith,J., van Heyningen,V., Rubenstein,J.L. and Livesey,F.J.
  TITLE     The level of the transcription factor Pax6 is essential for
            controlling the balance between neural stem cell self-renewal and
            neurogenesis
  JOURNAL   PLoS Genet 5 (6), e1000511 (2009)
   PUBMED   19521500
REFERENCE   7  (bases 1 to 602)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   8  (bases 1 to 602)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   9  (bases 1 to 602)
  AUTHORS   Higa,S., Yoshihama,M., Tanaka,T. and Kenmochi,N.
  TITLE     Gene organization and sequence of the region containing the
            ribosomal protein genes RPL13A and RPS11 in the human genome and
            conserved features in the mouse genome
  JOURNAL   Gene 240 (2), 371-377 (1999)
   PUBMED   10580157
REFERENCE   10 (bases 1 to 602)
  AUTHORS   Varmuza,S. and Tate,P.
  TITLE     Isolation of epiblast-specific cDNA clones by differential
            hybridization with polymerase chain reaction-amplified probes
            derived from single embryos
  JOURNAL   Mol Reprod Dev 32 (4), 339-348 (1992)
   PUBMED   1497882
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ044201.1 and AK150738.1.
            
            On Aug 15, 2009 this sequence version replaced NM_013725.3.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BU526435.1, CK788603.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849382, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-26                CJ044201.1         2-27
            27-602              AK150738.1         2-577
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 29.14 cM"
     gene            1..602
                     /gene="Rps11"
                     /note="ribosomal protein S11"
                     /db_xref="GeneID:27207"
                     /db_xref="MGI:MGI:1351329"
     exon            1..93
                     /gene="Rps11"
                     /inference="alignment:Splign:2.1.0"
     exon            94..225
                     /gene="Rps11"
                     /inference="alignment:Splign:2.1.0"
     exon            226..301
                     /gene="Rps11"
                     /inference="alignment:Splign:2.1.0"
     exon            302..431
                     /gene="Rps11"
                     /inference="alignment:Splign:2.1.0"
     exon            432..602
                     /gene="Rps11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acttccgccc cgacctcgcg tggtgaataa ggaagccggg agcggccctg cctctccctt
       61 tctccggcgg ccgggaagat ggcggacatt cagacggagc gtgcttacca aaagcagcct
      121 acgatctttc aaaacaagaa gcgggttctg ctgggagaaa ccggcaagga aaaactccct
      181 cggtactaca agaatatcgg tctaggcttc aagacgccta aagaggctat tgagggtacc
      241 tacatagaca agaaatgccc cttcactggt aacgtctcca tccgaggtcg gatcctgtct
      301 ggtgtcgtga cgaagatgaa gatgcagagg accattgtca tccgccggga ctatctccat
      361 tacatccgaa agtacaatcg ctttgagaag cgtcacaaga acatgtctgt gcacctgtcc
      421 ccctgtttca gggatgtaca gatcggagac attgtcacag ttggagagtg caggcccctg
      481 agcaagactg tgcgattcaa tgtgctcaag gtcaccaagg ctgctggcac caagaagcag
      541 tttcagaagt tctaagggga ctctggccaa tgccctagaa caaataaagt tattttccaa
      601 cg
//
