LOCUS       NM_001013376            1027 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus ribonuclease P/MRP 38 subunit (Rpp38), mRNA.
ACCESSION   NM_001013376 XM_130010
VERSION     NM_001013376.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Xiao,S., Scott,F., Fierke,C.A. and Engelke,D.R.
  TITLE     Eukaryotic ribonuclease P: a plurality of ribonucleoprotein enzymes
  JOURNAL   Annu Rev Biochem 71, 165-189 (2002)
   PUBMED   12045094
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732620.14.
            
            On Jul 2, 2009 this sequence version replaced NM_001013376.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC051448.1, AK087782.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-102               AL732620.14        43329-43430         c
            103-1027            AL732620.14        39751-40675         c
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 1.87 cM"
     gene            1..1027
                     /gene="Rpp38"
                     /gene_synonym="C330006A15Rik"
                     /note="ribonuclease P/MRP 38 subunit"
                     /db_xref="GeneID:227522"
                     /db_xref="MGI:MGI:2443607"
     exon            1..102
                     /gene="Rpp38"
                     /gene_synonym="C330006A15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            103..1027
                     /gene="Rpp38"
                     /gene_synonym="C330006A15Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             113..955
                     /gene="Rpp38"
                     /gene_synonym="C330006A15Rik"
                     /EC_number="3.1.26.5"
                     /note="RNaseP protein p38; ribonuclease P/MRP 38kDa
                     subunit"
                     /codon_start=1
                     /product="ribonuclease P protein subunit p38"
                     /protein_id="NP_001013394.2"
                     /db_xref="CCDS:CCDS15645.1"
                     /db_xref="GeneID:227522"
                     /db_xref="MGI:MGI:2443607"
                     /translation="MAAAPQAPKRGSIRKTRPLVVKTSLNNPYVISWSTLEREDIHFI
                     LQTLEAKFKLIGLQKIEDKKKRKKTALMKKQSCRPDIEISEDPKEPDGDVLVSGWTPV
                     HVRKQLVIGVNEVTRALERNELLLVLVCKSVKPAIITSHLIQLSLSRTVPACQVPQLS
                     ERIAPVIGLKCVLALGFRKNTRDFADEVEAIIPRVPSLNVPWLPDRTQGPTDSLETEP
                     SESQDNEILDTSFDDLTKLSKRKLAEGGQASAATLQPLKIKKLIPNPSKIRKPPKSKK
                     SISK"
     regulatory      1005..1010
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpp38"
                     /gene_synonym="C330006A15Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1027
                     /gene="Rpp38"
                     /gene_synonym="C330006A15Rik"
                     /note="major polyA site"
ORIGIN      
        1 agtgcaggcg cacgtggagc gggcgcagtg gttcctggta gtgaccgagt tgctgtagtg
       61 aagcgatccg tcacgtggtc tccgcggggc gcttctgctc agggttttca agatggctgc
      121 agcccctcag gcaccaaaga ggggatctat tcggaagact agacctctgg ttgtaaaaac
      181 atcactaaac aacccttatg ttatttcctg gagcaccttg gagagagaag acatacactt
      241 tatattacag actctcgaag ccaagtttaa attgattgga cttcagaaaa ttgaagataa
      301 gaagaaaagg aaaaaaacag ctcttatgaa aaagcaaagt tgccggccag atattgagat
      361 tagcgaggat ccaaaagagc ctgatgggga tgtgctggtg tcagggtgga cacctgtaca
      421 cgtcaggaaa cagctggtca ttggtgttaa tgaagtcacc agagctctgg agaggaatga
      481 actgctcctg gttctagtgt gtaagtcagt caagcctgcc atcatcacct cacacctgat
      541 tcagctgagt ctaagcagaa ctgttcctgc ctgtcaggta cctcagctca gcgagagaat
      601 tgctcctgtc attggcttaa aatgtgtgct agccttgggt ttcagaaaga acaccaggga
      661 ctttgctgat gaagtagaag ccatcattcc cagggtgccc agcttaaacg tgccatggct
      721 tccagacaga acccaaggtc ccacagacag tttagagact gaaccctcgg aaagccagga
      781 caacgagatt ttggacacgt catttgatga ccttacaaaa cttagtaaga ggaagcttgc
      841 tgaaggtgga caagcttcag ctgcaacatt acaacccctt aaaataaaaa agctcattcc
      901 caaccctagt aagataagaa aaccacccaa aagtaaaaag tccatttcca agtagttttg
      961 tatgacttgt cactatgtct aatgtctaaa tgagcactga aagaaataaa atcaaaactt
     1021 acatata
//
