LOCUS       NM_026020                457 bp    mRNA    linear   ROD 04-APR-2024
DEFINITION  Mus musculus ribosomal protein lateral stalk subunit P2 (Rplp2),
            transcript variant 1, mRNA.
ACCESSION   NM_026020
VERSION     NM_026020.7
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   3  (bases 1 to 457)
  AUTHORS   Vannella,K.M., Barron,L., Borthwick,L.A., Kindrachuk,K.N.,
            Narasimhan,P.B., Hart,K.M., Thompson,R.W., White,S., Cheever,A.W.,
            Ramalingam,T.R. and Wynn,T.A.
  TITLE     Incomplete deletion of IL-4Ralpha by LysM(Cre) reveals distinct
            subsets of M2 macrophages controlling inflammation and fibrosis in
            chronic schistosomiasis
  JOURNAL   PLoS Pathog 10 (9), e1004372 (2014)
   PUBMED   25211233
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 457)
  AUTHORS   Perucho,L., Artero-Castro,A., Guerrero,S., Ramon y Cajal,S.,
            LLeonart,M.E. and Wang,Z.Q.
  TITLE     RPLP1, a crucial ribosomal protein for embryonic development of the
            nervous system
  JOURNAL   PLoS One 9 (6), e99956 (2014)
   PUBMED   24959908
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 457)
  AUTHORS   Trinidad,J.C., Specht,C.G., Thalhammer,A., Schoepfer,R. and
            Burlingame,A.L.
  TITLE     Comprehensive identification of phosphorylation sites in
            postsynaptic density preparations
  JOURNAL   Mol Cell Proteomics 5 (5), 914-922 (2006)
   PUBMED   16452087
REFERENCE   6  (bases 1 to 457)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   7  (bases 1 to 457)
  AUTHORS   Shu,H., Chen,S., Bi,Q., Mumby,M. and Brekken,D.L.
  TITLE     Identification of phosphoproteins and their phosphorylation sites
            in the WEHI-231 B lymphoma cell line
  JOURNAL   Mol Cell Proteomics 3 (3), 279-286 (2004)
   PUBMED   14729942
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC158224.6.
            
            On Feb 8, 2018 this sequence version replaced NM_026020.6.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longer isoform (a). Variants 1 and 2
            both encode the same isoform (a).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BG085364.2, BG072570.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-57                AC158224.6         96880-96936
            58-181              AC158224.6         97137-97260
            182-230             AC158224.6         97955-98003
            231-329             AC158224.6         100233-100331
            330-457             AC158224.6         100461-100588
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 86.8 cM"
     gene            1..457
                     /gene="Rplp2"
                     /gene_synonym="2700049I22Rik"
                     /note="ribosomal protein lateral stalk subunit P2"
                     /db_xref="GeneID:67186"
                     /db_xref="MGI:MGI:1914436"
     exon            1..57
                     /gene="Rplp2"
                     /gene_synonym="2700049I22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            58..181
                     /gene="Rplp2"
                     /gene_synonym="2700049I22Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..406
                     /gene="Rplp2"
                     /gene_synonym="2700049I22Rik"
                     /note="isoform a is encoded by transcript variant 1; 60S
                     acidic ribosomal protein P2; large ribosomal subunit
                     protein P2; ribosomal protein, large P2"
                     /codon_start=1
                     /product="large ribosomal subunit protein P2 isoform a"
                     /protein_id="NP_080296.3"
                     /db_xref="CCDS:CCDS40187.1"
                     /db_xref="GeneID:67186"
                     /db_xref="MGI:MGI:1914436"
                     /translation="MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVIS
                     ELNGKNIEDVIAQGVGKLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEES
                     EESDDDMGFGLFD"
     exon            182..230
                     /gene="Rplp2"
                     /gene_synonym="2700049I22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            231..329
                     /gene="Rplp2"
                     /gene_synonym="2700049I22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            330..457
                     /gene="Rplp2"
                     /gene_synonym="2700049I22Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctttcgccgc cggacgccgc cgaggtcgca cgcgtgaggt ctgtcccccg cagccgacat
       61 gcgctacgtc gcctcttacc tgctggccgc cctcgggggc aactcctctc ctagcgccaa
      121 agacatcaag aaaatactag acagcgtggg catcgaagcg gacgatgatc ggctcaacaa
      181 ggtcatcagt gagctgaatg gaaagaacat tgaggatgtc atcgctcagg gtgttggcaa
      241 gctggccagt gtgcctgctg gtggggctgt ggctgtttct gctgcccctg gctctgcagc
      301 acctgctgct ggttctgccc ccgctgcagc agaggagaag aaagatgaga agaaggagga
      361 gtccgaggag tcggatgacg acatgggatt tggcttgttt gattaaattc ctgctcccct
      421 gcaaataaag tctttttatg tatcttgagt ggccttt
//
