LOCUS       NM_012053                862 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus ribosomal protein L8 (Rpl8), mRNA.
ACCESSION   NM_012053
VERSION     NM_012053.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 862)
  AUTHORS   Chern,T., Achilleos,A., Tong,X., Hill,M.C., Saltzman,A.B.,
            Reineke,L.C., Chaudhury,A., Dasgupta,S.K., Redhead,Y., Watkins,D.,
            Neilson,J.R., Thiagarajan,P., Green,J.B.A., Malovannaya,A.,
            Martin,J.F., Rosenblatt,D.S. and Poche,R.A.
  TITLE     Mutations in Hcfc1 and Ronin result in an inborn error of cobalamin
            metabolism and ribosomopathy
  JOURNAL   Nat Commun 13 (1), 134 (2022)
   PUBMED   35013307
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 862)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   4  (bases 1 to 862)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   5  (bases 1 to 862)
  AUTHORS   Bayes,A., Collins,M.O., Croning,M.D., van de Lagemaat,L.N.,
            Choudhary,J.S. and Grant,S.G.
  TITLE     Comparative study of human and mouse postsynaptic proteomes finds
            high compositional conservation and abundance differences for key
            synaptic proteins
  JOURNAL   PLoS One 7 (10), e46683 (2012)
   PUBMED   23071613
REFERENCE   6  (bases 1 to 862)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
REFERENCE   7  (bases 1 to 862)
  AUTHORS   Hara,Y., Onishi,Y., Oishi,K., Miyazaki,K., Fukamizu,A. and
            Ishida,N.
  TITLE     Molecular characterization of Mybbp1a as a co-repressor on the
            Period2 promoter
  JOURNAL   Nucleic Acids Res 37 (4), 1115-1126 (2009)
   PUBMED   19129230
REFERENCE   8  (bases 1 to 862)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   9  (bases 1 to 862)
  AUTHORS   Trinidad,J.C., Specht,C.G., Thalhammer,A., Schoepfer,R. and
            Burlingame,A.L.
  TITLE     Comprehensive identification of phosphorylation sites in
            postsynaptic density preparations
  JOURNAL   Mol Cell Proteomics 5 (5), 914-922 (2006)
   PUBMED   16452087
REFERENCE   10 (bases 1 to 862)
  AUTHORS   Abidari,J.M., Gonzales,E.T., Inoue,K., Lupski,J.R., Karsenty,G. and
            Katsanis,N.
  TITLE     Identification of novel genes expressed during metanephric
            induction through single-cell library screening
  JOURNAL   Kidney Int 57 (6), 2221-2228 (2000)
   PUBMED   10844592
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY107268.1, AK131970.1 and AV214072.1.
            
            On Aug 5, 2009 this sequence version replaced NM_012053.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK152063.1, AK131970.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-9                 BY107268.1         2-10
            10-855              AK131970.1         2-847
            856-862             AV214072.1         220-226
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 36.28 cM"
     gene            1..862
                     /gene="Rpl8"
                     /note="ribosomal protein L8"
                     /db_xref="GeneID:26961"
                     /db_xref="MGI:MGI:1350927"
     exon            1..39
                     /gene="Rpl8"
                     /inference="alignment:Splign:2.1.0"
     exon            40..187
                     /gene="Rpl8"
                     /inference="alignment:Splign:2.1.0"
     exon            188..329
                     /gene="Rpl8"
                     /inference="alignment:Splign:2.1.0"
     exon            330..548
                     /gene="Rpl8"
                     /inference="alignment:Splign:2.1.0"
     exon            549..664
                     /gene="Rpl8"
                     /inference="alignment:Splign:2.1.0"
     exon            665..862
                     /gene="Rpl8"
                     /inference="alignment:Splign:2.1.0"
     regulatory      836..841
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl8"
                     /note="hexamer: AATAAA"
     polyA_site      858
                     /gene="Rpl8"
                     /note="major polyA site"
ORIGIN      
        1 gacccgtcta tttcctcttt cggccttgct tgccggcaga ctcgccgcca tgggccgtgt
       61 gatccgaggg cagaggaaag gcgcgggttc tgttttccgt gcgcacgtga agcaccgtaa
      121 gggcgccgcg cgcctacgtg ctgtggactt cgcggagcga cacggctaca ttaaaggcat
      181 cgtaaaggac atcattcatg accctggccg cggcgctccc ctcgccaaag tcgtctttcg
      241 ggatccctac cgattcaaga agcggacaga gctgttcatc gcagcggagg ggatccacac
      301 tggacagttc gtgtactgcg gcaagaaggc ccagctgaat atcggcaatg ttttgcccgt
      361 gggcaccatg cctgagggta cgatcgtgtg ttgtctggag gagaaacctg gggacagggg
      421 caagctggcc cgagcctccg ggaactacgc cacagtcatc tcccacaacc cagagaccaa
      481 gaagactcga gtgaagctgc cttcggggtc caagaaggtc atttcctctg ccaacagagc
      541 cgttgttggt gttgtggctg gtgggggcag aattgacaag cctatcttaa aggctggccg
      601 tgcctaccac aagtacaagg caaagaggaa ctgctggcca cgtgtgcggg gtgtggccat
      661 gaatcctgtg gagcatccct ttggaggtgg taaccaccag cacattggca aaccctccac
      721 catccgaaga gatgcccctg ctgggcgcaa agtgggtctc attgctgccc gccggactgg
      781 acggctgcgt ggaaccaaaa ctgtacagga gaaggagaac tagagttcag gagctaataa
      841 agtacgtcct ttggctaatc cg
//
