LOCUS       NM_018860                459 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus ribosomal protein L41 (Rpl41), mRNA.
ACCESSION   NM_018860 XM_973912
VERSION     NM_018860.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Zhao,Q., Yan,S., Lu,J., Parker,D.J., Wu,H., Sun,Q., Crossman,D.K.,
            Liu,S., Wang,Q., Sesaki,H., Mitra,K., Liu,K. and Jiao,K.
  TITLE     Drp1 regulates transcription of ribosomal protein genes in
            embryonic hearts
  JOURNAL   J Cell Sci 135 (4) (2022)
   PUBMED   35099001
REFERENCE   3  (bases 1 to 459)
  AUTHORS   Geng,W., Qin,F., Ren,J., Xiao,S. and Wang,A.
  TITLE     Mini-peptide RPL41 attenuated retinal neovascularization by
            inducing degradation of ATF4 in oxygen-induced retinopathy mice
  JOURNAL   Exp Cell Res 369 (2), 243-250 (2018)
   PUBMED   29803741
REFERENCE   4  (bases 1 to 459)
  AUTHORS   Stafford,D.A., Dichmann,D.S., Chang,J.K. and Harland,R.M.
  TITLE     Deletion of the sclerotome-enriched lncRNA PEAT augments ribosomal
            protein expression
  JOURNAL   Proc Natl Acad Sci U S A 114 (1), 101-106 (2017)
   PUBMED   27986952
REFERENCE   5  (bases 1 to 459)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   6  (bases 1 to 459)
  AUTHORS   Wang,S.Z., Ou,J., Zhu,L.J. and Green,M.R.
  TITLE     Transcription factor ATF5 is required for terminal differentiation
            and survival of olfactory sensory neurons
  JOURNAL   Proc Natl Acad Sci U S A 109 (45), 18589-18594 (2012)
   PUBMED   23090999
REFERENCE   7  (bases 1 to 459)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
REFERENCE   8  (bases 1 to 459)
  AUTHORS   Kuo,B.Y., Chen,Y., Bohacec,S., Johansson,O., Wasserman,W.W. and
            Simpson,E.M.
  TITLE     SAGE2Splice: unmapped SAGE tags reveal novel splice junctions
  JOURNAL   PLoS Comput Biol 2 (4), e34 (2006)
   PUBMED   16683015
REFERENCE   9  (bases 1 to 459)
  AUTHORS   Lin,Q., Donahue,S.L., Moore-Jarrett,T., Cao,S., Osipovich,A.B. and
            Ruley,H.E.
  TITLE     Mutagenesis of diploid mammalian genes by gene entrapment
  JOURNAL   Nucleic Acids Res 34 (20), e139 (2006)
   PUBMED   17062627
REFERENCE   10 (bases 1 to 459)
  AUTHORS   Seo,K.W., Kon,Y. and Watanabe,T.
  TITLE     Embryonic hematopoiesis defect in the tattered-Hokkaido (Tdho)
            mouse
  JOURNAL   Comp Med 50 (1), 27-31 (2000)
   PUBMED   10987663
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU937034.1, AK160588.1 and AV478133.1.
            
            On Aug 4, 2009 this sequence version replaced NM_018860.3.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AV478133.1, CF729745.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164143, SAMN02415132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-54                BU937034.1         4-57
            55-433              AK160588.1         2-380
            434-459             AV478133.1         367-392
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 77.04 cM"
     gene            1..459
                     /gene="Rpl41"
                     /gene_synonym="1810055P16Rik; 2210411K19Rik"
                     /note="ribosomal protein L41"
                     /db_xref="GeneID:67945"
                     /db_xref="MGI:MGI:1915195"
     exon            1..81
                     /gene="Rpl41"
                     /gene_synonym="1810055P16Rik; 2210411K19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            82..106
                     /gene="Rpl41"
                     /gene_synonym="1810055P16Rik; 2210411K19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             95..172
                     /gene="Rpl41"
                     /gene_synonym="1810055P16Rik; 2210411K19Rik"
                     /note="60S ribosomal protein L41; large ribosomal subunit
                     protein eL41"
                     /codon_start=1
                     /product="small ribosomal subunit protein eS32"
                     /protein_id="NP_061348.1"
                     /db_xref="CCDS:CCDS56753.1"
                     /db_xref="GeneID:67945"
                     /db_xref="MGI:MGI:1915195"
                     /translation="MRAKWRKKRMRRLKRKRRKMRQRSK"
     exon            107..129
                     /gene="Rpl41"
                     /gene_synonym="1810055P16Rik; 2210411K19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            130..449
                     /gene="Rpl41"
                     /gene_synonym="1810055P16Rik; 2210411K19Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      344
                     /gene="Rpl41"
                     /gene_synonym="1810055P16Rik; 2210411K19Rik"
                     /note="major polyA site"
     regulatory      412..417
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl41"
                     /gene_synonym="1810055P16Rik; 2210411K19Rik"
                     /note="hexamer: AATAAA"
     polyA_site      449
                     /gene="Rpl41"
                     /gene_synonym="1810055P16Rik; 2210411K19Rik"
ORIGIN      
        1 ggaagtgacg acaccgagca cgccattaaa tagcagtagg cctccctctc cgccctctcg
       61 gtcttagcgc catcttcctt gagactcctg cgccatgaga gcgaagtggc ggaagaagag
      121 aatgcgcagg ctgaagcgca agagaagaaa gatgaggcag aggtccaagt aagccagccc
      181 gtgcacctac gacgcctgca ggagcagaag tgagggatgc tgagggccgg gacaagctat
      241 cggactgtgt gctgccatcg gtaatgagtc tcagtagacc tggaacgtca cctcgccgcg
      301 atcgcctgga gaaatgaccg cctttcttac aaccaaaaca gtccctctgc cctggacccc
      361 cggcactctg gactagctct gttctcttgt ggccaagtgt agctcgtgta caataaaccc
      421 tcttgcagtc agctgaagaa tcaaactgca aaaaaaaaa
//
