LOCUS       NM_009084                581 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus ribosomal protein L37a (Rpl37a), mRNA.
ACCESSION   NM_009084
VERSION     NM_009084.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 581)
  AUTHORS   Zhao,Q., Yan,S., Lu,J., Parker,D.J., Wu,H., Sun,Q., Crossman,D.K.,
            Liu,S., Wang,Q., Sesaki,H., Mitra,K., Liu,K. and Jiao,K.
  TITLE     Drp1 regulates transcription of ribosomal protein genes in
            embryonic hearts
  JOURNAL   J Cell Sci 135 (4) (2022)
   PUBMED   35099001
REFERENCE   3  (bases 1 to 581)
  AUTHORS   Nakagawa,T., Hattori,S., Nobuta,R., Kimura,R., Nakagawa,M.,
            Matsumoto,M., Nagasawa,Y., Funayama,R., Miyakawa,T., Inada,T.,
            Osumi,N., Nakayama,K.I. and Nakayama,K.
  TITLE     The Autism-Related Protein SETD5 Controls Neural Cell Proliferation
            through Epigenetic Regulation of rDNA Expression
  JOURNAL   iScience 23 (4), 101030 (2020)
   PUBMED   32299058
REFERENCE   4  (bases 1 to 581)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   5  (bases 1 to 581)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   6  (bases 1 to 581)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   7  (bases 1 to 581)
  AUTHORS   Nishimura,M., Yokoi,N., Miki,T., Horikawa,Y., Yoshioka,H.,
            Takeda,J., Ohara,O. and Seino,S.
  TITLE     Construction of a multi-functional cDNA library specific for mouse
            pancreatic islets and its application to microarray
  JOURNAL   DNA Res 11 (5), 315-323 (2004)
   PUBMED   15747579
REFERENCE   8  (bases 1 to 581)
  AUTHORS   Kozak,C.A., Su,Y., Raj,N.B. and Pitha,P.M.
  TITLE     Identification and genetic mapping of differentially expressed
            genes in mice differing at the If1 interferon regulatory locus
  JOURNAL   Mamm Genome 10 (9), 853-857 (1999)
   PUBMED   10441734
REFERENCE   9  (bases 1 to 581)
  AUTHORS   Ko,M.S., Threat,T.A., Wang,X., Horton,J.H., Cui,Y., Wang,X.,
            Pryor,E., Paris,J., Wells-Smith,J., Kitchen,J.R., Rowe,L.B.,
            Eppig,J., Satoh,T., Brant,L., Fujiwara,H., Yotsumoto,S. and
            Nakashima,H.
  TITLE     Genome-wide mapping of unselected transcripts from extraembryonic
            tissue of 7.5-day mouse embryos reveals enrichment in the t-complex
            and under-representation on the X chromosome
  JOURNAL   Hum Mol Genet 7 (12), 1967-1978 (1998)
   PUBMED   9811942
REFERENCE   10 (bases 1 to 581)
  AUTHORS   Su,Y., Raj,N.B., Au,W.C. and Pitha,P.M.
  TITLE     Primary sequence of the mouse ribosomal protein L37a
  JOURNAL   Nucleic Acids Res 21 (18), 4400 (1993)
   PUBMED   8415004
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC121498.12.
            
            On Jul 18, 2022 this sequence version replaced NM_009084.4.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CJ094116.1, AV463849.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-57                AC121498.12        118675-118731       c
            58-186              AC121498.12        118198-118326       c
            187-269             AC121498.12        117774-117856       c
            270-581             AC121498.12        116185-116496       c
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 36.87 cM"
     gene            1..581
                     /gene="Rpl37a"
                     /note="ribosomal protein L37a"
                     /db_xref="GeneID:19981"
                     /db_xref="MGI:MGI:98068"
     exon            1..57
                     /gene="Rpl37a"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..333
                     /gene="Rpl37a"
                     /note="60S ribosomal protein L37a"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL43"
                     /protein_id="NP_033110.1"
                     /db_xref="CCDS:CCDS35610.1"
                     /db_xref="GeneID:19981"
                     /db_xref="MGI:MGI:98068"
                     /translation="MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGK
                     TKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKDQ"
     exon            58..186
                     /gene="Rpl37a"
                     /inference="alignment:Splign:2.1.0"
     exon            187..269
                     /gene="Rpl37a"
                     /inference="alignment:Splign:2.1.0"
     exon            270..581
                     /gene="Rpl37a"
                     /inference="alignment:Splign:2.1.0"
     regulatory      417..422
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl37a"
                     /note="hexamer: ATTAAA"
     polyA_site      441
                     /gene="Rpl37a"
                     /note="major polyA site"
     regulatory      560..565
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl37a"
                     /note="hexamer: AATAAA"
     polyA_site      581
                     /gene="Rpl37a"
ORIGIN      
        1 gcgcatgcgc attgcgtccc ttcctcttcg gacttgggct tgggttccgg cgacatggct
       61 aaacgcacca agaaggtcgg catcgtcggc aagtacggga cccgctatgg tgcctccctc
      121 cggaaaatgg tgaagaaaat tgaaatcagc cagcacgcca agtacacttg ctccttctgt
      181 ggcaagacca agatgaagag acgagccgtc ggcatctggc actgtggttc ctgcatgaaa
      241 acagtggccg gtggggcctg gacctacaac accacctctg cagtcacagt gaagtctgcc
      301 atcagaagac tgaaggaact gaaagaccag tagaagccct gctgtctgag acttgcctag
      361 cctgcaataa acgggttatt tacgtaactt tttttttttt gccttgtttg tggttaatta
      421 aaacatttgg tgtgtgttct attttttatt ttcgaaagat gcttgttttg agacatactg
      481 tgtgaccctg gctggccttg agtgcctggt tctccttaca agtgtagata catctggctt
      541 aagattttag tctttcagaa ataaaaatgt tgctaagaca a
//
