LOCUS       NM_026069                839 bp    mRNA    linear   ROD 23-APR-2024
DEFINITION  Mus musculus ribosomal protein L37 (Rpl37), mRNA.
ACCESSION   NM_026069
VERSION     NM_026069.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Zhao,Q., Yan,S., Lu,J., Parker,D.J., Wu,H., Sun,Q., Crossman,D.K.,
            Liu,S., Wang,Q., Sesaki,H., Mitra,K., Liu,K. and Jiao,K.
  TITLE     Drp1 regulates transcription of ribosomal protein genes in
            embryonic hearts
  JOURNAL   J Cell Sci 135 (4) (2022)
   PUBMED   35099001
REFERENCE   3  (bases 1 to 839)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   4  (bases 1 to 839)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
REFERENCE   5  (bases 1 to 839)
  AUTHORS   Trinidad,J.C., Specht,C.G., Thalhammer,A., Schoepfer,R. and
            Burlingame,A.L.
  TITLE     Comprehensive identification of phosphorylation sites in
            postsynaptic density preparations
  JOURNAL   Mol Cell Proteomics 5 (5), 914-922 (2006)
   PUBMED   16452087
REFERENCE   6  (bases 1 to 839)
  AUTHORS   Huttenhofer,A., Kiefmann,M., Meier-Ewert,S., O'Brien,J.,
            Lehrach,H., Bachellerie,J.P. and Brosius,J.
  TITLE     RNomics: an experimental approach that identifies 201 candidates
            for novel, small, non-messenger RNAs in mouse
  JOURNAL   EMBO J 20 (11), 2943-2953 (2001)
   PUBMED   11387227
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC135079.9.
            
            On Jul 8, 2022 this sequence version replaced NM_026069.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK014003.1, BY710461.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-40                AC135079.9         153706-153745       c
            41-176              AC135079.9         152968-153103       c
            177-261             AC135079.9         152687-152771       c
            262-839             AC135079.9         151246-151823       c
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 1.99 cM"
     gene            1..839
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /note="ribosomal protein L37"
                     /db_xref="GeneID:67281"
                     /db_xref="MGI:MGI:1914531"
     exon            1..40
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             38..331
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /note="60S ribosomal protein L37"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL37"
                     /protein_id="NP_080345.1"
                     /db_xref="CCDS:CCDS37027.1"
                     /db_xref="GeneID:67281"
                     /db_xref="MGI:MGI:1914531"
                     /translation="MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRK
                     RKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAASSSS"
     exon            41..176
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            177..261
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            262..839
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      351..356
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /note="hexamer: AATAAA"
     polyA_site      376
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /note="major polyA site"
     polyA_site      422
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
     polyA_site      436
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
     regulatory      732..737
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /note="hexamer: AATAAA"
     polyA_site      764
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
     regulatory      811..816
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      839
                     /gene="Rpl37"
                     /gene_synonym="3110005M08Rik"
ORIGIN      
        1 ctcttccggt ctctttggcc tcgccggtag aagcaagatg acgaagggaa cgtcatcctt
       61 tggtaagcgt cgcaacaaga cgcacacgct gtgccgccgc tgtggctcca aggcctacca
      121 ccttcagaag tcgacttgtg gcaagtgtgg ctaccctgcc aagcgcaaga ggaagtataa
      181 ctggagtgcc aaggctaaga gacgaaacac taccgggact ggtcggatga ggcacctaaa
      241 gattgtctac cgcagattca gacatggatt ccgtgaggga acaacgccga aacccaagag
      301 ggcagctgtc gcagcatcca gttcttctta aggatttcaa tcagtcataa aataaatgtt
      361 ctgctttcaa aaattctgtg gtgatctaag gtactttaac atcggttcag agttcggtta
      421 tatgattgct ctgggatcct acgcttcttc cttcatagtt cctgtgggtc cgaagctggg
      481 aggggctggg tggactctcg ggaaagatac tctgagcctg tctcggtccc catcgtgttt
      541 gcttggccct gggcatggaa gtgggtgagt gatgagctga acgagcaggc ttgctagaga
      601 tgaggacagt tactggtgtg gttatatcac taccatgcct acagtgtctt aagacgctta
      661 cagtctgtaa gggacttaaa tgatttgagc tcttacttat cctgtagttt ctgattttta
      721 acatttactt gaataaagcc aagcaagata agcctttatt cccagcactt ggtgacaggt
      781 ggatctatga gttggggatc agagctacac attaaaactc ttaattcatc ttactagaa
//
