LOCUS       NM_025592                452 bp    mRNA    linear   ROD 19-NOV-2024
DEFINITION  Mus musculus ribosomal protein L35 (Rpl35), mRNA.
ACCESSION   NM_025592
VERSION     NM_025592.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Iyyappan,R., Aleshkina,D., Ming,H., Dvoran,M., Kakavand,K.,
            Jansova,D., Del Llano,E., Gahurova,L., Bruce,A.W., Masek,T.,
            Pospisek,M., Horvat,F., Kubelka,M., Jiang,Z. and Susor,A.
  TITLE     The translational oscillation in oocyte and early embryo
            development
  JOURNAL   Nucleic Acids Res 51 (22), 12076-12091 (2023)
   PUBMED   37950888
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   3  (bases 1 to 452)
  AUTHORS   Zhao,Q., Yan,S., Lu,J., Parker,D.J., Wu,H., Sun,Q., Crossman,D.K.,
            Liu,S., Wang,Q., Sesaki,H., Mitra,K., Liu,K. and Jiao,K.
  TITLE     Drp1 regulates transcription of ribosomal protein genes in
            embryonic hearts
  JOURNAL   J Cell Sci 135 (4) (2022)
   PUBMED   35099001
REFERENCE   4  (bases 1 to 452)
  AUTHORS   Mattebo,A., Sen,T., Jassinskaja,M., Pimkova,K., Prieto
            Gonzalez-Albo,I., Alattar,A.G., Ramakrishnan,R., Lang,S., Jaras,M.,
            Hansson,J., Soneji,S., Singbrant,S., van den Akker,E. and
            Flygare,J.
  TITLE     Yippee like 4 (Ypel4) is essential for normal mouse red blood cell
            membrane integrity
  JOURNAL   Sci Rep 11 (1), 15898 (2021)
   PUBMED   34354145
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 452)
  AUTHORS   Rong,Y., Ji,S.Y., Zhu,Y.Z., Wu,Y.W., Shen,L. and Fan,H.Y.
  TITLE     ZAR1 and ZAR2 are required for oocyte meiotic maturation by
            regulating the maternal transcriptome and mRNA translational
            activation
  JOURNAL   Nucleic Acids Res 47 (21), 11387-11402 (2019)
   PUBMED   31598710
REFERENCE   6  (bases 1 to 452)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   7  (bases 1 to 452)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   8  (bases 1 to 452)
  AUTHORS   Favor,J., Bradley,A., Conte,N., Janik,D., Pretsch,W., Reitmeir,P.,
            Rosemann,M., Schmahl,W., Wienberg,J. and Zaus,I.
  TITLE     Analysis of Pax6 contiguous gene deletions in the mouse, Mus
            musculus, identifies regions distinct from Pax6 responsible for
            extreme small-eye and belly-spotting phenotypes
  JOURNAL   Genetics 182 (4), 1077-1088 (2009)
   PUBMED   19474196
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK010639.2.
            
            On Apr 6, 2007 this sequence version replaced NM_025592.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK010639.2, AV449777.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN01164137
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-452               AK010639.2         2-453
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 24.42 cM"
     gene            1..452
                     /gene="Rpl35"
                     /gene_synonym="2410039E09Rik"
                     /note="ribosomal protein L35"
                     /db_xref="GeneID:66489"
                     /db_xref="MGI:MGI:1913739"
     exon            1..48
                     /gene="Rpl35"
                     /gene_synonym="2410039E09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..417
                     /gene="Rpl35"
                     /gene_synonym="2410039E09Rik"
                     /note="60S ribosomal protein L35"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL29"
                     /protein_id="NP_079868.1"
                     /db_xref="CCDS:CCDS16015.1"
                     /db_xref="GeneID:66489"
                     /db_xref="MGI:MGI:1913739"
                     /translation="MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKL
                     SKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKL
                     KTKKQQRKERLYPLRKYAVKA"
     exon            49..185
                     /gene="Rpl35"
                     /gene_synonym="2410039E09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            186..267
                     /gene="Rpl35"
                     /gene_synonym="2410039E09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            268..452
                     /gene="Rpl35"
                     /gene_synonym="2410039E09Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      452
                     /gene="Rpl35"
                     /gene_synonym="2410039E09Rik"
                     /note="putative"
ORIGIN      
        1 ctctttctct cgaaccaggc tgcttcagcc gtgaacaacg ccgaaatggc caagattaag
       61 gctcgggacc tgcgcggcaa gaagaaggag gagctgttga aacaactgga cgatctgaag
      121 gtggaattgt cccagcttcg ggtcgccaaa gtgacaggcg gcgccgcgtc caagctctcc
      181 aagatacgag tcgttcgcaa gtctatcgcc cgagtcctca ctgttattaa ccagactcaa
      241 aaagaaaacc tcaggaaatt ctacaagggc aagaaataca agcccctaga cctgcgaccc
      301 aagaagacta gagccatgcg ccgccggctc accaagcacg aggagaagct gaagaccaag
      361 aagcagcagc ggaaggagcg gctgtatcct ctgcgcaagt atgcagtcaa ggcctgagat
      421 gacaacgaca ataaagtgcg agactgactg gc
//
