LOCUS       NM_001005859             492 bp    mRNA    linear   ROD 04-APR-2024
DEFINITION  Mus musculus ribosomal protein L34 (Rpl34), transcript variant 2,
            mRNA.
ACCESSION   NM_001005859 XM_006501975 XM_357642
VERSION     NM_001005859.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 492)
  AUTHORS   Jiang,X., Cheng,Y., Zhu,Y., Xu,C., Li,Q., Xing,X., Li,W., Zou,J.,
            Meng,L., Azhar,M., Cao,Y., Tong,X., Qin,W., Zhu,X. and Bao,J.
  TITLE     Maternal NAT10 orchestrates oocyte meiotic cell-cycle progression
            and maturation in mice
  JOURNAL   Nat Commun 14 (1), 3729 (2023)
   PUBMED   37349316
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 492)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   3  (bases 1 to 492)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 492)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   5  (bases 1 to 492)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   6  (bases 1 to 492)
  AUTHORS   Bayes,A., Collins,M.O., Croning,M.D., van de Lagemaat,L.N.,
            Choudhary,J.S. and Grant,S.G.
  TITLE     Comparative study of human and mouse postsynaptic proteomes finds
            high compositional conservation and abundance differences for key
            synaptic proteins
  JOURNAL   PLoS One 7 (10), e46683 (2012)
   PUBMED   23071613
REFERENCE   7  (bases 1 to 492)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154993.9, AK003177.1 and CJ041925.1.
            
            [WARNING] On Apr 6, 2024 this sequence was replaced by
            NM_001005859.4.
            
            On or before Jan 5, 2014 this sequence version replaced
            XM_006501975.1, NM_001005859.2.
            
            Transcript Variant: This variant (2) differs in the 5' UTR,
            compared to variant 1. Variants 1, 2, and 3 encode the same
            protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BQ740264.1, CJ041925.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-64                AC154993.9         80903-80966
            65-481              AK003177.1         2-418
            482-492             CJ041925.1         426-436
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 60.55 cM"
     gene            1..492
                     /gene="Rpl34"
                     /gene_synonym="1100001I22Rik"
                     /note="ribosomal protein L34"
                     /db_xref="GeneID:68436"
                     /db_xref="MGI:MGI:1915686"
     exon            1..81
                     /gene="Rpl34"
                     /gene_synonym="1100001I22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            82..155
                     /gene="Rpl34"
                     /gene_synonym="1100001I22Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             91..444
                     /gene="Rpl34"
                     /gene_synonym="1100001I22Rik"
                     /note="60S ribosomal protein L34"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL34"
                     /protein_id="NP_001005859.1"
                     /db_xref="CCDS:CCDS17841.1"
                     /db_xref="GeneID:68436"
                     /db_xref="MGI:MGI:1915686"
                     /translation="MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKS
                     ACGVCPGRLRGVRAVRPKVLMRLSKTQKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKI
                     VVKVLKAQAQSQKAK"
     exon            156..255
                     /gene="Rpl34"
                     /gene_synonym="1100001I22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            256..359
                     /gene="Rpl34"
                     /gene_synonym="1100001I22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            360..492
                     /gene="Rpl34"
                     /gene_synonym="1100001I22Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acttcctgtc cggcgccgtc acacttgacc cctgaactca cccgcccctt ccttttcctc
       61 ttccggggac ggtgctcaga ggcactcagg atggtccagc gtttgacata ccgccgtagg
      121 ctttcctaca acacagcctc taacaaaact aggctgtctc gaacccctgg caacaggatt
      181 gtttacctct acaccaagaa ggttgggaaa gcacctaaat ctgcatgtgg cgtgtgccca
      241 ggcagacttc gaggggttcg tgctgtgcgg cccaaagtcc ttatgagact gtctaagaca
      301 cagaagcacg tcagcagggc ctatggcggc tccatgtgtg ccaagtgtgt ccgtgacagg
      361 atcaagcggg ctttccttat tgaggagcag aaaatcgttg tgaaagtctt gaaggcacaa
      421 gcacagagtc agaaagcaaa atagatatgc acatttttta agtaataaaa atcaagactt
      481 gatctacgct tc
//
