LOCUS       NM_009083                614 bp    mRNA    linear   ROD 13-JUN-2024
DEFINITION  Mus musculus ribosomal protein L30 (Rpl30), transcript variant 1,
            mRNA.
ACCESSION   NM_009083 XM_289917
VERSION     NM_009083.5
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Nakagawa,T., Hattori,S., Nobuta,R., Kimura,R., Nakagawa,M.,
            Matsumoto,M., Nagasawa,Y., Funayama,R., Miyakawa,T., Inada,T.,
            Osumi,N., Nakayama,K.I. and Nakayama,K.
  TITLE     The Autism-Related Protein SETD5 Controls Neural Cell Proliferation
            through Epigenetic Regulation of rDNA Expression
  JOURNAL   iScience 23 (4), 101030 (2020)
   PUBMED   32299058
REFERENCE   3  (bases 1 to 614)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   4  (bases 1 to 614)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   5  (bases 1 to 614)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
REFERENCE   6  (bases 1 to 614)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
REFERENCE   7  (bases 1 to 614)
  AUTHORS   Feo,S., Davies,B. and Fried,M.
  TITLE     The mapping of seven intron-containing ribosomal protein genes
            shows they are unlinked in the human genome
  JOURNAL   Genomics 13 (1), 201-207 (1992)
   PUBMED   1577483
REFERENCE   8  (bases 1 to 614)
  AUTHORS   Wiedemann,L.M., D'Eustachio,P., Kelley,D.E. and Perry,R.P.
  TITLE     Three functional ribosomal protein genes are unlinked in mouse
            genome
  JOURNAL   Somat Cell Mol Genet 13 (1), 77-80 (1987)
   PUBMED   3468635
REFERENCE   9  (bases 1 to 614)
  AUTHORS   Wiedemann,L.M. and Perry,R.P.
  TITLE     Characterization of the expressed gene and several processed
            pseudogenes for the mouse ribosomal protein L30 gene family
  JOURNAL   Mol Cell Biol 4 (11), 2518-2528 (1984)
   PUBMED   6513928
REFERENCE   10 (bases 1 to 614)
  AUTHORS   D'Eustachio,P., Meyuhas,O., Ruddle,F. and Perry,R.P.
  TITLE     Chromosomal distribution of ribosomal protein genes in the mouse
  JOURNAL   Cell 24 (2), 307-312 (1981)
   PUBMED   7237550
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC126028.4.
            
            On Jul 8, 2022 this sequence version replaced NM_009083.4.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AV501328.1, AV467326.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-235               AC126028.4         84453-84687
            236-381             AC126028.4         84932-85077
            382-512             AC126028.4         86350-86480
            513-614             AC126028.4         87108-87209
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 14.33 cM"
     gene            1..614
                     /gene="Rpl30"
                     /note="ribosomal protein L30"
                     /db_xref="GeneID:19946"
                     /db_xref="MGI:MGI:98037"
     exon            1..235
                     /gene="Rpl30"
                     /inference="alignment:Splign:2.1.0"
     exon            236..381
                     /gene="Rpl30"
                     /inference="alignment:Splign:2.1.0"
     exon            382..512
                     /gene="Rpl30"
                     /inference="alignment:Splign:2.1.0"
     exon            513..614
                     /gene="Rpl30"
                     /inference="alignment:Splign:2.1.0"
     regulatory      581..586
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl30"
                     /note="hexamer: AATAAA"
     polyA_site      614
                     /gene="Rpl30"
                     /note="major polyA site"
ORIGIN      
        1 gtcggcctag aagagctttg cattgtggga gctccttcct ttctcgctcc ccggccatct
       61 tggcggctgg tgttggtgag tgagctctgc ggggtaaacg attaggcggc tcggggagct
      121 ccgctagctg gtgtttgacg ctctggatta taatcctctc ttctgtcctc tgtgtatgct
      181 aggttggggg ttgtcccgca cctaaggcag gaagatggtg gccgcaaaga agacgaaaaa
      241 gtctctggag tcgatcaact ctaggctcca acttgttatg aaaagtggga agtacgtgct
      301 gggctacaag cagactctga agatgatcag acaaggcaaa gcgaagttgg ttatccttgc
      361 caacaactgt ccagctttga ggaaatctga aatagagtac tatgccatgt tggctaaaac
      421 tggggtccat cactacagtg gcaataatat tgaactgggc acagcgtgtg gaaaatacta
      481 cagagtatgc acactggcta tcattgaccc aggtgattct gatattatta gaagcatgcc
      541 agaacagact ggtgagaagt aaacaagaaa gttttccttt aataaaactt tgccagagct
      601 ccttttgaaa aaca
//
