LOCUS       NM_009081                496 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus ribosomal protein L28 (Rpl28), mRNA.
ACCESSION   NM_009081
VERSION     NM_009081.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Zhao,Q., Yan,S., Lu,J., Parker,D.J., Wu,H., Sun,Q., Crossman,D.K.,
            Liu,S., Wang,Q., Sesaki,H., Mitra,K., Liu,K. and Jiao,K.
  TITLE     Drp1 regulates transcription of ribosomal protein genes in
            embryonic hearts
  JOURNAL   J Cell Sci 135 (4) (2022)
   PUBMED   35099001
REFERENCE   3  (bases 1 to 496)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   4  (bases 1 to 496)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   5  (bases 1 to 496)
  AUTHORS   Finch,A.J., Hilcenko,C., Basse,N., Drynan,L.F., Goyenechea,B.,
            Menne,T.F., Gonzalez Fernandez,A., Simpson,P., D'Santos,C.S.,
            Arends,M.J., Donadieu,J., Bellanne-Chantelot,C., Costanzo,M.,
            Boone,C., McKenzie,A.N., Freund,S.M. and Warren,A.J.
  TITLE     Uncoupling of GTP hydrolysis from eIF6 release on the ribosome
            causes Shwachman-Diamond syndrome
  JOURNAL   Genes Dev 25 (9), 917-929 (2011)
   PUBMED   21536732
REFERENCE   6  (bases 1 to 496)
  AUTHORS   Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W.
            and Richardson,P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev Dyn 225 (4), 384-391 (2002)
   PUBMED   12454917
REFERENCE   7  (bases 1 to 496)
  AUTHORS   Ito,M., Yuan,C.X., Okano,H.J., Darnell,R.B. and Roeder,R.G.
  TITLE     Involvement of the TRAP220 component of the TRAP/SMCC coactivator
            complex in embryonic development and thyroid hormone action
  JOURNAL   Mol Cell 5 (4), 683-693 (2000)
   PUBMED   10882104
REFERENCE   8  (bases 1 to 496)
  AUTHORS   Ko,M.S., Threat,T.A., Wang,X., Horton,J.H., Cui,Y., Wang,X.,
            Pryor,E., Paris,J., Wells-Smith,J., Kitchen,J.R., Rowe,L.B.,
            Eppig,J., Satoh,T., Brant,L., Fujiwara,H., Yotsumoto,S. and
            Nakashima,H.
  TITLE     Genome-wide mapping of unselected transcripts from extraembryonic
            tissue of 7.5-day mouse embryos reveals enrichment in the t-complex
            and under-representation on the X chromosome
  JOURNAL   Hum Mol Genet 7 (12), 1967-1978 (1998)
   PUBMED   9811942
REFERENCE   9  (bases 1 to 496)
  AUTHORS   Kubagawa,H., Burrows,P.D. and Cooper,M.D.
  TITLE     A novel pair of immunoglobulin-like receptors expressed by B cells
            and myeloid cells
  JOURNAL   Proc Natl Acad Sci U S A 94 (10), 5261-5266 (1997)
   PUBMED   9144225
REFERENCE   10 (bases 1 to 496)
  AUTHORS   Burke,P.S., Lium,E., Lin,C.S. and Wolgemuth,D.J.
  TITLE     Sequence and expression of a cDNA encoding the mouse homologue of
            the rat ribosomal protein L28
  JOURNAL   Gene 142 (2), 315-316 (1994)
   PUBMED   7515017
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK012368.1.
            
            On Sep 20, 2006 this sequence version replaced NM_009081.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC092012.1, AK012368.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-496               AK012368.1         2-497
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 2.77 cM"
     gene            1..496
                     /gene="Rpl28"
                     /gene_synonym="D7Wsu21e"
                     /note="ribosomal protein L28"
                     /db_xref="GeneID:19943"
                     /db_xref="MGI:MGI:101839"
     exon            1..34
                     /gene="Rpl28"
                     /gene_synonym="D7Wsu21e"
                     /inference="alignment:Splign:2.1.0"
     exon            35..123
                     /gene="Rpl28"
                     /gene_synonym="D7Wsu21e"
                     /inference="alignment:Splign:2.1.0"
     CDS             43..456
                     /gene="Rpl28"
                     /gene_synonym="D7Wsu21e"
                     /EC_number="3.6.5.3"
                     /note="60S ribosomal protein L28"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL28"
                     /protein_id="NP_033107.1"
                     /db_xref="CCDS:CCDS39742.1"
                     /db_xref="GeneID:19943"
                     /db_xref="MGI:MGI:101839"
                     /translation="MSAHLQWMVVRNCSSFLIKRNKQTYSTEPNNLKARNSFRYNGLI
                     HRKTVGVEPAADGKGVVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKY
                     RPDLRMAAIRRASAILRSQKPVVVKRKRTRPTKSS"
     exon            124..247
                     /gene="Rpl28"
                     /gene_synonym="D7Wsu21e"
                     /inference="alignment:Splign:2.1.0"
     exon            248..366
                     /gene="Rpl28"
                     /gene_synonym="D7Wsu21e"
                     /inference="alignment:Splign:2.1.0"
     exon            367..496
                     /gene="Rpl28"
                     /gene_synonym="D7Wsu21e"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      496
                     /gene="Rpl28"
                     /gene_synonym="D7Wsu21e"
                     /note="putative"
ORIGIN      
        1 ctctttccgt ctccggccgc catagggaga ggagccgccg ccatgtccgc gcatctgcag
       61 tggatggtcg tccggaactg ctccagtttc ttgatcaaga ggaataagca gacgtacagc
      121 acggagccaa ataatctgaa agcccgaaac tccttccgct acaacgggct aattcaccgc
      181 aagaccgtcg gagtggagcc ggccgccgat ggcaaagggg tcgtggtagt tatgaaacgc
      241 agatccggtc agcgaaaacc tgccacttct tatgtgagga ccaccatcaa caagaatgct
      301 cgggctaccc tcagcagcat cagacacatg atccgaaaga acaagtaccg ccctgatctg
      361 cgtatggcgg ccatccgcag ggccagtgcc atccttcgaa gccagaagcc tgtggtggtg
      421 aagaggaaac ggacccgccc caccaagagc tcctgagccc cacacgcccg aagcaataaa
      481 gagtccactg acttcc
//
