LOCUS       NM_009078                761 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus ribosomal protein L19 (Rpl19), transcript variant 1,
            mRNA.
ACCESSION   NM_009078
VERSION     NM_009078.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   3  (bases 1 to 761)
  AUTHORS   Sugihara,Y., Sadohara,E., Yonezawa,K., Kugo,M., Oshima,K.,
            Matsuda,T. and Nadano,D.
  TITLE     Identification and expression of an autosomal paralogue of
            ribosomal protein S4, X-linked, in mice: potential involvement of
            testis-specific ribosomal proteins in translation and
            spermatogenesis
  JOURNAL   Gene 521 (1), 91-99 (2013)
   PUBMED   23500592
REFERENCE   4  (bases 1 to 761)
  AUTHORS   Su,Y.Q., Sugiura,K., Sun,F., Pendola,J.K., Cox,G.A., Handel,M.A.,
            Schimenti,J.C. and Eppig,J.J.
  TITLE     MARF1 regulates essential oogenic processes in mice
  JOURNAL   Science 335 (6075), 1496-1499 (2012)
   PUBMED   22442484
REFERENCE   5  (bases 1 to 761)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
REFERENCE   6  (bases 1 to 761)
  AUTHORS   Smith,S.E., French,M.M., Julian,J., Paria,B.C., Dey,S.K. and
            Carson,D.D.
  TITLE     Expression of heparan sulfate proteoglycan (perlecan) in the mouse
            blastocyst is regulated during normal and delayed implantation
  JOURNAL   Dev Biol 184 (1), 38-47 (1997)
   PUBMED   9142982
REFERENCE   7  (bases 1 to 761)
  AUTHORS   Hou,Q. and Gorski,J.
  TITLE     Estrogen receptor and progesterone receptor genes are expressed
            differentially in mouse embryos during preimplantation development
  JOURNAL   Proc Natl Acad Sci U S A 90 (20), 9460-9464 (1993)
   PUBMED   8415723
REFERENCE   8  (bases 1 to 761)
  AUTHORS   Nakamura,T., Onno,M., Mariage-Samson,R., Hillova,J. and Hill,M.
  TITLE     Nucleotide sequence of mouse L19 ribosomal protein cDNA isolated in
            screening with tre oncogene probes
  JOURNAL   DNA Cell Biol 9 (10), 697-703 (1990)
   PUBMED   1702292
REFERENCE   9  (bases 1 to 761)
  AUTHORS   D'Eustachio,P., Meyuhas,O., Ruddle,F. and Perry,R.P.
  TITLE     Chromosomal distribution of ribosomal protein genes in the mouse
  JOURNAL   Cell 24 (2), 307-312 (1981)
   PUBMED   7237550
REFERENCE   10 (bases 1 to 761)
  AUTHORS   Meyuhas,O. and Perry,R.P.
  TITLE     Construction and identification of cDNA clones for mouse ribosomal
            proteins: application for the study of r-protein gene expression
  JOURNAL   Gene 10 (2), 113-129 (1980)
   PUBMED   6993285
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU524941.1, BC089549.1 and AV467392.1.
            
            On Apr 18, 2009 this sequence version replaced NM_009078.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BI107809.1, BU524941.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-33                BU524941.1         3-35
            34-736              BC089549.1         1-703
            737-761             AV467392.1         365-389
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 61.56 cM"
     gene            1..761
                     /gene="Rpl19"
                     /note="ribosomal protein L19"
                     /db_xref="GeneID:19921"
                     /db_xref="MGI:MGI:98020"
     exon            1..67
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..653
                     /gene="Rpl19"
                     /EC_number="6.3.5.5"
                     /note="isoform 1 is encoded by transcript variant 1; 60S
                     ribosomal protein L19; large ribosomal subunit protein
                     eL19"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL19 isoform 1"
                     /protein_id="NP_033104.2"
                     /db_xref="CCDS:CCDS25337.1"
                     /db_xref="GeneID:19921"
                     /db_xref="MGI:MGI:98020"
                     /translation="MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKL
                     IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL
                     RRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAE
                     ARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK"
     exon            68..174
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     exon            175..297
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     exon            298..418
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     exon            419..529
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     exon            530..752
                     /gene="Rpl19"
                     /inference="alignment:Splign:2.1.0"
     regulatory      719..724
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl19"
                     /note="hexamer: AACAAG"
     polyA_site      737
                     /gene="Rpl19"
                     /note="major polyA site"
ORIGIN      
        1 gcagataatg ggcggagcct gcggcccaca agctctttcc tttcgctgct gcggccgcag
       61 ccatgagtat gctcaggcta cagaagaggc ttgcctctag tgtcctccgc tgcgggaaaa
      121 agaaggtctg gttggatccc aatgagacca atgaaatcgc caatgccaac tcccgtcagc
      181 agatcaggaa gctgatcaag gatgggctga tcatccgcaa gcctgtgact gtccattccc
      241 gggctcgttg ccggaaaaac accctggccc gacggaaggg caggcatatg ggcataggga
      301 agaggaaggg tactgccaat gctcggatgc ctgagaaggt gacctggatg agaaggatga
      361 ggatcctgcg ccggcttctc aggagatacc gggaatccaa gaagattgac cgccatatgt
      421 atcacagcct gtacctgaag gtcaaaggga atgtgttcaa aaacaagcgc atcctcatgg
      481 agcacatcca caagctgaag gcagacaagg cccgcaagaa gctcctggct gaccaggctg
      541 aggctcgcag gtctaagacc aaggaagcac gaaagcgccg ggaggagcgc ctccaggcca
      601 agaaggaaga gatcatcaag actctgtcca aggaggagga gaccaagaaa taaagcttcc
      661 ctcgtgtctg tacatagcgg cctggctgtg gcctcatgtg gatcagtctt taaaataaaa
      721 caagcctttg tctgttgccc tcttgtttag caaaaaaaaa a
//
