LOCUS       NM_025974                944 bp    mRNA    linear   ROD 13-JUN-2024
DEFINITION  Mus musculus ribosomal protein L14 (Rpl14), mRNA.
ACCESSION   NM_025974
VERSION     NM_025974.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Jiang,X., Cheng,Y., Zhu,Y., Xu,C., Li,Q., Xing,X., Li,W., Zou,J.,
            Meng,L., Azhar,M., Cao,Y., Tong,X., Qin,W., Zhu,X. and Bao,J.
  TITLE     Maternal NAT10 orchestrates oocyte meiotic cell-cycle progression
            and maturation in mice
  JOURNAL   Nat Commun 14 (1), 3729 (2023)
   PUBMED   37349316
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 944)
  AUTHORS   Li,H., Huo,Y., He,X., Yao,L., Zhang,H., Cui,Y., Xiao,H., Xie,W.,
            Zhang,D., Wang,Y., Zhang,S., Tu,H., Cheng,Y., Guo,Y., Cao,X.,
            Zhu,Y., Jiang,T., Guo,X., Qin,Y. and Sha,J.
  TITLE     A male germ-cell-specific ribosome controls male fertility
  JOURNAL   Nature 612 (7941), 725-731 (2022)
   PUBMED   36517592
REFERENCE   3  (bases 1 to 944)
  AUTHORS   Khatter,H., Myasnikov,A.G., Natchiar,S.K. and Klaholz,B.P.
  TITLE     Structure of the human 80S ribosome
  JOURNAL   Nature 520 (7549), 640-645 (2015)
   PUBMED   25901680
REFERENCE   4  (bases 1 to 944)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   5  (bases 1 to 944)
  AUTHORS   Kondrashov,N., Pusic,A., Stumpf,C.R., Shimizu,K., Hsieh,A.C.,
            Ishijima,J., Shiroishi,T. and Barna,M.
  TITLE     Ribosome-mediated specificity in Hox mRNA translation and
            vertebrate tissue patterning
  JOURNAL   Cell 145 (3), 383-397 (2011)
   PUBMED   21529712
REFERENCE   6  (bases 1 to 944)
  AUTHORS   Tkatchenko,T.V., Moreno-Rodriguez,R.A., Conway,S.J.,
            Molkentin,J.D., Markwald,R.R. and Tkatchenko,A.V.
  TITLE     Lack of periostin leads to suppression of Notch1 signaling and
            calcific aortic valve disease
  JOURNAL   Physiol Genomics 39 (3), 160-168 (2009)
   PUBMED   19723774
REFERENCE   7  (bases 1 to 944)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   8  (bases 1 to 944)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC137127.11.
            
            On Oct 5, 2022 this sequence version replaced NM_025974.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BQ964020.1, CD770380.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-29                AC137127.11        151821-151849       c
            30-131              AC137127.11        151165-151266       c
            132-226             AC137127.11        150500-150594       c
            227-326             AC137127.11        149687-149786       c
            327-380             AC137127.11        149545-149598       c
            381-944             AC137127.11        148704-149267       c
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 71.74 cM"
     gene            1..944
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /note="ribosomal protein L14"
                     /db_xref="GeneID:67115"
                     /db_xref="MGI:MGI:1914365"
     exon            1..29
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..680
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /note="60S ribosomal protein L14"
                     /codon_start=1
                     /product="large ribosomal subunit protein eL14"
                     /protein_id="NP_080250.1"
                     /db_xref="CCDS:CCDS40809.1"
                     /db_xref="GeneID:67115"
                     /db_xref="MGI:MGI:1914365"
                     /translation="MVFRRYVEVGRVAYISFGPHAGKLVAIVDVIDQNRALVDGPCTR
                     VRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKA
                     KMTDFDRFKVMKAKKMRNRIIKTEVKKLQRAAILKASPKKAAVAKAAIAAAAAAAAAK
                     AKVPAKKATGPGKKAAGQKAPAQKAAGQKAAPPAKGQKGQKTPAQKAPAPKAAGKKA"
     exon            30..131
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /inference="alignment:Splign:2.1.0"
     exon            132..226
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /inference="alignment:Splign:2.1.0"
     exon            227..326
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /inference="alignment:Splign:2.1.0"
     exon            327..380
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /inference="alignment:Splign:2.1.0"
     exon            381..944
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /inference="alignment:Splign:2.1.0"
     regulatory      694..699
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /note="hexamer: AATAAA"
     polyA_site      721
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /note="major polyA site"
     regulatory      901..906
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
                     /note="hexamer: AATAAA"
     polyA_site      944
                     /gene="Rpl14"
                     /gene_synonym="3100001N19Rik; CAG-ISL-7; CTG-B33; L14"
ORIGIN      
        1 ctctcttctc gctgagcgcc gccaacatgg tgttcaggcg ttacgtggag gttggccggg
       61 tggcctacat ttccttcggg ccccatgctg gaaagctggt cgcaattgta gatgtcattg
      121 atcagaacag ggctttagtg gatggaccct gtactcgggt gaggaggcag gccatgccct
      181 tcaaatgcat gcagctcact gacttcatcc tcaagttccc acacagtgcc cgccagaagt
      241 atgtccgaaa agcttgggag aaggcggata tcaatacgaa atgggcagcc acaagatggg
      301 ccaagaaaat tgatgccaga gaaaggaaag ccaagatgac agactttgat cgtttcaagg
      361 tcatgaaggc aaagaaaatg aggaacagaa taatcaagac tgaagtaaag aaacttcaaa
      421 gagctgctat cctgaaagct tctcccaaaa aagcagctgt ggccaaagct gccattgcgg
      481 cggctgcagc tgctgctgct gctaaagcta aagtcccagc caagaaggcc acaggaccag
      541 gcaagaaggc tgcaggccag aaggctcctg ctcagaaggc tgcaggccag aaggcagcac
      601 ctcctgctaa aggtcagaag ggtcagaaga ccccagccca gaaagcacct gctccaaagg
      661 cggctggcaa gaaagcgtga ggctacacag aataataaag gttctttttg acggtggtaa
      721 atctcatgtg tggactctaa gcttgtcgcc aagtgggaaa tagactggtg ggattgtaga
      781 taggatgggc tacttaaact cattctaccc aggccttagt acttagcata cagccagagt
      841 caaactgatc ctttatacag ggggtaccat gacagtacaa cagtgtcgtt aaccctaaca
      901 aataaatttc ccaccaacgg gtggaattcc ttcattttga tgaa
//
