LOCUS       NM_026632                655 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus replication protein A3 (Rpa3), mRNA.
ACCESSION   NM_026632
VERSION     NM_026632.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 655)
  AUTHORS   McJunkin,K., Mazurek,A., Premsrirut,P.K., Zuber,J., Dow,L.E.,
            Simon,J., Stillman,B. and Lowe,S.W.
  TITLE     Reversible suppression of an essential gene in adult mice using
            transgenic RNA interference
  JOURNAL   Proc Natl Acad Sci U S A 108 (17), 7113-7118 (2011)
   PUBMED   21482754
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY057686.1, AK009916.1 and BU757427.1.
            
            On Nov 15, 2008 this sequence version replaced NM_026632.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK625053.1, BQ746890.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                BY057686.1         2-32
            32-635              AK009916.1         4-607
            636-655             BU757427.1         1-20                c
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 3.53 cM"
     gene            1..655
                     /gene="Rpa3"
                     /gene_synonym="14kDa; C330026P08Rik"
                     /note="replication protein A3"
                     /db_xref="GeneID:68240"
                     /db_xref="MGI:MGI:1915490"
     exon            1..142
                     /gene="Rpa3"
                     /gene_synonym="14kDa; C330026P08Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..409
                     /gene="Rpa3"
                     /gene_synonym="14kDa; C330026P08Rik"
                     /note="RP-A p14; RF-A protein 3; replication factor A
                     protein 3"
                     /codon_start=1
                     /product="replication protein A 14 kDa subunit"
                     /protein_id="NP_080908.1"
                     /db_xref="CCDS:CCDS19909.1"
                     /db_xref="GeneID:68240"
                     /db_xref="MGI:MGI:1915490"
                     /translation="MEDIMQLPKARVNASMLPQYIDRPVCFVGKLEKIHPTGKMFILS
                     DGEGKNGTIELMEPLDEEISGIVEVVGKVTAKATVLCASYTLFKEDTNRFDLELYNEA
                     VKIINELPQFFPVGLPQHE"
     exon            143..217
                     /gene="Rpa3"
                     /gene_synonym="14kDa; C330026P08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            218..326
                     /gene="Rpa3"
                     /gene_synonym="14kDa; C330026P08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            327..638
                     /gene="Rpa3"
                     /gene_synonym="14kDa; C330026P08Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      620..625
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rpa3"
                     /gene_synonym="14kDa; C330026P08Rik"
                     /note="hexamer: AATAAA"
     polyA_site      638
                     /gene="Rpa3"
                     /gene_synonym="14kDa; C330026P08Rik"
                     /note="major polyA site"
ORIGIN      
        1 attttctgct ttcctgcggg ttgcgagtgt tggcggcaga atcatggagg acataatgca
       61 gctccccaaa gcgcgcgtca acgccagcat gttaccacag tatatcgacc ggcccgtgtg
      121 cttcgtgggg aagctggaaa agattcatcc cactggaaaa atgtttattc tttcagatgg
      181 agaaggaaaa aatggaacca ttgaattgat ggagccactt gacgaggaaa tctctgggat
      241 tgtagaagta gttggaaaag tcacagccaa ggcgaccgtg ctctgtgcat cttataccct
      301 gtttaaggaa gatactaatc gctttgatct tgaactttac aatgaagctg tgaaaattat
      361 caatgagctt cctcagtttt tccctgtagg gcttccacaa catgaatgag cttcttcagt
      421 ttcttaagat tgccaggaag ctacactgaa ggctattaag gaagactcct gcagtttaat
      481 ggagcgactc ctataatttc taatatttaa tttgttcttt tatatatata tatttttttg
      541 taaatctatt atgacagttt acaactaagc ctttttataa acttttttta aaagtgatac
      601 ttcaatatat agtctgaata ataaaaatca aaatatgaaa aaaaaaaaaa aaaaa
//
