LOCUS       XM_030249139            8858 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus roundabout guidance receptor 2 (Robo2),
            transcript variant X5, mRNA.
ACCESSION   XM_030249139
VERSION     XM_030249139.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8858
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..8858
                     /gene="Robo2"
                     /gene_synonym="2600013A04Rik; 9430089E08Rik;
                     D230004I22Rik; mKIAA1568"
                     /note="roundabout guidance receptor 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 mRNAs, 34 ESTs, 767 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:268902"
                     /db_xref="MGI:MGI:1890110"
     CDS             233..5005
                     /gene="Robo2"
                     /gene_synonym="2600013A04Rik; 9430089E08Rik;
                     D230004I22Rik; mKIAA1568"
                     /codon_start=1
                     /product="roundabout homolog 2 isoform X4"
                     /protein_id="XP_030104999.1"
                     /db_xref="GeneID:268902"
                     /db_xref="MGI:MGI:1890110"
                     /translation="MARRQESICGRPWTWTPGLLMLIILGIHQGSGQGQGSRLRQEDF
                     PPRIVEHPSDVIVSKGEPTTLNCKAEGRPTPTIEWYKDGERVETDKDDPRSHRMLLPS
                     GSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSRNASLEVALLRDDFRQNPTDVVVA
                     AGEPAILECQPPRGHPEPTIYWKKDKVRIDDKEERISIRGGKLMISNTRKSDAGMYTC
                     VGTNMVGERDSDPAELTVFERPTFLRRPINQVVLEEEAVEFRCQVQGDPQPTVRWKKD
                     DADLPRGRYDIKDDYTLRIKKAMSTDEGTYVCIAENRVGKVEASATLTVRVRPVAPPQ
                     FVVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPT
                     GDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPINQTLAV
                     DGTALLKCKATGEPLPVISWLKEGFTFLGRDPRATIQDQGTLQIKNLRISDTGTYTCV
                     ATSSSGETSWSAVLDVTESGATISKNYDMNDLPGPPSKPQVTDVSKNSVTLSWQPGTP
                     GVLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSD
                     PSPMSDPVRTQDISPPAQGVDHRQVQKELGDVVVRLHNPVVLTPTTVQVTWTVDRQPQ
                     FIQGYRVMYRQTSGLQASTVWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQG
                     MDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPADHQNGIIQEYKIWC
                     LGNETRFHINKTVDAAIRSVVIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGGRN
                     EVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLYWRRKKRKGLSNYAV
                     TFQRGDGGLMSNGSRPGLLNAGDPNYPWLADSWPATSLPVNNSNSGPNEIGNFGRGDV
                     LPPVPGQGDKTATMLSDGAIYSSIDFTTKTTYNSSSQITQATPYATTQILHSNSIHEL
                     AVDLPDPQWKSSVQQKTDLMGFGYSLPDQNKGNNALLYIPDYRLAEGLSNRMPHNQSQ
                     DFSTTSSHNSSERSGSLSGGKGGKKKKTKNSSKAQKNNGSTWANVPLPPPPVQPLPGT
                     ELGHYAAEQENGYDSDSWCPPLPVQTYLHQGMEDELEEDEDRVPTPPVRGVASSPAIS
                     FGQQSTATLTPSPREEMQPMLQAHLDELTRAYQFDIAKQTWHIQSNTPPPQPPAPPLG
                     YVSGALISDLETDVPDEDADDEEEPLEIPRPLRALDQTPGSSMDNLDSSVTGSMVNGW
                     GSASDEDRNFSSHRSSVGSSSDGSIFASGSFAKALVAAADKAGFRLDGTSLTRTGKAF
                     SSSQRQRPTSPFSTDSNTSAAQNQSQRPRPTKKHKGGRMDPQPVLPHRREGMPDDLPP
                     PPDPPPGQGLRQQIGLSQHSGNVENSTERKGSSLERQQAANLEDTKSSLDCPAKTVLE
                     WQRQTQDWINSTERQEETRKAPHKQGVGSEESLVPYSKPSFPSPGGHSSSGTSSSKGS
                     TGPRKADVLRGSHQRNANDLLDIGYVGSNSQGQFTGEL"
ORIGIN      
        1 cccagatagg cttcacatgt gacggcaatt tagcttaaaa gccatattga ttcactccat
       61 ctcctcttca tcttctctgt tccaaaactg gtaccttttt tttttttttt tttttttgag
      121 gggggcttag ggaggagttg aaaacataac tttgaagagg atgacttacg gagaatgctt
      181 ttctcctcac tttggaaatc tttggctaca agaagagtga gtttaaaatg caatggccag
      241 aagacaagaa agtatctgtg gaaggccgtg gacgtggacg ccaggactac tgatgctgat
      301 catccttggc attcatcagg ggagtgggca aggtcaagga tctcgtcttc gtcaagaaga
      361 ctttcccccc aggatcgtag aacacccttc tgatgtcatc gtctccaagg gagagcccac
      421 cactctgaac tgtaaagcag agggccgacc cacccccacc attgaatggt acaaggatgg
      481 tgagagggtg gagacagaca aggatgatcc caggtcccac agaatgcttc tgcccagcgg
      541 atctttattc tttttgcgaa ttgttcatgg gcgcagaagt aaaccggacg aagggagtta
      601 cgtttgtgtt gcaaggaact atcttggtga agcagtgagt cgaaatgcat ctctggaagt
      661 ggcattattg cgagatgact tccggcaaaa ccccacagat gtggtagtcg cagctggaga
      721 gcctgcaatc ttggagtgcc agccaccacg gggacaccca gaaccaacca tctactggaa
      781 aaaggacaaa gtccgaattg atgacaagga agagagaata agtatccgtg gtgggaagct
      841 gatgatctct aatactagga aaagcgatgc tggcatgtac acctgtgtgg gaaccaatat
      901 ggtgggagaa agggacagcg accctgcaga gctcactgtc tttgaacgac ccacatttct
      961 caggaggcca attaaccagg tggtgctaga ggaagaagct gtagaattcc gttgtcaggt
     1021 ccaaggagat ccccagccaa cggtgaggtg gaaaaaagat gatgcagact tgccgagagg
     1081 aaggtatgat atcaaagatg actacacgct gagaattaaa aaggccatga gtactgatga
     1141 aggtacctat gtgtgtattg ctgagaatcg ggtgggaaaa gtggaagcct ctgctaccct
     1201 cactgtccga gttcgccctg ttgctcctcc acagtttgtg gttaggccaa gagatcagat
     1261 cgttgctcaa ggccgaacag tgacattccc ctgtgaaact aaaggaaacc cacagccagc
     1321 tgttttttgg cagaaagaag gcagccagaa cctacttttc ccgaatcaac ctcagcagcc
     1381 caacagccga tgttcagtgt cgcccacggg ggacctcacc atcaccaaca tccagcgttc
     1441 agatgcgggt tactacatct gccaggccct aaccgtggca ggaagcattt tagctaaagc
     1501 acagttggaa gttactgacg ttttgacaga tagacctcca cccataatct tgcaaggacc
     1561 aataaaccaa acacttgcag tagacggtac agcattgttg aagtgtaaag ccactggtga
     1621 gcctctgcct gtaattagct ggctaaagga gggctttact tttctgggga gagatccaag
     1681 agccacgatc caagaccaag gaacactgca gattaagaat ttacggatat ctgatactgg
     1741 cacttatact tgtgtggcta caagttccag tggagagact tcctggagtg cagtgctgga
     1801 tgtaacagaa tctggagcaa caatcagtaa aaattatgat atgaatgacc tcccgggacc
     1861 accatccaaa cctcaggtca ctgatgtttc taagaacagt gtcaccttat cctggcagcc
     1921 aggtacacct ggcgttcttc ctgcaagcgc gtatatcatt gaggctttca gccaatcggt
     1981 gagcaatagc tggcagacag tggcaaacca tgttaagaca actctgtata cagtaagggg
     2041 gctgaggccc aacacaatct acttgtttat ggtcagagcg atcaacccac aaggtctcag
     2101 tgatccaagt cctatgtcgg atcctgtacg cacacaagat atcagccccc cagcacaagg
     2161 agtggaccac agacaggtgc agaaggaatt aggtgatgtc gttgttcgtc tccataatcc
     2221 agttgtcctg acacctacaa ctgttcaagt cacatggacg gtggaccgac aaccccagtt
     2281 tattcagggc tacagagtga tgtaccgtca gacttcggga ctacaagcct caactgtgtg
     2341 gcagaatcta gacgccaaag tcccgactga gaggagtgct gtccttgtga atttgaaaaa
     2401 gggggtgact tatgaaatta aagtccggcc gtattttaac gagttccaag gaatggacag
     2461 tgaatcgaaa acagtccgaa ccactgagga agccccaagt gcccctcccc agtctgtcac
     2521 tgtgctgaca gttggaagtc acaacagcac aagcatcagt gtttcctggg atcctccacc
     2581 agccgaccac cagaatggaa ttattcagga atataagatc tggtgtctgg gaaacgaaac
     2641 gcgattccat atcaataaaa cggtggatgc agccattcgc tctgtagtaa taggtggctt
     2701 gttccctgga attcagtacc gggtagaagt ggcagctagc acaagtgcag gggttggagt
     2761 aaaaagtgaa ccacagccga taataattgg gggacgtaac gaagttgtca ttactgaaaa
     2821 caataacagc atcactgagc aaatcacgga tgtcgtgaag caaccggcat ttatagctgg
     2881 cattggtggt gcctgctggg taattctgat gggttttagc atctggttgt actggagaag
     2941 aaagaagaga aagggactca gcaattatgc tgtaacattt caaagaggag atggaggact
     3001 aatgagcaat gggagccgtc caggtcttct aaatgctggc gatcccaatt acccatggct
     3061 tgctgattct tggccagcca cgagtttgcc agtgaacaat agcaatagtg gcccaaatga
     3121 aattggaaat tttgggcgtg gagatgtgct gcctccggtg ccaggccaag gggataaaac
     3181 agcgaccatg ctctcggatg gagccattta tagcagcatt gacttcacta ccaaaaccac
     3241 ttacaacagt tccagccaaa taacacaggc caccccatat gccactacac aaatcctgca
     3301 ttcaaacagc atccacgaac tggcagttga tcttcctgat ccacagtgga aaagctcagt
     3361 tcaacagaag acagacctca tgggatttgg ttattcgcta cctgatcaga acaaggggaa
     3421 caacgcctta ctttacatcc ctgactaccg attggctgag ggattgtcta atagaatgcc
     3481 acacaaccag tcacaggatt tcagcaccac cagctctcac aacagctcag aaaggagtgg
     3541 cagtctctca ggtgggaaag gtggaaaaaa gaagaaaact aaaaattctt cgaaagcgca
     3601 gaaaaacaac ggatccactt gggctaatgt ccctctacct cctcctcccg tccagcccct
     3661 tcctggtaca gagctgggcc actatgctgc ggaacaagaa aatggctatg acagtgacag
     3721 ctggtgccca ccattaccgg tgcaaacata cttgcatcag ggtatggaag atgagctgga
     3781 agaagacgaa gatcgggtcc caacacctcc tgttcgcggc gtggcctctt caccagctat
     3841 ctcttttgga cagcagtcca ctgccactct tactccatcc ccacgggaag agatgcaacc
     3901 catgctgcaa gctcacttgg atgagttgac aagggcctat cagtttgata tagcaaaaca
     3961 aacatggcac attcaaagca ataccccacc tccacaaccc ccagctccgc cattaggtta
     4021 cgtgtccgga gccttgattt ctgatttgga gacagatgtt ccagatgagg atgctgatga
     4081 tgaagaggaa ccattagaaa ttcccaggcc cctcagagca ctagaccaga cacctggatc
     4141 cagtatggac aatctagaca gctctgtcac aggttcaatg gtaaatggat ggggctctgc
     4201 atctgatgag gatcgtaact tttctagtca tagatctagt gtaggtagct cctcagatgg
     4261 ctccatcttt gccagcggca gctttgcaaa agcattggtg gcagcagcag acaaagctgg
     4321 ctttaggctg gatggaacca gtcttacgag aacaggaaaa gcctttagct cctctcaaag
     4381 gcagcggccc accagcccat tttctacgga cagtaacacc agtgctgccc agaatcaaag
     4441 ccagaggcct cggcccacga aaaaacataa gggaggacgg atggacccac agccagtgtt
     4501 acctcatcgg agggaaggga tgccagatga tcttccccca ccaccagatc ccccaccagg
     4561 tcagggttta aggcagcaga taggcctgag ccaacactct ggtaacgtgg aaaactcaac
     4621 agagagaaaa ggaagctctc tagagagaca acaagcagcc aacttagaag acacaaagag
     4681 ctcattggat tgtccagcta aaactgttct agagtggcag cgtcaaaccc aggactggat
     4741 aaactctaca gaacgccaag aagaaactcg gaaagcccca cacaaacaag gggttggatc
     4801 agaggagtcc ctggtgccct acagcaagcc cagcttcccg tctcctggcg ggcacagctc
     4861 atcaggaaca tcttcctcta aagggtccac tggccctcgg aaggctgacg tgctgagagg
     4921 cagccaccag aggaatgcca atgaccttct cgacattgga tatgtgggct caaatagtca
     4981 aggacagttt acaggtgaat tgtagtaact gagaggggac atacaaagat gctctgagga
     5041 ccatcaggtc caaactcatg gaagtgataa catttaacag tgcaatgaac aatttcttta
     5101 tttatgtact attaaaaaaa aactgtaaat gcaatgtaaa gacacacagc cacacatatt
     5161 ccacagttat tttcttgtgt tcttctctta cttacaccac ccaccttaac tctttcttgt
     5221 caggagtata taagaaaaag aaagaaagca aaactcaccc tccaggaaga aaaggatttt
     5281 tcctctgtat ataatttctt ttgtgcattg ctatgcaagc tcactctttt taactctgtt
     5341 catattattg tctgttctga ttggtctgtt gtactatatg tgaattaatg ggctgtggtg
     5401 ccatatatta acttttaatt gtgtaacttt ttatgtttaa attttgcact gcgattttat
     5461 ttggtgataa gcacaaatct ctactcctca tgacatgaag aaaagattga atgtgaaggg
     5521 agttttctgt actgtaagtt aggttggata atgctggtgt aaccaatcca gttagatggt
     5581 tttcagttgg gggtgtagaa ataggaagat cgaaggaatg atggtgttgg caaagtcttc
     5641 ttgaaacaac agatattgag acaattttaa gaagcagaaa gatggatact attgactaaa
     5701 gcaggggtca aaagaagggg gtttaagtct agacagagta tgtaataaag tatggtggta
     5761 gcaaagatgt actaacttgc tttaaaaata ttattaaagt tttatttaga atgaacttta
     5821 cctgccattg taattaaccc atcttagaat tacaatgagc aaaataaaaa tcaaggtgtt
     5881 tcaagagatc tgtatttata ttacagcttt ttaaaaacag cagttttgaa taatcataat
     5941 taatctctcc aactcattaa gtcagactat aacatggagt tccccaagga aacaaacaaa
     6001 aaaaatgaac tccagaaact ctagcaaata gttaaagaag caacttattc ttcgagcata
     6061 ctcggctact cttgaatatg agctcaattg caatatcttg ttcatctttc taatacatgt
     6121 acagtacata ttagaggatg taggcacatc acttaagttc atttcttttt aaaaaaaaaa
     6181 agcaaactaa tgcattctgc atacaatttt gtgtttcttt tggttaaaat gtgaaatcga
     6241 tgccaccaga tgtatagcca cattataagt gcttaaaggc agtgctcaca gtatgttcag
     6301 tttccagtta gtagatttat tggactcaat attttctggt acattctcag aaattggcta
     6361 ccaactcaaa tctgtttgac ccattttgaa tgagtaaatc ggaaagaaca gtcaaaaggg
     6421 agaaaaaaat gcatgtttat acacttttta aataaaacca aatcttgtaa gtggacatta
     6481 ataacagtgt cctgcctcat ttgttttcac gactctgaga acaaggagtt gctcaacatc
     6541 cattatgtat gctcaagata aatgtgactt tgaaatgtat gttagctact gtacatgtat
     6601 gtaagtcaag tagatgatag ccttcctgaa actaccacta ataatatttt cccatgtgct
     6661 acttacacaa gcttaaattc tagttcagca aatgtttttc attatttttt cttacggttt
     6721 attcaataga gggtacctag aaaaatattc agtgtgatgg tcaacatatt gagtgttcaa
     6781 gtaggggata tttactttgg caatacatac tgtgcattat tggttcagat gccaattcat
     6841 gagacattat cataggaaat ggataatata agaacatggc tctaagggtc cttctccaca
     6901 ggcaagcata gaatttgagg ttcttcatgg gtcccaaaac ttgcttagtg ttatatactt
     6961 aacttccttc actgaagtat caagcaattc taacacaccg tttaacaact ttctaccatc
     7021 agtgcctgca ttttattgaa gtttgatgtc tctggtacaa ggaaatagag aaagctgaac
     7081 agtttctgtt gggagaaaaa gtttctgtaa ttattgtcaa ttctaagttg tgatgaatat
     7141 aacttttcat ctatacagtt ccttactcat ggtctctatt taaaagcata ggatctttta
     7201 agatatactt ttagctgagt cttcactgta tgttcatgaa taatataatt tagtgaaaaa
     7261 ctttagtaca tcatatgtat ggtaactgac atttgcagat tattatcaaa ccaaatcata
     7321 agaaataata tcttcagatc acatgatggc ttaccgaaca atttcaggtt atagcatgat
     7381 gtctttctga ttgtcttcag tatatgatca taagcaatta tattgtgtcc atacagttta
     7441 catactgtga ttcccgcaaa atcttgcatc tgatatctac catgaagatg aaataatatg
     7501 ctatgaattt caggcataga catactatca gcaatagaaa gccttcatca tctagatatc
     7561 tggataaatc cattcatcgt caaccatcag attgttaact ggggaacacg tacctccctc
     7621 acaaatgctt tcttttcgtc ttgtagttga ttgaatgtga taggaaatct gctgagttga
     7681 ctcttctgtg ggcctgagca gaaacatgca taagccatca gaaggaagtc tggatgggaa
     7741 ggaaaccttg tctttcactc gtaggcaata ctgctgtgta gtcacggcag acccaagcac
     7801 agcttctttc agaacatgca aagtctcctt atgaaatata cacatcagtg cccaaactca
     7861 ggtgtaccag tgtaaagcgt agggtttgcc tacccttttt tcatatcatt ttacataagc
     7921 aagttaggag actacagggc tatgaaaata aatgtttcct taacaggatt tggagcaagt
     7981 tcacgggagt acataggaca gtcgagccca gtgtaaacac taccaaagga aaggacagcc
     8041 ttgcagaagc gtgagctccg actaacagag cggcttaagt atgctctgtg atacagctta
     8101 atgcactccc tattcaaatc ccactgtcaa tgggatttaa gttgccagtt tatatgtgat
     8161 ttcatggaac acaaccaagt tctacttaat acctttatgc aatttttttt tcactgatga
     8221 aaaatcaata tccacatcaa tgggtgccca gctgcggatc acctctccta aaaagcgatc
     8281 ttgtcagtat tgaagaaatg tagaaccata attttcacta ctaatatcat tttgctcaac
     8341 tacttctgta tattgtggaa aaaggggtgg ggccggggga atgtgtgttt ccacattttc
     8401 tgagaggtga aaatattttt gtgttgcttt gtcctaatgg gtacttcaaa tgaaacacca
     8461 tacaatttta aatgacatgc aattaacgaa tattttttac tctcataaca ttaaaagcat
     8521 ttgttgtgat tttcaagtgt tacaagatag atttttgtgg tcgtgggtag acgttttata
     8581 ctttgtttta tagatggatt tttttcccac tgtcgtttac ttgagtggac aaacagtatc
     8641 ccaagtctca aagtgtttca ttggatgttg ttagatcagc aaagaaattg gcagaaaatt
     8701 gattcatagt attgtcaaag aattgtgtat tgtgtattca ctgggaaaaa taaaaaatat
     8761 attcacattc caattttgta aaaaaaaaaa caaaaagcca tttatgtaaa caaatttctc
     8821 tgtggacaaa ccaaaaatag atccttgtgt cactttta
//
