LOCUS       NM_181405               3056 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus arginyl aminopeptidase (aminopeptidase B)-like 1
            (Rnpepl1), mRNA.
ACCESSION   NM_181405
VERSION     NM_181405.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   VanBuren,V., Piao,Y., Dudekula,D.B., Qian,Y., Carter,M.G.,
            Martin,P.R., Stagg,C.A., Bassey,U.C., Aiba,K., Hamatani,T.,
            Kargul,G.J., Luo,A.G., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Assembly, verification, and initial annotation of the NIA mouse
            7.4K cDNA clone set
  JOURNAL   Genome Res 12 (12), 1999-2003 (2002)
   PUBMED   12466305
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC119846.14, CA315475.1, CX213696.1, BQ559332.1, CX218581.1,
            CA750931.1, AV008848.2 and AW488182.1.
            
            On Jan 13, 2011 this sequence version replaced NM_181405.3.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC031789.1, SRR7974084.28429.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-296               AC119846.14        105902-106197       c
            297-738             CA315475.1         1-442
            739-816             CX213696.1         1-78
            817-1114            BQ559332.1         1-298
            1115-1872           CX218581.1         1-758
            1873-2396           CA750931.1         240-763
            2397-3026           AV008848.2         44-673
            3027-3056           AW488182.1         1-30                c
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 46.6 cM"
     gene            1..3056
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /note="arginyl aminopeptidase (aminopeptidase B)-like 1"
                     /db_xref="GeneID:108657"
                     /db_xref="MGI:MGI:1914170"
     exon            1..659
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            660..800
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            801..952
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            953..1069
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1070..1305
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1306..1419
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1420..1532
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1533..1641
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1642..1872
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1873..2015
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2016..3039
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3009..3014
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      3027
                     /gene="Rnpepl1"
                     /gene_synonym="1110014H17Rik"
                     /note="major polyA site"
ORIGIN      
        1 gttgtgcccg cgcccggccg ccaccgccgc cgccgccgcc gccaccacca ccgccaccgc
       61 caccgccacc gccgcccggg cccctcgccc actgaccgcg gcctacagtg gccgccgccc
      121 atggatttca cctagcgccg gtggtcatgg cggcgcagtg ctgctgccgc aaggcgcccg
      181 gcgccgaagc cgcgcccgcc cgcccgccgc cggagccgcc gcccgccctg gacgtggcct
      241 cggcctccag cgcgcagctc ttccgcctcc gccacctgca gctgggcctg gagctgcggc
      301 ccgaggcgcg tgagctggcc ggctgcctgg tgctggaact gtgcgcgctg cggcccgcgc
      361 cccgcgcgct cgtgctcgac gcgcacccgg ccttgcgcct acactcggtc tcgtttcgcc
      421 gcgcctccgc cgtctccgag tcgccgtgca ccttcgcctt ccctgccccg gggtcggggc
      481 ccccgctgcc cggcttcgcc gatgcgcctg gagcggagtc tgccagctgc ccgctggcct
      541 tcaggctgga cccgttcacc gactatggct cctctctgac cgtcacactg cctcccgagg
      601 tgcaggcgca ccagcccttc caggtcatcc tacgctacac ctcgaccgac gccccggcca
      661 tctggtggct ggacccggag ctgacctatg gcaatgccaa gccattcgtc ttcacccagg
      721 gacactctgt gtgcaaccgc tccttcttcc cgtgcttcga tacgccggcg gtcaagtgca
      781 cctactcagc cgttgtcaag gcccccttag gggtacaggt gctgatgagt gcaacccaga
      841 gcgtgtacgt ggaagaggaa ggcctctacc acttccacat ggagcaccca gtacccgcct
      901 acctcgtagc ccttgtggcc ggagacctca agccagcaga cattgggccc aggagccgtg
      961 tgtgggctga gccatgcctc ctgcccacag ccaccagcaa gctatcaggt gcagtggaac
     1021 agtggctgag tgcagcagag cgattatatg gaccatacat gtggggcaga tatgacatcg
     1081 tcttcctgcc gccctccttc cccatcgtgg ccatggagaa cccctgcctc accttcatca
     1141 tctcctccat ccttgagagt gacgagttcc tggtgattga tgtcatccat gaggtagccc
     1201 acagctggtt cggcaatgct gtcaccaacg ctacttggga ggagatgtgg ctgagtgagg
     1261 gcctggccac ctatgcacag cgccgcatca ccacggagac ctatggggct gccttcacct
     1321 gcctagagac agccttccgc ttggatgccc tgcataggca gatgcggctt cttggggaag
     1381 atagtccggt tagcaagttg caggtcaagc tagaaccagg cgtgaatcct agtcacctga
     1441 tgaacctgtt cacctatgag aagggctact gcttcgtgta ctacctgtcc cagctctgtg
     1501 gcggtcccca gcgctttgac gactttctcc gagcctatgt ggagaaatac aagttcacca
     1561 gtgtggtggc ccaggacctg ctggattcct tcctgagctt cttccctgaa ctgaaggagc
     1621 agagcgtgga ctgccgggca gggctggagt tcgagcgctg gctcaatgcc acaggcccac
     1681 cactggctga gccagacctg tcacaggggt ccagcctaac ccggcctgtg gaagcccttt
     1741 tccagctgtg gactgcagag cccctggagc aggcggcagc ttcagccagt gccattgaca
     1801 tctccaaatg gaggaccttc cagacagcac tcttcctgga ccggctgcta gatggatccc
     1861 cgttgcctca ggaggtggtg atgagcctgt ccaagtgcta ctcatccctg ctggactcca
     1921 tgaacgctga gatccgcatc cgctggctgc agatcgttgt ccgcaatgac tactatcctg
     1981 atcttcacag ggtccgccgt ttcctggaaa gccagatgtc gcgcatgtac accatcccac
     2041 tgtacgagga cctctgcact ggtgccctca agtccttcgc tctagaggtc ttctaccaaa
     2101 cccagggccg gctgcatccc aacttgcgca gaaccatcca gcagatcctg tcccaggggc
     2161 taggccccag tgcggagccg agtacagagc ccagcacgga cctgggcggt gctgaggcag
     2221 acacgaaccc agactcgcca gccctgctgc tcggggacga ggcccccagc agcaccatct
     2281 ctctcaggga cgtcaatgtg tctgcctagc cttgatggta actgaccctc gacctcccag
     2341 acaccacgat tgtgcctttt gtggtccggg ccgccatgac tgcgccttgg ctctggccac
     2401 gagctctgcc cgggaccata acccctccca ttggctccag gccaggggca tagggaaaag
     2461 gaactgtatt cattgatgct cgtggaccag ggcccaccct gtccctgctc tcttgcactg
     2521 caggccccag ggatggccta tacacactat gcctcctgtt tcaacactga cagccatgcc
     2581 tcaccctgga agccagcatc tgctgacact gccctgggga cagtgacccc agcggtccca
     2641 cagcaacaac cacaatgtgc cttaacgtgt gccagagacc cagaatgcac ggtcctggaa
     2701 atgtgctttc ctgcagagcc ctgtgtctgg cccctgggct ggatggaaag ccttgcttta
     2761 gggacagaag acagaggggc aaggacacag gcattccatc agtgtggggg caggagacag
     2821 aggaagagac tagacctctc aagcaggcct gtctctgtac tagtccaagc ccccagaggt
     2881 acagggaaga atggcctatc cttgtggcga cctgtgtacc attggtgctc tctgtgcctg
     2941 tctgctagga gagaccccag gctgtgactt cagcctggaa ctgcaacagg aaccatggtg
     3001 actgtcccat taaatctcca ctctgcagat ctgacctcca aaaaaaaaaa aaaaaa
//
