LOCUS       NM_029809               3257 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus ring finger protein 225 (Rnf225), mRNA.
ACCESSION   NM_029809 XM_355858
VERSION     NM_029809.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3257)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3257)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK028523.1 and BF460478.1.
            
            On Dec 10, 2009 this sequence version replaced NM_029809.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK028523.1, BC141220.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3067              AK028523.1         1-3067
            3068-3257           BF460478.1         1-190               c
FEATURES             Location/Qualifiers
     source          1..3257
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 7.69 cM"
     gene            1..3257
                     /gene="Rnf225"
                     /gene_synonym="2310014L17Rik"
                     /note="ring finger protein 225"
                     /db_xref="GeneID:381845"
                     /db_xref="MGI:MGI:1924198"
     exon            1..51
                     /gene="Rnf225"
                     /gene_synonym="2310014L17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            52..3239
                     /gene="Rnf225"
                     /gene_synonym="2310014L17Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..1061
                     /gene="Rnf225"
                     /gene_synonym="2310014L17Rik"
                     /codon_start=1
                     /product="RING finger protein 225"
                     /protein_id="NP_084085.1"
                     /db_xref="CCDS:CCDS20818.1"
                     /db_xref="GeneID:381845"
                     /db_xref="MGI:MGI:1924198"
                     /translation="MPCPRLPWLRRHRTSQGSGPSSPSTVSAPNSPSRGEDEDAEEEE
                     GDGTPGSGPILPPTSPMECLICVSPFDGIFKLPKRLDCGHVFCLECLARLSLATAGGG
                     DAVACPMCRAPTRLAPRRGLPALPTQPGLLPRDARAPLPRQGSVRFDRRRGLLYLRPP
                     PPSPGPRKSRTVRAPPPPPPLRLGRPLSRRLSLSSPAWAFNAAVALAVLVAAGLVVSG
                     VYIFFLIPHVTNSGVRPQTVALAPENDFWVSPRPTPVAPWTHAWTRRPTKPDLDLDDT
                     LPEATKDTPELEEATKDPVETQGIPDLPPDQTPKAEIDLNWNPKAQADGKKVQLQQ"
     regulatory      2131..2136
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rnf225"
                     /gene_synonym="2310014L17Rik"
                     /note="hexamer: AATGAA"
     polyA_site      2152
                     /gene="Rnf225"
                     /gene_synonym="2310014L17Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggtcagaacg gaagagacgc tgcaatcccg cacaaggaaa ggtgtctaca ggtccagtct
       61 gaatgccgtg tcctcggctg ccctggctcc gccgccaccg aacatcccag ggctctggcc
      121 ccagctcccc aagtaccgtc tctgctccta actcccctag cagaggcgaa gacgaggatg
      181 cagaagagga ggagggcgat ggcacccctg gctcaggccc cattctgccc cctacatccc
      241 ccatggaatg tcttatctgc gtgtcaccct tcgacggcat tttcaagctg cctaaacgcc
      301 tggactgcgg tcacgtattc tgtctcgagt gcctggcacg cctgtcgctg gctactgcgg
      361 gtggcggcga tgcagtggct tgccccatgt gccgcgcgcc cacacgcttg gccccgcgcc
      421 gggggctgcc cgctctgccc acacagcccg gtttgctgcc tcgcgatgcg cgcgcgccac
      481 tgccacgcca gggttctgtg cgctttgacc gacgccgggg tctcctgtac ctgcggccac
      541 caccgccgtc tcccgggccg cgaaagagcc gcacagtgcg tgccccaccg cctccacccc
      601 cgcttcgcct cggccgcccg ctgtcacgtc gcctgtccct gagcagtcca gcatgggctt
      661 tcaacgcagc agtggcgcta gctgtgctgg tggccgcggg tctcgtggtt tctggtgtgt
      721 acatcttttt cctcattcct catgtcacca attccggtgt gcggcctcag actgtggcgc
      781 tggcccccga aaatgacttc tgggtttcac cgcggcccac gccagtggcg ccctggaccc
      841 atgcctggac acgacgcccc acaaagcctg acctggacct ggacgatacc ctgccagagg
      901 ctaccaagga cacgcccgag cttgaggagg ctaccaaaga cccagtagag actcagggga
      961 tcccggattt accaccagat caaacaccaa aggcagagat tgatcttaac tggaacccga
     1021 aggctcaggc tgatgggaag aaggtgcaat tgcagcaata aatgcctcca cgctgcaggc
     1081 ccagtctcct ggcctgaggg acttctgtgt catcccggaa ggcagtaaca aaatgcatac
     1141 taaagtgccc atttctcgga attggggact ggaaagacat gaactctttc aaaccatgct
     1201 acaagaatcc tctgaggaca tctttaattc ccgtgaccat ccagctaaag gtactctctc
     1261 tggccatgac cttaatgaac ggcatacctt tgtaggtcta gatggggtgc ccctgatgtt
     1321 catctctgtg gaagtccagc cggcctcttc cccagtgtca tctacacaga actgtgtcag
     1381 ggtcctttag cattggtctt gatggaaggc tgttaggagc actttaagtt ataccagcac
     1441 agacccctgc tggagacact cctggccagc tctggggact gaaggatctg atctactcat
     1501 cctttgggct cgccgcaggg gcttggggca cccatctggg tagcacaaaa cagctgttct
     1561 gctcatgcat cctccttccc acagccagtc tgtaaacttc agcacttgca cacctgacca
     1621 agattccaaa ttggaggggc gaatgtggac tggctagggc tggggaaagc cttgactcct
     1681 gaagactggc tcccaattga gatgtcaatt ccaaattgat ctaggaactt ctctggactt
     1741 cggttcctgg gtctgatgca atatgttgtg gactaattgt tgtcatcaag gcttagagag
     1801 ccaaggcctc ctgtagctca gacagaaata ttcaatgagg gaaggtctgg tcctccctag
     1861 ctaacatgag aaatgctgtt agctactccc gggctccatc agctctgcgt agccttcctt
     1921 ctgcctcagc taaagtctaa gtctttccag tgttcacctc tgtggtagat gtctcctgtc
     1981 tttctcccaa aagccttctt tgcttagaca gagtaggagg aaggcagcta ctctctgcat
     2041 aggctgatca aagggcctct gaaaaccatg tcctacctca cctcacctgg caagagacac
     2101 ggtatattaa gggtgggcag cgttttccag aatgaaatgt gacttctatg tatctggagg
     2161 cttctgagtg gtttatttac ctgtatgtcc tcagcaccag gcatcagttg attcagaaca
     2221 gttgccaggg agtgactgca tcatggatga cggaggcagc ctgggaatgc caacaggcac
     2281 actaagcttg taagctccca gctgccatgg gccccagcat gtctgttgga gcaactcagc
     2341 tgcttcttcc aggtatgaaa ccagaggaag aacatcaggg aacccagggg tgtatcttcc
     2401 cagaccagtt cttggctcac acttgggtgc caacatcacc cacagggctg ggatcaatgc
     2461 actggatcac tggaaccaca ctgcccagct tcacaggctg atccagaggg gagcagagtg
     2521 agtggtctgg gttagtttcc tctggctagt ttaacaactt atccccaact ctatgtctta
     2581 gagccacata cattacctca cagttctgca gtccagaagt ctaaaatcct atcatggggc
     2641 aaaaactgaa gtacctggaa gatagaggca ggaagaccag gagttcaagg ctacaagtga
     2701 gtttgaggcc agcgcggtta caagagatcc tgtcttaaaa taaaaaccaa tcatcaatca
     2761 ataaagttag ggagccaaca gtcccatgtc ctcctgaaga ctctgaggga ttctatttct
     2821 tagttttcca gtttctagac tgccttcctt ggcttgtggt tccctcaaat ccagcatcaa
     2881 aacatcatca tatgtccttg acattggagc tatcttcttt cacttataaa aacattagga
     2941 atgctcgctt cggcagcacg tatactaaaa ttggaacgat acagggaaga ttagcatggc
     3001 ccctgcgcaa ggatgacacg aaaattcgtg aagcgttaaa aaaaaaaaag gaatatactg
     3061 gacccatcta tccagacaat caaagacaat tacccaactc aagatttgtg tatgggggta
     3121 cgggagatgc tgggcattga acccaagtgc tcacaaacgc taagcaccct tctactgatc
     3181 tacattccag tcattttttg aatttttatt tatactttta attaaaaatt ttaattatga
     3241 aaaaaaaaaa aaaaaaa
//
